Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col6a4A2AX52 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col6a4A2AX52 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col6a4A2AX52 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC14.88□□□□□ -0.03
Col6a4A2AX52 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col6a4A2AX52 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col6a4A2AX52 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col6a4A2AX52 Grk6-206ENSMUST00000224995 2971 ntBASIC14.88□□□□□ -0.03
Col6a4A2AX52 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col6a4A2AX52 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col6a4A2AX52 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col6a4A2AX52 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Col6a4A2AX52 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Col6a4A2AX52 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC14.88□□□□□ -0.03
Col6a4A2AX52 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Col6a4A2AX52 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col6a4A2AX52 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Col6a4A2AX52 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Col6a4A2AX52 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col6a4A2AX52 Gm21559-201ENSMUST00000220638 855 ntBASIC14.88□□□□□ -0.03
Col6a4A2AX52 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col6a4A2AX52 Gm8587-201ENSMUST00000076538 843 ntBASIC14.88□□□□□ -0.03
Col6a4A2AX52 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC14.88□□□□□ -0.03
Col6a4A2AX52 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col6a4A2AX52 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Col6a4A2AX52 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Col6a4A2AX52 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col6a4A2AX52 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col6a4A2AX52 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col6a4A2AX52 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col6a4A2AX52 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC14.87□□□□□ -0.03
Col6a4A2AX52 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col6a4A2AX52 Gm7638-201ENSMUST00000121348 967 ntBASIC14.87□□□□□ -0.03
Col6a4A2AX52 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Col6a4A2AX52 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col6a4A2AX52 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col6a4A2AX52 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Col6a4A2AX52 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col6a4A2AX52 Hsf1-207ENSMUST00000228371 2102 ntBASIC14.87□□□□□ -0.03
Col6a4A2AX52 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col6a4A2AX52 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Col6a4A2AX52 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col6a4A2AX52 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Col6a4A2AX52 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Col6a4A2AX52 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC14.87□□□□□ -0.03
Col6a4A2AX52 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC14.87□□□□□ -0.03
Col6a4A2AX52 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Col6a4A2AX52 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Col6a4A2AX52 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC14.87□□□□□ -0.03
Col6a4A2AX52 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col6a4A2AX52 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Col6a4A2AX52 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a4A2AX52 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a4A2AX52 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a4A2AX52 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a4A2AX52 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Col6a4A2AX52 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a4A2AX52 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a4A2AX52 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a4A2AX52 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a4A2AX52 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Col6a4A2AX52 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a4A2AX52 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a4A2AX52 Mir5130-201ENSMUST00000175160 84 ntBASIC14.86□□□□□ -0.03
Col6a4A2AX52 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a4A2AX52 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Col6a4A2AX52 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col6a4A2AX52 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Col6a4A2AX52 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col6a4A2AX52 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Col6a4A2AX52 Mir2861-201ENSMUST00000175539 82 ntBASIC14.85□□□□□ -0.03
Col6a4A2AX52 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC14.85□□□□□ -0.03
Col6a4A2AX52 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC14.85□□□□□ -0.03
Col6a4A2AX52 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col6a4A2AX52 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col6a4A2AX52 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col6a4A2AX52 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
Col6a4A2AX52 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col6a4A2AX52 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Col6a4A2AX52 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col6a4A2AX52 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col6a4A2AX52 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col6a4A2AX52 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col6a4A2AX52 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col6a4A2AX52 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Col6a4A2AX52 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Col6a4A2AX52 Gm18669-201ENSMUST00000216049 778 ntBASIC14.84□□□□□ -0.03
Col6a4A2AX52 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Col6a4A2AX52 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col6a4A2AX52 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col6a4A2AX52 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col6a4A2AX52 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col6a4A2AX52 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col6a4A2AX52 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col6a4A2AX52 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC14.84□□□□□ -0.03
Col6a4A2AX52 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col6a4A2AX52 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col6a4A2AX52 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC14.84□□□□□ -0.03
Col6a4A2AX52 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC14.84□□□□□ -0.03
Col6a4A2AX52 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms