Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 AC156016.1-201ENSMUST00000227190 1035 ntBASIC20.87■□□□□ 0.93
Pcdhb9E9Q5G2 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhb9E9Q5G2 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhb9E9Q5G2 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhb9E9Q5G2 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
Pcdhb9E9Q5G2 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhb9E9Q5G2 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhb9E9Q5G2 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhb9E9Q5G2 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhb9E9Q5G2 Odf3b-204ENSMUST00000227834 930 ntBASIC20.86■□□□□ 0.93
Pcdhb9E9Q5G2 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhb9E9Q5G2 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC20.86■□□□□ 0.93
Pcdhb9E9Q5G2 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhb9E9Q5G2 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Pcdhb9E9Q5G2 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC20.86■□□□□ 0.93
Pcdhb9E9Q5G2 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhb9E9Q5G2 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhb9E9Q5G2 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhb9E9Q5G2 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhb9E9Q5G2 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Pcdhb9E9Q5G2 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Pcdhb9E9Q5G2 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhb9E9Q5G2 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC20.85■□□□□ 0.93
Pcdhb9E9Q5G2 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhb9E9Q5G2 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC20.85■□□□□ 0.93
Pcdhb9E9Q5G2 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhb9E9Q5G2 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC20.85■□□□□ 0.93
Pcdhb9E9Q5G2 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhb9E9Q5G2 Arhgef4-208ENSMUST00000211073 171 ntBASIC20.85■□□□□ 0.93
Pcdhb9E9Q5G2 Timm23-208ENSMUST00000226683 750 ntBASIC20.85■□□□□ 0.93
Pcdhb9E9Q5G2 Otx2os1-204ENSMUST00000227221 751 ntBASIC20.85■□□□□ 0.93
Pcdhb9E9Q5G2 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Pcdhb9E9Q5G2 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC20.85■□□□□ 0.93
Pcdhb9E9Q5G2 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhb9E9Q5G2 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhb9E9Q5G2 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhb9E9Q5G2 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhb9E9Q5G2 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhb9E9Q5G2 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC20.84■□□□□ 0.93
Pcdhb9E9Q5G2 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhb9E9Q5G2 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhb9E9Q5G2 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhb9E9Q5G2 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC20.84■□□□□ 0.93
Pcdhb9E9Q5G2 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC20.84■□□□□ 0.93
Pcdhb9E9Q5G2 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhb9E9Q5G2 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhb9E9Q5G2 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhb9E9Q5G2 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhb9E9Q5G2 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhb9E9Q5G2 Gm42939-201ENSMUST00000197514 2205 ntBASIC20.84■□□□□ 0.93
Pcdhb9E9Q5G2 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Pcdhb9E9Q5G2 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdhb9E9Q5G2 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Pcdhb9E9Q5G2 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdhb9E9Q5G2 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdhb9E9Q5G2 Gm9694-201ENSMUST00000193347 1189 ntBASIC20.83■□□□□ 0.93
Pcdhb9E9Q5G2 Gm3375-201ENSMUST00000203929 796 ntBASIC20.83■□□□□ 0.93
Pcdhb9E9Q5G2 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdhb9E9Q5G2 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Pcdhb9E9Q5G2 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Pcdhb9E9Q5G2 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Pcdhb9E9Q5G2 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Pcdhb9E9Q5G2 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhb9E9Q5G2 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhb9E9Q5G2 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhb9E9Q5G2 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhb9E9Q5G2 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Pcdhb9E9Q5G2 Gm12085-201ENSMUST00000119263 940 ntBASIC20.82■□□□□ 0.92
Pcdhb9E9Q5G2 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhb9E9Q5G2 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhb9E9Q5G2 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhb9E9Q5G2 Gm5417-201ENSMUST00000079706 384 ntBASIC20.82■□□□□ 0.92
Pcdhb9E9Q5G2 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhb9E9Q5G2 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhb9E9Q5G2 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhb9E9Q5G2 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhb9E9Q5G2 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhb9E9Q5G2 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhb9E9Q5G2 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC20.81■□□□□ 0.92
Pcdhb9E9Q5G2 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhb9E9Q5G2 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhb9E9Q5G2 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC20.81■□□□□ 0.92
Pcdhb9E9Q5G2 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Pcdhb9E9Q5G2 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhb9E9Q5G2 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
Pcdhb9E9Q5G2 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhb9E9Q5G2 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhb9E9Q5G2 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhb9E9Q5G2 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhb9E9Q5G2 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Pcdhb9E9Q5G2 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhb9E9Q5G2 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Pcdhb9E9Q5G2 Gm20472-201ENSMUST00000174403 1240 ntBASIC20.8■□□□□ 0.92
Pcdhb9E9Q5G2 Mir8112-201ENSMUST00000184382 131 ntBASIC20.8■□□□□ 0.92
Pcdhb9E9Q5G2 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhb9E9Q5G2 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhb9E9Q5G2 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhb9E9Q5G2 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhb9E9Q5G2 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhb9E9Q5G2 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms