Protein–RNA interactions for Protein: A2ALU4

Shroom2, Protein Shroom2, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom2A2ALU4 AC158982.1-201ENSMUST00000228377 901 ntBASIC28.15■■■□□ 2.1
Shroom2A2ALU4 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC28.15■■■□□ 2.1
Shroom2A2ALU4 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Shroom2A2ALU4 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC28.14■■■□□ 2.1
Shroom2A2ALU4 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC28.14■■■□□ 2.1
Shroom2A2ALU4 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Shroom2A2ALU4 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC28.14■■■□□ 2.09
Shroom2A2ALU4 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC28.14■■■□□ 2.09
Shroom2A2ALU4 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC28.14■■■□□ 2.09
Shroom2A2ALU4 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC28.14■■■□□ 2.09
Shroom2A2ALU4 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
Shroom2A2ALU4 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Shroom2A2ALU4 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Shroom2A2ALU4 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Shroom2A2ALU4 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
Shroom2A2ALU4 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC28.13■■■□□ 2.09
Shroom2A2ALU4 Gm15920-201ENSMUST00000118998 402 ntBASIC28.13■■■□□ 2.09
Shroom2A2ALU4 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC28.13■■■□□ 2.09
Shroom2A2ALU4 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC28.13■■■□□ 2.09
Shroom2A2ALU4 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Shroom2A2ALU4 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Shroom2A2ALU4 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Shroom2A2ALU4 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Shroom2A2ALU4 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
Shroom2A2ALU4 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
Shroom2A2ALU4 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC28.12■■■□□ 2.09
Shroom2A2ALU4 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
Shroom2A2ALU4 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC28.12■■■□□ 2.09
Shroom2A2ALU4 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC28.12■■■□□ 2.09
Shroom2A2ALU4 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Shroom2A2ALU4 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC28.12■■■□□ 2.09
Shroom2A2ALU4 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Shroom2A2ALU4 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC28.12■■■□□ 2.09
Shroom2A2ALU4 Gm27397-201ENSMUST00000184997 107 ntBASIC28.12■■■□□ 2.09
Shroom2A2ALU4 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC28.12■■■□□ 2.09
Shroom2A2ALU4 Gm10060-201ENSMUST00000212002 111 ntBASIC28.12■■■□□ 2.09
Shroom2A2ALU4 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
Shroom2A2ALU4 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC28.12■■■□□ 2.09
Shroom2A2ALU4 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC28.12■■■□□ 2.09
Shroom2A2ALU4 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC28.12■■■□□ 2.09
Shroom2A2ALU4 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Shroom2A2ALU4 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC28.11■■■□□ 2.09
Shroom2A2ALU4 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC28.11■■■□□ 2.09
Shroom2A2ALU4 Gm6296-201ENSMUST00000222599 943 ntBASIC28.11■■■□□ 2.09
Shroom2A2ALU4 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Shroom2A2ALU4 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Shroom2A2ALU4 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC28.11■■■□□ 2.09
Shroom2A2ALU4 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC28.11■■■□□ 2.09
Shroom2A2ALU4 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC28.11■■■□□ 2.09
Shroom2A2ALU4 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
Shroom2A2ALU4 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC28.1■■■□□ 2.09
Shroom2A2ALU4 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC28.1■■■□□ 2.09
Shroom2A2ALU4 Gm14822-201ENSMUST00000122247 291 ntBASIC28.1■■■□□ 2.09
Shroom2A2ALU4 AC120002.2-201ENSMUST00000220205 773 ntBASIC28.1■■■□□ 2.09
Shroom2A2ALU4 AC225888.1-201ENSMUST00000227184 728 ntBASIC28.1■■■□□ 2.09
Shroom2A2ALU4 Psmb5-202ENSMUST00000227257 622 ntBASIC28.1■■■□□ 2.09
Shroom2A2ALU4 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Shroom2A2ALU4 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC28.1■■■□□ 2.09
Shroom2A2ALU4 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC28.1■■■□□ 2.09
Shroom2A2ALU4 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Shroom2A2ALU4 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Shroom2A2ALU4 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
Shroom2A2ALU4 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC28.09■■■□□ 2.09
Shroom2A2ALU4 Gm44357-201ENSMUST00000195897 142 ntBASIC28.09■■■□□ 2.09
Shroom2A2ALU4 Gm19658-201ENSMUST00000196231 138 ntBASIC28.09■■■□□ 2.09
Shroom2A2ALU4 Gm44367-201ENSMUST00000196836 138 ntBASIC28.09■■■□□ 2.09
Shroom2A2ALU4 Gm44350-201ENSMUST00000197197 138 ntBASIC28.09■■■□□ 2.09
Shroom2A2ALU4 Gm44390-201ENSMUST00000197533 144 ntBASIC28.09■■■□□ 2.09
Shroom2A2ALU4 Gm44313-201ENSMUST00000198018 138 ntBASIC28.09■■■□□ 2.09
Shroom2A2ALU4 Gm44486-201ENSMUST00000198508 138 ntBASIC28.09■■■□□ 2.09
Shroom2A2ALU4 Gm44454-201ENSMUST00000198541 138 ntBASIC28.09■■■□□ 2.09
Shroom2A2ALU4 Gm44314-201ENSMUST00000199263 138 ntBASIC28.09■■■□□ 2.09
Shroom2A2ALU4 Gm44394-201ENSMUST00000199558 138 ntBASIC28.09■■■□□ 2.09
Shroom2A2ALU4 Gm44484-201ENSMUST00000199873 138 ntBASIC28.09■■■□□ 2.09
Shroom2A2ALU4 Gm44466-201ENSMUST00000200264 138 ntBASIC28.09■■■□□ 2.09
Shroom2A2ALU4 Gm44359-201ENSMUST00000200671 138 ntBASIC28.09■■■□□ 2.09
Shroom2A2ALU4 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC28.09■■■□□ 2.09
Shroom2A2ALU4 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Shroom2A2ALU4 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Shroom2A2ALU4 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC28.09■■■□□ 2.09
Shroom2A2ALU4 AC108858.1-201ENSMUST00000228461 1498 ntBASIC28.09■■■□□ 2.09
Shroom2A2ALU4 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Shroom2A2ALU4 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC28.08■■■□□ 2.09
Shroom2A2ALU4 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC28.08■■■□□ 2.09
Shroom2A2ALU4 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
Shroom2A2ALU4 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC28.08■■■□□ 2.09
Shroom2A2ALU4 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC28.08■■■□□ 2.09
Shroom2A2ALU4 Gm12644-201ENSMUST00000119935 606 ntBASIC28.08■■■□□ 2.09
Shroom2A2ALU4 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
Shroom2A2ALU4 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
Shroom2A2ALU4 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
Shroom2A2ALU4 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC28.08■■■□□ 2.09
Shroom2A2ALU4 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC28.08■■■□□ 2.08
Shroom2A2ALU4 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC28.07■■■□□ 2.08
Shroom2A2ALU4 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC28.07■■■□□ 2.08
Shroom2A2ALU4 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
Shroom2A2ALU4 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC28.07■■■□□ 2.08
Shroom2A2ALU4 Gm37025-201ENSMUST00000195159 829 ntBASIC28.07■■■□□ 2.08
Shroom2A2ALU4 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
Shroom2A2ALU4 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC28.07■■■□□ 2.08
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms