Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm28835-203ENSMUST00000190062 615 ntBASIC4.87□□□□□ -1.63
Trim3Q9R1R2 Gm18183-201ENSMUST00000191024 615 ntBASIC4.87□□□□□ -1.63
Trim3Q9R1R2 Gm37436-201ENSMUST00000193842 1085 ntBASIC4.87□□□□□ -1.63
Trim3Q9R1R2 Gm37720-201ENSMUST00000195497 1241 ntBASIC4.87□□□□□ -1.63
Trim3Q9R1R2 Gm33952-201ENSMUST00000197795 408 ntBASIC4.87□□□□□ -1.63
Trim3Q9R1R2 Mir409-201ENSMUST00000198153 79 ntBASIC4.87□□□□□ -1.63
Trim3Q9R1R2 8030487O14Rik-201ENSMUST00000200244 903 ntBASIC4.87□□□□□ -1.63
Trim3Q9R1R2 Gm44991-201ENSMUST00000208669 479 ntTSL 3 BASIC4.87□□□□□ -1.63
Trim3Q9R1R2 AC161256.1-201ENSMUST00000217312 213 ntBASIC4.87□□□□□ -1.63
Trim3Q9R1R2 AC142227.2-201ENSMUST00000220675 400 ntTSL 5 BASIC4.87□□□□□ -1.63
Trim3Q9R1R2 Gm34081-201ENSMUST00000221332 690 ntTSL 5 BASIC4.87□□□□□ -1.63
Trim3Q9R1R2 Rnase12-202ENSMUST00000227764 673 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Trim3Q9R1R2 2310061N02Rik-201ENSMUST00000050882 794 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Trim3Q9R1R2 Gm23459-201ENSMUST00000083259 131 ntBASIC4.87□□□□□ -1.63
Trim3Q9R1R2 Rnase12-201ENSMUST00000089798 545 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Trim3Q9R1R2 Olfr1133-201ENSMUST00000099855 942 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Trim3Q9R1R2 Gm6634-201ENSMUST00000180497 1804 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Trim3Q9R1R2 Gm37357-201ENSMUST00000192386 3123 ntBASIC4.87□□□□□ -1.63
Trim3Q9R1R2 Olfr391-ps-201ENSMUST00000214485 2080 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
Trim3Q9R1R2 Iqch-203ENSMUST00000163624 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Trim3Q9R1R2 Nr1h5-201ENSMUST00000058899 2835 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
Trim3Q9R1R2 Olfr424-202ENSMUST00000214751 1642 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Trim3Q9R1R2 Vmn1r204-202ENSMUST00000228195 2936 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Trim3Q9R1R2 Rnf213-202ENSMUST00000131035 16716 ntAPPRIS P5 TSL 5 BASIC4.86□□□□□ -1.63
Trim3Q9R1R2 Lpp-202ENSMUST00000078988 15440 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Trim3Q9R1R2 Gm43283-201ENSMUST00000199138 2548 ntBASIC4.86□□□□□ -1.63
Trim3Q9R1R2 Vmn2r117-201ENSMUST00000171996 2574 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Trim3Q9R1R2 Prrc2c-210ENSMUST00000182660 11502 ntAPPRIS P2 TSL 5 BASIC4.86□□□□□ -1.63
Trim3Q9R1R2 Huwe1-202ENSMUST00000112622 14168 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
Trim3Q9R1R2 Abcb11-201ENSMUST00000102709 5025 ntAPPRIS P2 TSL 5 BASIC4.86□□□□□ -1.63
Trim3Q9R1R2 Ttc39d-201ENSMUST00000053168 2022 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Trim3Q9R1R2 Gm6754-201ENSMUST00000117124 913 ntBASIC4.86□□□□□ -1.63
Trim3Q9R1R2 Gm11984-201ENSMUST00000118142 766 ntBASIC4.86□□□□□ -1.63
Trim3Q9R1R2 Gm14985-201ENSMUST00000118693 786 ntBASIC4.86□□□□□ -1.63
Trim3Q9R1R2 Olfr637-ps1-201ENSMUST00000120386 471 ntBASIC4.86□□□□□ -1.63
Trim3Q9R1R2 Gm11805-201ENSMUST00000121238 600 ntBASIC4.86□□□□□ -1.63
Trim3Q9R1R2 2010013B24Rik-201ENSMUST00000126922 747 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Trim3Q9R1R2 Gm12514-202ENSMUST00000150455 699 ntTSL 5 BASIC4.86□□□□□ -1.63
Trim3Q9R1R2 Gm24402-201ENSMUST00000157873 91 ntBASIC4.86□□□□□ -1.63
Trim3Q9R1R2 Gas5-209ENSMUST00000159663 346 ntTSL 3 BASIC4.86□□□□□ -1.63
Trim3Q9R1R2 Gm15810-201ENSMUST00000160241 681 ntTSL 3 BASIC4.86□□□□□ -1.63
Trim3Q9R1R2 Gm16566-201ENSMUST00000160387 910 ntBASIC4.86□□□□□ -1.63
Trim3Q9R1R2 Gm17160-201ENSMUST00000170645 260 ntTSL 3 BASIC4.86□□□□□ -1.63
Trim3Q9R1R2 Vmn1r-ps66-201ENSMUST00000173436 612 ntBASIC4.86□□□□□ -1.63
Trim3Q9R1R2 Gm22923-201ENSMUST00000174952 110 ntBASIC4.86□□□□□ -1.63
Trim3Q9R1R2 Gm3307-201ENSMUST00000176164 632 ntBASIC4.86□□□□□ -1.63
Trim3Q9R1R2 Gm22254-201ENSMUST00000179186 110 ntBASIC4.86□□□□□ -1.63
Trim3Q9R1R2 Gm29454-201ENSMUST00000190805 393 ntBASIC4.86□□□□□ -1.63
Trim3Q9R1R2 Gm18717-201ENSMUST00000192744 1241 ntBASIC4.86□□□□□ -1.63
Trim3Q9R1R2 Gm37490-201ENSMUST00000195566 724 ntBASIC4.86□□□□□ -1.63
Trim3Q9R1R2 Igkv3-8-201ENSMUST00000197635 339 ntBASIC4.86□□□□□ -1.63
Trim3Q9R1R2 Igkv12-66-201ENSMUST00000199305 348 ntBASIC4.86□□□□□ -1.63
Trim3Q9R1R2 Gm6261-201ENSMUST00000204707 760 ntBASIC4.86□□□□□ -1.63
Trim3Q9R1R2 Gm44674-201ENSMUST00000206159 415 ntTSL 3 BASIC4.86□□□□□ -1.63
Trim3Q9R1R2 AC138284.5-201ENSMUST00000214389 652 ntBASIC4.86□□□□□ -1.63
Trim3Q9R1R2 AC123944.2-201ENSMUST00000215290 382 ntBASIC4.86□□□□□ -1.63
Trim3Q9R1R2 3110043J17Rik-201ENSMUST00000219153 760 ntBASIC4.86□□□□□ -1.63
Trim3Q9R1R2 AC158536.1-201ENSMUST00000222510 256 ntBASIC4.86□□□□□ -1.63
Trim3Q9R1R2 CT030182.2-201ENSMUST00000223569 620 ntBASIC4.86□□□□□ -1.63
Trim3Q9R1R2 AC154838.2-201ENSMUST00000226602 747 ntBASIC4.86□□□□□ -1.63
Trim3Q9R1R2 Vmn1r16-201ENSMUST00000227168 912 ntAPPRIS P2 BASIC4.86□□□□□ -1.63
Trim3Q9R1R2 AC154239.1-201ENSMUST00000228565 406 ntBASIC4.86□□□□□ -1.63
Trim3Q9R1R2 AC154846.2-201ENSMUST00000228805 424 ntBASIC4.86□□□□□ -1.63
Trim3Q9R1R2 C130073F10Rik-201ENSMUST00000051043 913 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Trim3Q9R1R2 Amelx-201ENSMUST00000066112 802 ntAPPRIS P4 TSL 1 (best) BASIC4.86□□□□□ -1.63
Trim3Q9R1R2 Ctsj-201ENSMUST00000071526 1271 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
Trim3Q9R1R2 Olfr664-201ENSMUST00000072887 966 ntAPPRIS P5 BASIC4.86□□□□□ -1.63
Trim3Q9R1R2 Mrgprb3-201ENSMUST00000094383 1009 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Trim3Q9R1R2 Gm5941-201ENSMUST00000096371 560 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Trim3Q9R1R2 D7Ertd443e-202ENSMUST00000106129 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
Trim3Q9R1R2 Rprd2-202ENSMUST00000197449 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
Trim3Q9R1R2 Olfr535-207ENSMUST00000217235 5186 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Trim3Q9R1R2 Olfr403-202ENSMUST00000206114 3444 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
Trim3Q9R1R2 AC154227.1-201ENSMUST00000228809 2467 ntBASIC4.86□□□□□ -1.63
Trim3Q9R1R2 Gm44248-201ENSMUST00000203079 1549 ntBASIC4.86□□□□□ -1.63
Trim3Q9R1R2 Zfand6-201ENSMUST00000069537 1658 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Trim3Q9R1R2 Gm11743-201ENSMUST00000117385 1735 ntBASIC4.86□□□□□ -1.63
Trim3Q9R1R2 Prune2-201ENSMUST00000087689 12512 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Trim3Q9R1R2 Gm5662-201ENSMUST00000101168 1840 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Trim3Q9R1R2 Zfp433-201ENSMUST00000085664 1800 ntTSL 5 BASIC4.86□□□□□ -1.63
Trim3Q9R1R2 Gm15262-202ENSMUST00000207320 5010 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Trim3Q9R1R2 Gm42440-201ENSMUST00000197906 2284 ntBASIC4.85□□□□□ -1.63
Trim3Q9R1R2 Lrp1b-208ENSMUST00000167270 10071 ntTSL 5 BASIC4.85□□□□□ -1.63
Trim3Q9R1R2 Gm8674-201ENSMUST00000179367 3047 ntBASIC4.85□□□□□ -1.63
Trim3Q9R1R2 Zfp738-203ENSMUST00000137496 13215 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Trim3Q9R1R2 Tlr6-201ENSMUST00000062315 3677 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Trim3Q9R1R2 Gm22273-201ENSMUST00000104040 132 ntBASIC4.85□□□□□ -1.63
Trim3Q9R1R2 Olfr1146-ps1-201ENSMUST00000117180 943 ntBASIC4.85□□□□□ -1.63
Trim3Q9R1R2 Gm10241-201ENSMUST00000117664 286 ntBASIC4.85□□□□□ -1.63
Trim3Q9R1R2 Gm13787-201ENSMUST00000120422 168 ntBASIC4.85□□□□□ -1.63
Trim3Q9R1R2 Gtsf1-205ENSMUST00000141364 700 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Trim3Q9R1R2 Gm12602-202ENSMUST00000154352 707 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Trim3Q9R1R2 Gm22730-201ENSMUST00000158085 171 ntBASIC4.85□□□□□ -1.63
Trim3Q9R1R2 Gm8256-201ENSMUST00000169178 453 ntBASIC4.85□□□□□ -1.63
Trim3Q9R1R2 Rps11-ps1-201ENSMUST00000171632 475 ntBASIC4.85□□□□□ -1.63
Trim3Q9R1R2 Lgals1-ps1-201ENSMUST00000173500 368 ntBASIC4.85□□□□□ -1.63
Trim3Q9R1R2 Gm10784-201ENSMUST00000178715 238 ntBASIC4.85□□□□□ -1.63
Trim3Q9R1R2 Vmn1r227-202ENSMUST00000179914 1026 ntBASIC4.85□□□□□ -1.63
Trim3Q9R1R2 Serpinb10-202ENSMUST00000182198 1265 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Trim3Q9R1R2 Gm19029-201ENSMUST00000189923 564 ntBASIC4.85□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms