Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.32■□□□□ 0.52
Col4a6B1AVK5 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC18.31■□□□□ 0.52
Col4a6B1AVK5 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC18.31■□□□□ 0.52
Col4a6B1AVK5 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Col4a6B1AVK5 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col4a6B1AVK5 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.31■□□□□ 0.52
Col4a6B1AVK5 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col4a6B1AVK5 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Col4a6B1AVK5 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Col4a6B1AVK5 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col4a6B1AVK5 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col4a6B1AVK5 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Col4a6B1AVK5 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col4a6B1AVK5 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Col4a6B1AVK5 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col4a6B1AVK5 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Col4a6B1AVK5 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
Col4a6B1AVK5 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC18.31■□□□□ 0.52
Col4a6B1AVK5 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC18.31■□□□□ 0.52
Col4a6B1AVK5 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col4a6B1AVK5 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col4a6B1AVK5 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.31■□□□□ 0.52
Col4a6B1AVK5 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.31■□□□□ 0.52
Col4a6B1AVK5 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col4a6B1AVK5 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Col4a6B1AVK5 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.3■□□□□ 0.52
Col4a6B1AVK5 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Col4a6B1AVK5 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
Col4a6B1AVK5 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col4a6B1AVK5 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC18.3■□□□□ 0.52
Col4a6B1AVK5 AC133598.3-202ENSMUST00000224219 531 ntBASIC18.3■□□□□ 0.52
Col4a6B1AVK5 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Col4a6B1AVK5 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Col4a6B1AVK5 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col4a6B1AVK5 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col4a6B1AVK5 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
Col4a6B1AVK5 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
Col4a6B1AVK5 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col4a6B1AVK5 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col4a6B1AVK5 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col4a6B1AVK5 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Col4a6B1AVK5 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col4a6B1AVK5 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col4a6B1AVK5 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Col4a6B1AVK5 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
Col4a6B1AVK5 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col4a6B1AVK5 Mir8112-201ENSMUST00000184382 131 ntBASIC18.29■□□□□ 0.52
Col4a6B1AVK5 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col4a6B1AVK5 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col4a6B1AVK5 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col4a6B1AVK5 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col4a6B1AVK5 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col4a6B1AVK5 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Col4a6B1AVK5 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col4a6B1AVK5 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col4a6B1AVK5 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Col4a6B1AVK5 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Col4a6B1AVK5 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Col4a6B1AVK5 Gm34391-201ENSMUST00000203706 907 ntBASIC18.28■□□□□ 0.52
Col4a6B1AVK5 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.28■□□□□ 0.52
Col4a6B1AVK5 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC18.28■□□□□ 0.52
Col4a6B1AVK5 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col4a6B1AVK5 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col4a6B1AVK5 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col4a6B1AVK5 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Col4a6B1AVK5 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
Col4a6B1AVK5 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Col4a6B1AVK5 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Col4a6B1AVK5 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
Col4a6B1AVK5 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Col4a6B1AVK5 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Col4a6B1AVK5 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC18.27■□□□□ 0.52
Col4a6B1AVK5 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Col4a6B1AVK5 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Col4a6B1AVK5 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.27■□□□□ 0.51
Col4a6B1AVK5 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Col4a6B1AVK5 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col4a6B1AVK5 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Col4a6B1AVK5 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col4a6B1AVK5 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC18.26■□□□□ 0.51
Col4a6B1AVK5 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Col4a6B1AVK5 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col4a6B1AVK5 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
Col4a6B1AVK5 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC18.26■□□□□ 0.51
Col4a6B1AVK5 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Col4a6B1AVK5 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Col4a6B1AVK5 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.26■□□□□ 0.51
Col4a6B1AVK5 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col4a6B1AVK5 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Col4a6B1AVK5 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col4a6B1AVK5 Gm26039-201ENSMUST00000158152 144 ntBASIC18.25■□□□□ 0.51
Col4a6B1AVK5 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Col4a6B1AVK5 Gm44771-201ENSMUST00000206975 626 ntBASIC18.25■□□□□ 0.51
Col4a6B1AVK5 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC18.25■□□□□ 0.51
Col4a6B1AVK5 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Col4a6B1AVK5 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col4a6B1AVK5 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col4a6B1AVK5 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col4a6B1AVK5 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Col4a6B1AVK5 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms