Protein–RNA interactions for Protein: A0A075B648

Trav12-3, T cell receptor alpha variable 12-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3A0A075B648 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav12-3A0A075B648 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav12-3A0A075B648 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav12-3A0A075B648 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav12-3A0A075B648 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav12-3A0A075B648 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC12.94□□□□□ -0.34
Trav12-3A0A075B648 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav12-3A0A075B648 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav12-3A0A075B648 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav12-3A0A075B648 Gm43598-201ENSMUST00000202482 2479 ntBASIC12.94□□□□□ -0.34
Trav12-3A0A075B648 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav12-3A0A075B648 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav12-3A0A075B648 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav12-3A0A075B648 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav12-3A0A075B648 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav12-3A0A075B648 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC12.94□□□□□ -0.34
Trav12-3A0A075B648 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav12-3A0A075B648 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav12-3A0A075B648 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Trav12-3A0A075B648 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Trav12-3A0A075B648 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC12.94□□□□□ -0.34
Trav12-3A0A075B648 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav12-3A0A075B648 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav12-3A0A075B648 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC12.94□□□□□ -0.34
Trav12-3A0A075B648 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Trav12-3A0A075B648 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav12-3A0A075B648 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav12-3A0A075B648 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav12-3A0A075B648 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC12.94□□□□□ -0.34
Trav12-3A0A075B648 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC12.94□□□□□ -0.34
Trav12-3A0A075B648 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav12-3A0A075B648 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav12-3A0A075B648 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav12-3A0A075B648 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC12.93□□□□□ -0.34
Trav12-3A0A075B648 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trav12-3A0A075B648 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav12-3A0A075B648 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Trav12-3A0A075B648 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav12-3A0A075B648 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav12-3A0A075B648 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav12-3A0A075B648 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC12.93□□□□□ -0.34
Trav12-3A0A075B648 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav12-3A0A075B648 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav12-3A0A075B648 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav12-3A0A075B648 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav12-3A0A075B648 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav12-3A0A075B648 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav12-3A0A075B648 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav12-3A0A075B648 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC12.93□□□□□ -0.34
Trav12-3A0A075B648 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Trav12-3A0A075B648 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav12-3A0A075B648 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Trav12-3A0A075B648 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Trav12-3A0A075B648 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav12-3A0A075B648 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav12-3A0A075B648 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav12-3A0A075B648 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav12-3A0A075B648 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav12-3A0A075B648 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav12-3A0A075B648 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav12-3A0A075B648 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav12-3A0A075B648 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav12-3A0A075B648 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav12-3A0A075B648 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav12-3A0A075B648 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav12-3A0A075B648 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav12-3A0A075B648 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav12-3A0A075B648 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav12-3A0A075B648 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
Trav12-3A0A075B648 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav12-3A0A075B648 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav12-3A0A075B648 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Trav12-3A0A075B648 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC12.92□□□□□ -0.34
Trav12-3A0A075B648 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav12-3A0A075B648 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav12-3A0A075B648 Gm27502-201ENSMUST00000183495 199 ntBASIC12.92□□□□□ -0.34
Trav12-3A0A075B648 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav12-3A0A075B648 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav12-3A0A075B648 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav12-3A0A075B648 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Trav12-3A0A075B648 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav12-3A0A075B648 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav12-3A0A075B648 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Trav12-3A0A075B648 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
Trav12-3A0A075B648 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav12-3A0A075B648 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav12-3A0A075B648 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav12-3A0A075B648 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav12-3A0A075B648 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav12-3A0A075B648 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav12-3A0A075B648 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav12-3A0A075B648 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav12-3A0A075B648 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav12-3A0A075B648 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav12-3A0A075B648 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC12.91□□□□□ -0.34
Trav12-3A0A075B648 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav12-3A0A075B648 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav12-3A0A075B648 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav12-3A0A075B648 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav12-3A0A075B648 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms