Protein–RNA interactions for Protein: A0A0B4J1H0

Trbv12-1, T cell receptor beta, variable 12-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv12-1A0A0B4J1H0 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv12-1A0A0B4J1H0 Gm4974-201ENSMUST00000209974 875 ntBASIC15.63■□□□□ 0.09
Trbv12-1A0A0B4J1H0 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv12-1A0A0B4J1H0 AC154649.1-201ENSMUST00000227392 384 ntBASIC15.63■□□□□ 0.09
Trbv12-1A0A0B4J1H0 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv12-1A0A0B4J1H0 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv12-1A0A0B4J1H0 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv12-1A0A0B4J1H0 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv12-1A0A0B4J1H0 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv12-1A0A0B4J1H0 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv12-1A0A0B4J1H0 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv12-1A0A0B4J1H0 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv12-1A0A0B4J1H0 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC15.62■□□□□ 0.09
Trbv12-1A0A0B4J1H0 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv12-1A0A0B4J1H0 CT010444.2-201ENSMUST00000217877 1629 ntBASIC15.62■□□□□ 0.09
Trbv12-1A0A0B4J1H0 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC15.62■□□□□ 0.09
Trbv12-1A0A0B4J1H0 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Trbv12-1A0A0B4J1H0 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv12-1A0A0B4J1H0 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv12-1A0A0B4J1H0 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv12-1A0A0B4J1H0 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv12-1A0A0B4J1H0 Zcchc6-207ENSMUST00000225576 2499 ntBASIC15.62■□□□□ 0.09
Trbv12-1A0A0B4J1H0 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC15.62■□□□□ 0.09
Trbv12-1A0A0B4J1H0 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv12-1A0A0B4J1H0 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv12-1A0A0B4J1H0 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv12-1A0A0B4J1H0 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Trbv12-1A0A0B4J1H0 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv12-1A0A0B4J1H0 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC15.61■□□□□ 0.09
Trbv12-1A0A0B4J1H0 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv12-1A0A0B4J1H0 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv12-1A0A0B4J1H0 Rarb-207ENSMUST00000225921 2756 ntBASIC15.61■□□□□ 0.09
Trbv12-1A0A0B4J1H0 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv12-1A0A0B4J1H0 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv12-1A0A0B4J1H0 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC15.61■□□□□ 0.09
Trbv12-1A0A0B4J1H0 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv12-1A0A0B4J1H0 AC175538.1-201ENSMUST00000225343 1269 ntBASIC15.61■□□□□ 0.09
Trbv12-1A0A0B4J1H0 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Trbv12-1A0A0B4J1H0 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC15.61■□□□□ 0.09
Trbv12-1A0A0B4J1H0 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv12-1A0A0B4J1H0 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC15.61■□□□□ 0.09
Trbv12-1A0A0B4J1H0 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trbv12-1A0A0B4J1H0 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC15.6■□□□□ 0.09
Trbv12-1A0A0B4J1H0 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trbv12-1A0A0B4J1H0 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
Trbv12-1A0A0B4J1H0 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trbv12-1A0A0B4J1H0 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC15.6■□□□□ 0.09
Trbv12-1A0A0B4J1H0 Gm10517-202ENSMUST00000192970 758 ntBASIC15.6■□□□□ 0.09
Trbv12-1A0A0B4J1H0 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC15.6■□□□□ 0.09
Trbv12-1A0A0B4J1H0 AC153881.1-201ENSMUST00000214448 284 ntBASIC15.6■□□□□ 0.09
Trbv12-1A0A0B4J1H0 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trbv12-1A0A0B4J1H0 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trbv12-1A0A0B4J1H0 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC15.6■□□□□ 0.09
Trbv12-1A0A0B4J1H0 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trbv12-1A0A0B4J1H0 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trbv12-1A0A0B4J1H0 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Trbv12-1A0A0B4J1H0 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trbv12-1A0A0B4J1H0 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trbv12-1A0A0B4J1H0 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trbv12-1A0A0B4J1H0 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Trbv12-1A0A0B4J1H0 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv12-1A0A0B4J1H0 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv12-1A0A0B4J1H0 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC15.59■□□□□ 0.09
Trbv12-1A0A0B4J1H0 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC15.59■□□□□ 0.09
Trbv12-1A0A0B4J1H0 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv12-1A0A0B4J1H0 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv12-1A0A0B4J1H0 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv12-1A0A0B4J1H0 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv12-1A0A0B4J1H0 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv12-1A0A0B4J1H0 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv12-1A0A0B4J1H0 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv12-1A0A0B4J1H0 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv12-1A0A0B4J1H0 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv12-1A0A0B4J1H0 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC15.59■□□□□ 0.09
Trbv12-1A0A0B4J1H0 Mir1199-201ENSMUST00000117015 119 ntBASIC15.59■□□□□ 0.09
Trbv12-1A0A0B4J1H0 Gm5297-201ENSMUST00000198555 1171 ntBASIC15.59■□□□□ 0.09
Trbv12-1A0A0B4J1H0 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv12-1A0A0B4J1H0 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC15.59■□□□□ 0.09
Trbv12-1A0A0B4J1H0 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv12-1A0A0B4J1H0 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv12-1A0A0B4J1H0 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trbv12-1A0A0B4J1H0 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trbv12-1A0A0B4J1H0 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trbv12-1A0A0B4J1H0 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trbv12-1A0A0B4J1H0 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trbv12-1A0A0B4J1H0 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trbv12-1A0A0B4J1H0 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC15.58■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trbv12-1A0A0B4J1H0 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC15.58■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trbv12-1A0A0B4J1H0 AC112142.1-201ENSMUST00000228796 918 ntBASIC15.58■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trbv12-1A0A0B4J1H0 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms