Protein–RNA interactions for Protein: A0A0A6YWL2

Ighv3-3, Immunoglobulin heavy variable V3-3 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv3-3A0A0A6YWL2 Gm9954-202ENSMUST00000198686 4725 ntBASIC12.99□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ighv3-3A0A0A6YWL2 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC12.99□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC12.98□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC12.98□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC12.98□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Gm38285-201ENSMUST00000192928 922 ntBASIC12.98□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC12.98□□□□□ -0.33
Ighv3-3A0A0A6YWL2 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ighv3-3A0A0A6YWL2 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC12.98□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC12.98□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Gm37519-201ENSMUST00000191687 2210 ntBASIC12.98□□□□□ -0.33
Ighv3-3A0A0A6YWL2 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC12.98□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ighv3-3A0A0A6YWL2 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC12.97□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ighv3-3A0A0A6YWL2 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC12.97□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Gm43338-201ENSMUST00000198617 2223 ntBASIC12.97□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC12.97□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC12.96□□□□□ -0.33
Ighv3-3A0A0A6YWL2 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC12.96□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ighv3-3A0A0A6YWL2 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC12.96□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Gm10418-201ENSMUST00000100943 576 ntBASIC12.96□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC12.96□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Ighv3-3A0A0A6YWL2 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ighv3-3A0A0A6YWL2 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ighv3-3A0A0A6YWL2 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ighv3-3A0A0A6YWL2 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ighv3-3A0A0A6YWL2 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ighv3-3A0A0A6YWL2 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ighv3-3A0A0A6YWL2 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC12.96□□□□□ -0.34
Ighv3-3A0A0A6YWL2 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Ighv3-3A0A0A6YWL2 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ighv3-3A0A0A6YWL2 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ighv3-3A0A0A6YWL2 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ighv3-3A0A0A6YWL2 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Ighv3-3A0A0A6YWL2 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Ighv3-3A0A0A6YWL2 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ighv3-3A0A0A6YWL2 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ighv3-3A0A0A6YWL2 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ighv3-3A0A0A6YWL2 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ighv3-3A0A0A6YWL2 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Ighv3-3A0A0A6YWL2 Gm43294-201ENSMUST00000202850 2490 ntBASIC12.95□□□□□ -0.34
Ighv3-3A0A0A6YWL2 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms