Protein–RNA interactions for Protein: A0A0G2JEW2

Tcrg-V3, T cell receptor gamma, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcrg-V3A0A0G2JEW2 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Tcrg-V3A0A0G2JEW2 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.11■□□□□ 0.33
Tcrg-V3A0A0G2JEW2 Timm23-208ENSMUST00000226683 750 ntBASIC17.11■□□□□ 0.33
Tcrg-V3A0A0G2JEW2 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tcrg-V3A0A0G2JEW2 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Tcrg-V3A0A0G2JEW2 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tcrg-V3A0A0G2JEW2 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Tcrg-V3A0A0G2JEW2 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tcrg-V3A0A0G2JEW2 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tcrg-V3A0A0G2JEW2 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tcrg-V3A0A0G2JEW2 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tcrg-V3A0A0G2JEW2 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tcrg-V3A0A0G2JEW2 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tcrg-V3A0A0G2JEW2 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tcrg-V3A0A0G2JEW2 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tcrg-V3A0A0G2JEW2 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tcrg-V3A0A0G2JEW2 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tcrg-V3A0A0G2JEW2 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tcrg-V3A0A0G2JEW2 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Tcrg-V3A0A0G2JEW2 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Tcrg-V3A0A0G2JEW2 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Tcrg-V3A0A0G2JEW2 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Tcrg-V3A0A0G2JEW2 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tcrg-V3A0A0G2JEW2 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.1■□□□□ 0.33
Tcrg-V3A0A0G2JEW2 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.1■□□□□ 0.33
Tcrg-V3A0A0G2JEW2 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.1■□□□□ 0.33
Tcrg-V3A0A0G2JEW2 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tcrg-V3A0A0G2JEW2 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tcrg-V3A0A0G2JEW2 Gm5417-201ENSMUST00000079706 384 ntBASIC17.1■□□□□ 0.33
Tcrg-V3A0A0G2JEW2 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tcrg-V3A0A0G2JEW2 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Tcrg-V3A0A0G2JEW2 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tcrg-V3A0A0G2JEW2 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tcrg-V3A0A0G2JEW2 Idnk-204ENSMUST00000226010 1898 ntBASIC17.1■□□□□ 0.33
Tcrg-V3A0A0G2JEW2 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tcrg-V3A0A0G2JEW2 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tcrg-V3A0A0G2JEW2 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.09■□□□□ 0.33
Tcrg-V3A0A0G2JEW2 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.09■□□□□ 0.33
Tcrg-V3A0A0G2JEW2 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tcrg-V3A0A0G2JEW2 Gm4974-201ENSMUST00000209974 875 ntBASIC17.09■□□□□ 0.33
Tcrg-V3A0A0G2JEW2 Odf3b-204ENSMUST00000227834 930 ntBASIC17.09■□□□□ 0.33
Tcrg-V3A0A0G2JEW2 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Tcrg-V3A0A0G2JEW2 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tcrg-V3A0A0G2JEW2 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Tcrg-V3A0A0G2JEW2 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.09■□□□□ 0.33
Tcrg-V3A0A0G2JEW2 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.09■□□□□ 0.33
Tcrg-V3A0A0G2JEW2 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tcrg-V3A0A0G2JEW2 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tcrg-V3A0A0G2JEW2 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tcrg-V3A0A0G2JEW2 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tcrg-V3A0A0G2JEW2 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tcrg-V3A0A0G2JEW2 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tcrg-V3A0A0G2JEW2 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tcrg-V3A0A0G2JEW2 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tcrg-V3A0A0G2JEW2 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Tcrg-V3A0A0G2JEW2 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Tcrg-V3A0A0G2JEW2 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.08■□□□□ 0.32
Tcrg-V3A0A0G2JEW2 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.08■□□□□ 0.32
Tcrg-V3A0A0G2JEW2 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.08■□□□□ 0.32
Tcrg-V3A0A0G2JEW2 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.08■□□□□ 0.32
Tcrg-V3A0A0G2JEW2 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tcrg-V3A0A0G2JEW2 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.07■□□□□ 0.32
Tcrg-V3A0A0G2JEW2 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tcrg-V3A0A0G2JEW2 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tcrg-V3A0A0G2JEW2 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tcrg-V3A0A0G2JEW2 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.07■□□□□ 0.32
Tcrg-V3A0A0G2JEW2 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.07■□□□□ 0.32
Tcrg-V3A0A0G2JEW2 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Tcrg-V3A0A0G2JEW2 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
Tcrg-V3A0A0G2JEW2 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tcrg-V3A0A0G2JEW2 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
Tcrg-V3A0A0G2JEW2 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.07■□□□□ 0.32
Tcrg-V3A0A0G2JEW2 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.07■□□□□ 0.32
Tcrg-V3A0A0G2JEW2 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tcrg-V3A0A0G2JEW2 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.07■□□□□ 0.32
Tcrg-V3A0A0G2JEW2 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Tcrg-V3A0A0G2JEW2 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tcrg-V3A0A0G2JEW2 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tcrg-V3A0A0G2JEW2 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tcrg-V3A0A0G2JEW2 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tcrg-V3A0A0G2JEW2 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tcrg-V3A0A0G2JEW2 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tcrg-V3A0A0G2JEW2 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tcrg-V3A0A0G2JEW2 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Tcrg-V3A0A0G2JEW2 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Tcrg-V3A0A0G2JEW2 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tcrg-V3A0A0G2JEW2 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tcrg-V3A0A0G2JEW2 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Tcrg-V3A0A0G2JEW2 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tcrg-V3A0A0G2JEW2 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tcrg-V3A0A0G2JEW2 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tcrg-V3A0A0G2JEW2 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tcrg-V3A0A0G2JEW2 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tcrg-V3A0A0G2JEW2 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tcrg-V3A0A0G2JEW2 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Tcrg-V3A0A0G2JEW2 Gm15565-201ENSMUST00000118890 427 ntBASIC17.06■□□□□ 0.32
Tcrg-V3A0A0G2JEW2 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.06■□□□□ 0.32
Tcrg-V3A0A0G2JEW2 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.06■□□□□ 0.32
Tcrg-V3A0A0G2JEW2 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tcrg-V3A0A0G2JEW2 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms