Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC14.36□□□□□ -0.11
Trav13n-4A0A0G2JG01 Gm22325-201ENSMUST00000158904 308 ntBASIC14.36□□□□□ -0.11
Trav13n-4A0A0G2JG01 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trav13n-4A0A0G2JG01 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Trav13n-4A0A0G2JG01 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Trav13n-4A0A0G2JG01 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav13n-4A0A0G2JG01 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav13n-4A0A0G2JG01 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC14.36□□□□□ -0.11
Trav13n-4A0A0G2JG01 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trav13n-4A0A0G2JG01 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav13n-4A0A0G2JG01 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav13n-4A0A0G2JG01 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav13n-4A0A0G2JG01 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Trav13n-4A0A0G2JG01 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav13n-4A0A0G2JG01 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav13n-4A0A0G2JG01 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav13n-4A0A0G2JG01 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav13n-4A0A0G2JG01 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav13n-4A0A0G2JG01 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav13n-4A0A0G2JG01 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav13n-4A0A0G2JG01 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav13n-4A0A0G2JG01 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav13n-4A0A0G2JG01 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC14.35□□□□□ -0.11
Trav13n-4A0A0G2JG01 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav13n-4A0A0G2JG01 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav13n-4A0A0G2JG01 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav13n-4A0A0G2JG01 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav13n-4A0A0G2JG01 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav13n-4A0A0G2JG01 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trav13n-4A0A0G2JG01 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav13n-4A0A0G2JG01 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC14.35□□□□□ -0.11
Trav13n-4A0A0G2JG01 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC14.35□□□□□ -0.11
Trav13n-4A0A0G2JG01 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav13n-4A0A0G2JG01 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav13n-4A0A0G2JG01 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Trav13n-4A0A0G2JG01 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC14.35□□□□□ -0.11
Trav13n-4A0A0G2JG01 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Trav13n-4A0A0G2JG01 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav13n-4A0A0G2JG01 Gm5828-201ENSMUST00000071842 1860 ntBASIC14.35□□□□□ -0.11
Trav13n-4A0A0G2JG01 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav13n-4A0A0G2JG01 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav13n-4A0A0G2JG01 Gm42900-201ENSMUST00000197184 2167 ntBASIC14.34□□□□□ -0.11
Trav13n-4A0A0G2JG01 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav13n-4A0A0G2JG01 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav13n-4A0A0G2JG01 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trav13n-4A0A0G2JG01 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav13n-4A0A0G2JG01 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav13n-4A0A0G2JG01 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
Trav13n-4A0A0G2JG01 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav13n-4A0A0G2JG01 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav13n-4A0A0G2JG01 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav13n-4A0A0G2JG01 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Trav13n-4A0A0G2JG01 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC14.34□□□□□ -0.11
Trav13n-4A0A0G2JG01 Gm9954-202ENSMUST00000198686 4725 ntBASIC14.34□□□□□ -0.11
Trav13n-4A0A0G2JG01 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trav13n-4A0A0G2JG01 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav13n-4A0A0G2JG01 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trav13n-4A0A0G2JG01 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trav13n-4A0A0G2JG01 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Trav13n-4A0A0G2JG01 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav13n-4A0A0G2JG01 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trav13n-4A0A0G2JG01 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav13n-4A0A0G2JG01 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trav13n-4A0A0G2JG01 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Trav13n-4A0A0G2JG01 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav13n-4A0A0G2JG01 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav13n-4A0A0G2JG01 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav13n-4A0A0G2JG01 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav13n-4A0A0G2JG01 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Trav13n-4A0A0G2JG01 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav13n-4A0A0G2JG01 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav13n-4A0A0G2JG01 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trav13n-4A0A0G2JG01 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav13n-4A0A0G2JG01 Gm2559-201ENSMUST00000201323 363 ntBASIC14.33□□□□□ -0.12
Trav13n-4A0A0G2JG01 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC14.33□□□□□ -0.12
Trav13n-4A0A0G2JG01 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav13n-4A0A0G2JG01 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Trav13n-4A0A0G2JG01 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav13n-4A0A0G2JG01 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav13n-4A0A0G2JG01 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav13n-4A0A0G2JG01 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav13n-4A0A0G2JG01 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav13n-4A0A0G2JG01 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav13n-4A0A0G2JG01 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Trav13n-4A0A0G2JG01 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav13n-4A0A0G2JG01 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav13n-4A0A0G2JG01 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trav13n-4A0A0G2JG01 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav13n-4A0A0G2JG01 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav13n-4A0A0G2JG01 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav13n-4A0A0G2JG01 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav13n-4A0A0G2JG01 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav13n-4A0A0G2JG01 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav13n-4A0A0G2JG01 Gm38308-201ENSMUST00000194934 1809 ntBASIC14.32□□□□□ -0.12
Trav13n-4A0A0G2JG01 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav13n-4A0A0G2JG01 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Trav13n-4A0A0G2JG01 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Trav13n-4A0A0G2JG01 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav13n-4A0A0G2JG01 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav13n-4A0A0G2JG01 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms