Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC14.52□□□□□ -0.09
Trav18A0A075B656 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC14.52□□□□□ -0.09
Trav18A0A075B656 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav18A0A075B656 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trav18A0A075B656 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav18A0A075B656 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav18A0A075B656 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trav18A0A075B656 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav18A0A075B656 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC14.52□□□□□ -0.09
Trav18A0A075B656 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav18A0A075B656 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav18A0A075B656 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC14.51□□□□□ -0.09
Trav18A0A075B656 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav18A0A075B656 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav18A0A075B656 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav18A0A075B656 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav18A0A075B656 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC14.51□□□□□ -0.09
Trav18A0A075B656 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav18A0A075B656 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC14.51□□□□□ -0.09
Trav18A0A075B656 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav18A0A075B656 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav18A0A075B656 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Trav18A0A075B656 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC14.51□□□□□ -0.09
Trav18A0A075B656 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Trav18A0A075B656 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav18A0A075B656 Gm5898-201ENSMUST00000121016 2071 ntBASIC14.51□□□□□ -0.09
Trav18A0A075B656 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav18A0A075B656 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav18A0A075B656 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav18A0A075B656 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav18A0A075B656 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav18A0A075B656 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC14.5□□□□□ -0.09
Trav18A0A075B656 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav18A0A075B656 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav18A0A075B656 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav18A0A075B656 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav18A0A075B656 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Trav18A0A075B656 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav18A0A075B656 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC14.5□□□□□ -0.09
Trav18A0A075B656 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav18A0A075B656 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav18A0A075B656 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC14.5□□□□□ -0.09
Trav18A0A075B656 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav18A0A075B656 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav18A0A075B656 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav18A0A075B656 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav18A0A075B656 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav18A0A075B656 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav18A0A075B656 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav18A0A075B656 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav18A0A075B656 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav18A0A075B656 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav18A0A075B656 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav18A0A075B656 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Trav18A0A075B656 AC121598.2-201ENSMUST00000228376 2325 ntBASIC14.49□□□□□ -0.09
Trav18A0A075B656 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav18A0A075B656 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav18A0A075B656 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav18A0A075B656 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav18A0A075B656 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav18A0A075B656 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav18A0A075B656 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav18A0A075B656 Gm15635-204ENSMUST00000208024 2539 ntBASIC14.49□□□□□ -0.09
Trav18A0A075B656 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC14.49□□□□□ -0.09
Trav18A0A075B656 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav18A0A075B656 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav18A0A075B656 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC14.49□□□□□ -0.09
Trav18A0A075B656 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav18A0A075B656 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
Trav18A0A075B656 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav18A0A075B656 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC14.49□□□□□ -0.09
Trav18A0A075B656 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC14.49□□□□□ -0.09
Trav18A0A075B656 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC14.49□□□□□ -0.09
Trav18A0A075B656 Gm6365-201ENSMUST00000054711 744 ntBASIC14.49□□□□□ -0.09
Trav18A0A075B656 Gm37563-201ENSMUST00000192580 1513 ntBASIC14.49□□□□□ -0.09
Trav18A0A075B656 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav18A0A075B656 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav18A0A075B656 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav18A0A075B656 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav18A0A075B656 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC14.49□□□□□ -0.09
Trav18A0A075B656 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav18A0A075B656 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav18A0A075B656 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC14.48□□□□□ -0.09
Trav18A0A075B656 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav18A0A075B656 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav18A0A075B656 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav18A0A075B656 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Trav18A0A075B656 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Trav18A0A075B656 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Trav18A0A075B656 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav18A0A075B656 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Trav18A0A075B656 AC140264.2-202ENSMUST00000218746 817 ntBASIC14.48□□□□□ -0.09
Trav18A0A075B656 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav18A0A075B656 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav18A0A075B656 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Trav18A0A075B656 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav18A0A075B656 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav18A0A075B656 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Trav18A0A075B656 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav18A0A075B656 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms