Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Gm5075-201ENSMUST00000196916 622 ntBASIC17.63■□□□□ 0.41
Ccdc194A0A140LIT1 Gm42569-201ENSMUST00000200539 472 ntBASIC17.63■□□□□ 0.41
Ccdc194A0A140LIT1 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.63■□□□□ 0.41
Ccdc194A0A140LIT1 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.63■□□□□ 0.41
Ccdc194A0A140LIT1 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc194A0A140LIT1 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc194A0A140LIT1 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc194A0A140LIT1 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.63■□□□□ 0.41
Ccdc194A0A140LIT1 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.63■□□□□ 0.41
Ccdc194A0A140LIT1 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Ccdc194A0A140LIT1 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.63■□□□□ 0.41
Ccdc194A0A140LIT1 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc194A0A140LIT1 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc194A0A140LIT1 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc194A0A140LIT1 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc194A0A140LIT1 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.62■□□□□ 0.41
Ccdc194A0A140LIT1 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Ccdc194A0A140LIT1 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.62■□□□□ 0.41
Ccdc194A0A140LIT1 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Ccdc194A0A140LIT1 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc194A0A140LIT1 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc194A0A140LIT1 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc194A0A140LIT1 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc194A0A140LIT1 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.62■□□□□ 0.41
Ccdc194A0A140LIT1 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Ccdc194A0A140LIT1 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc194A0A140LIT1 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc194A0A140LIT1 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc194A0A140LIT1 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Ccdc194A0A140LIT1 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc194A0A140LIT1 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc194A0A140LIT1 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc194A0A140LIT1 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.61■□□□□ 0.41
Ccdc194A0A140LIT1 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc194A0A140LIT1 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
Ccdc194A0A140LIT1 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc194A0A140LIT1 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc194A0A140LIT1 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Ccdc194A0A140LIT1 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc194A0A140LIT1 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc194A0A140LIT1 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.6■□□□□ 0.41
Ccdc194A0A140LIT1 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc194A0A140LIT1 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc194A0A140LIT1 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc194A0A140LIT1 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc194A0A140LIT1 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Ccdc194A0A140LIT1 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc194A0A140LIT1 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.6■□□□□ 0.41
Ccdc194A0A140LIT1 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc194A0A140LIT1 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc194A0A140LIT1 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc194A0A140LIT1 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc194A0A140LIT1 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc194A0A140LIT1 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc194A0A140LIT1 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.6■□□□□ 0.41
Ccdc194A0A140LIT1 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc194A0A140LIT1 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc194A0A140LIT1 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc194A0A140LIT1 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
Ccdc194A0A140LIT1 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc194A0A140LIT1 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc194A0A140LIT1 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc194A0A140LIT1 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc194A0A140LIT1 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc194A0A140LIT1 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc194A0A140LIT1 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc194A0A140LIT1 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.59■□□□□ 0.41
Ccdc194A0A140LIT1 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc194A0A140LIT1 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Ccdc194A0A140LIT1 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc194A0A140LIT1 Gm6211-202ENSMUST00000167849 925 ntBASIC17.59■□□□□ 0.41
Ccdc194A0A140LIT1 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc194A0A140LIT1 Gm7291-201ENSMUST00000199147 382 ntBASIC17.59■□□□□ 0.41
Ccdc194A0A140LIT1 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.59■□□□□ 0.41
Ccdc194A0A140LIT1 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc194A0A140LIT1 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Ccdc194A0A140LIT1 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc194A0A140LIT1 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc194A0A140LIT1 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Ccdc194A0A140LIT1 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Ccdc194A0A140LIT1 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc194A0A140LIT1 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc194A0A140LIT1 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc194A0A140LIT1 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Ccdc194A0A140LIT1 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ccdc194A0A140LIT1 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ccdc194A0A140LIT1 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Ccdc194A0A140LIT1 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ccdc194A0A140LIT1 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ccdc194A0A140LIT1 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Ccdc194A0A140LIT1 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Ccdc194A0A140LIT1 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc194A0A140LIT1 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Ccdc194A0A140LIT1 Gm10849-201ENSMUST00000100397 618 ntBASIC17.58■□□□□ 0.4
Ccdc194A0A140LIT1 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc194A0A140LIT1 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.58■□□□□ 0.4
Ccdc194A0A140LIT1 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc194A0A140LIT1 Gm26571-201ENSMUST00000181399 666 ntBASIC17.58■□□□□ 0.4
Ccdc194A0A140LIT1 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.58■□□□□ 0.4
Ccdc194A0A140LIT1 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms