Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav5-1A0A075B5Z7 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Trav5-1A0A075B5Z7 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav5-1A0A075B5Z7 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav5-1A0A075B5Z7 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav5-1A0A075B5Z7 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav5-1A0A075B5Z7 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav5-1A0A075B5Z7 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav5-1A0A075B5Z7 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Trav5-1A0A075B5Z7 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Trav5-1A0A075B5Z7 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav5-1A0A075B5Z7 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav5-1A0A075B5Z7 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav5-1A0A075B5Z7 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav5-1A0A075B5Z7 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC15.22■□□□□ 0.03
Trav5-1A0A075B5Z7 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav5-1A0A075B5Z7 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav5-1A0A075B5Z7 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav5-1A0A075B5Z7 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
Trav5-1A0A075B5Z7 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC15.22■□□□□ 0.03
Trav5-1A0A075B5Z7 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Trav5-1A0A075B5Z7 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav5-1A0A075B5Z7 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC15.22■□□□□ 0.03
Trav5-1A0A075B5Z7 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav5-1A0A075B5Z7 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav5-1A0A075B5Z7 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav5-1A0A075B5Z7 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Trav5-1A0A075B5Z7 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav5-1A0A075B5Z7 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC15.22■□□□□ 0.03
Trav5-1A0A075B5Z7 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav5-1A0A075B5Z7 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav5-1A0A075B5Z7 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav5-1A0A075B5Z7 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Trav5-1A0A075B5Z7 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC15.21■□□□□ 0.03
Trav5-1A0A075B5Z7 Gm10517-202ENSMUST00000192970 758 ntBASIC15.21■□□□□ 0.03
Trav5-1A0A075B5Z7 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav5-1A0A075B5Z7 Gm4974-201ENSMUST00000209974 875 ntBASIC15.21■□□□□ 0.03
Trav5-1A0A075B5Z7 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav5-1A0A075B5Z7 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav5-1A0A075B5Z7 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav5-1A0A075B5Z7 AC123834.2-201ENSMUST00000224038 2340 ntBASIC15.21■□□□□ 0.02
Trav5-1A0A075B5Z7 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav5-1A0A075B5Z7 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav5-1A0A075B5Z7 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav5-1A0A075B5Z7 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav5-1A0A075B5Z7 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Trav5-1A0A075B5Z7 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav5-1A0A075B5Z7 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav5-1A0A075B5Z7 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav5-1A0A075B5Z7 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Trav5-1A0A075B5Z7 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav5-1A0A075B5Z7 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav5-1A0A075B5Z7 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav5-1A0A075B5Z7 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Trav5-1A0A075B5Z7 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav5-1A0A075B5Z7 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav5-1A0A075B5Z7 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav5-1A0A075B5Z7 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav5-1A0A075B5Z7 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav5-1A0A075B5Z7 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Trav5-1A0A075B5Z7 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav5-1A0A075B5Z7 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Trav5-1A0A075B5Z7 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC15.2■□□□□ 0.02
Trav5-1A0A075B5Z7 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav5-1A0A075B5Z7 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC15.2■□□□□ 0.02
Trav5-1A0A075B5Z7 AL672049.1-201ENSMUST00000197943 91 ntBASIC15.2■□□□□ 0.02
Trav5-1A0A075B5Z7 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC15.2■□□□□ 0.02
Trav5-1A0A075B5Z7 Gm21814-202ENSMUST00000203277 873 ntBASIC15.2■□□□□ 0.02
Trav5-1A0A075B5Z7 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC15.2■□□□□ 0.02
Trav5-1A0A075B5Z7 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC15.2■□□□□ 0.02
Trav5-1A0A075B5Z7 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav5-1A0A075B5Z7 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav5-1A0A075B5Z7 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav5-1A0A075B5Z7 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav5-1A0A075B5Z7 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav5-1A0A075B5Z7 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav5-1A0A075B5Z7 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC15.2■□□□□ 0.02
Trav5-1A0A075B5Z7 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav5-1A0A075B5Z7 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav5-1A0A075B5Z7 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav5-1A0A075B5Z7 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav5-1A0A075B5Z7 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav5-1A0A075B5Z7 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav5-1A0A075B5Z7 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav5-1A0A075B5Z7 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Trav5-1A0A075B5Z7 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
Trav5-1A0A075B5Z7 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Trav5-1A0A075B5Z7 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav5-1A0A075B5Z7 Gm9694-201ENSMUST00000193347 1189 ntBASIC15.19■□□□□ 0.02
Trav5-1A0A075B5Z7 Arhgef4-208ENSMUST00000211073 171 ntBASIC15.19■□□□□ 0.02
Trav5-1A0A075B5Z7 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC15.19■□□□□ 0.02
Trav5-1A0A075B5Z7 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav5-1A0A075B5Z7 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav5-1A0A075B5Z7 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav5-1A0A075B5Z7 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav5-1A0A075B5Z7 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav5-1A0A075B5Z7 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav5-1A0A075B5Z7 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav5-1A0A075B5Z7 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav5-1A0A075B5Z7 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms