Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Clca4c-ps-202ENSMUST00000200595 2779 ntBASIC4.78□□□□□ -1.64
Cdc40Q9DC48 Olfr1449-203ENSMUST00000214079 1304 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Cdc40Q9DC48 Gm10441-201ENSMUST00000200950 1546 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Cdc40Q9DC48 9630002D21Rik-202ENSMUST00000222033 2345 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Cdc40Q9DC48 Gm3055-201ENSMUST00000105316 720 ntTSL 5 BASIC4.78□□□□□ -1.64
Cdc40Q9DC48 Gm12287-201ENSMUST00000119770 707 ntBASIC4.78□□□□□ -1.64
Cdc40Q9DC48 Gm13435-201ENSMUST00000120111 1023 ntBASIC4.78□□□□□ -1.64
Cdc40Q9DC48 Gm16179-201ENSMUST00000120685 373 ntBASIC4.78□□□□□ -1.64
Cdc40Q9DC48 3110004A20Rik-201ENSMUST00000123904 385 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Cdc40Q9DC48 Fpr2-202ENSMUST00000149944 883 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Cdc40Q9DC48 Gm25389-201ENSMUST00000157340 286 ntBASIC4.78□□□□□ -1.64
Cdc40Q9DC48 Dnaja1-ps-201ENSMUST00000162103 642 ntBASIC4.78□□□□□ -1.64
Cdc40Q9DC48 Obox4-ps14-201ENSMUST00000177198 1127 ntBASIC4.78□□□□□ -1.64
Cdc40Q9DC48 Pinc-202ENSMUST00000190487 961 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Cdc40Q9DC48 Gm36994-201ENSMUST00000192941 492 ntBASIC4.78□□□□□ -1.64
Cdc40Q9DC48 4930447N08Rik-201ENSMUST00000196290 497 ntTSL 3 BASIC4.78□□□□□ -1.64
Cdc40Q9DC48 Gm9173-201ENSMUST00000198054 400 ntBASIC4.78□□□□□ -1.64
Cdc40Q9DC48 Gm43262-201ENSMUST00000202970 1219 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Cdc40Q9DC48 Gm44646-201ENSMUST00000205847 421 ntTSL 2 BASIC4.78□□□□□ -1.64
Cdc40Q9DC48 Olfr663-201ENSMUST00000209914 959 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Cdc40Q9DC48 AC124356.2-201ENSMUST00000221874 336 ntBASIC4.78□□□□□ -1.64
Cdc40Q9DC48 BC049715-201ENSMUST00000052702 1120 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Cdc40Q9DC48 Olfr1341-201ENSMUST00000061215 939 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Cdc40Q9DC48 Gm10061-201ENSMUST00000073111 465 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Cdc40Q9DC48 Rpl26-201ENSMUST00000073471 526 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Cdc40Q9DC48 Zfp781-201ENSMUST00000076281 732 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Cdc40Q9DC48 Hmcn1-201ENSMUST00000074783 17908 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Cdc40Q9DC48 Gm3696-201ENSMUST00000167923 1814 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Cdc40Q9DC48 Gm36931-201ENSMUST00000192997 4801 ntBASIC4.78□□□□□ -1.64
Cdc40Q9DC48 Tmem67-201ENSMUST00000050686 3456 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Cdc40Q9DC48 Gm18186-201ENSMUST00000192239 1580 ntBASIC4.78□□□□□ -1.64
Cdc40Q9DC48 Gm38067-201ENSMUST00000192346 1911 ntBASIC4.78□□□□□ -1.64
Cdc40Q9DC48 Gm37776-201ENSMUST00000193471 2497 ntBASIC4.78□□□□□ -1.64
Cdc40Q9DC48 Glb1l3-201ENSMUST00000034448 2468 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
Cdc40Q9DC48 Clec9a-201ENSMUST00000058352 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
Cdc40Q9DC48 1700017N19Rik-201ENSMUST00000041162 1691 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Cdc40Q9DC48 Cpne4-202ENSMUST00000077190 3409 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Cdc40Q9DC48 Piga-201ENSMUST00000033754 3594 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Cdc40Q9DC48 Olfr716-206ENSMUST00000215284 3515 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Cdc40Q9DC48 Ighv9-4-201ENSMUST00000103482 294 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Cdc40Q9DC48 Traj7-201ENSMUST00000103733 59 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Cdc40Q9DC48 Cask-202ENSMUST00000115435 726 ntTSL 3 BASIC4.77□□□□□ -1.65
Cdc40Q9DC48 Dnajc19-ps-201ENSMUST00000120890 351 ntBASIC4.77□□□□□ -1.65
Cdc40Q9DC48 Gm14957-201ENSMUST00000121069 817 ntBASIC4.77□□□□□ -1.65
Cdc40Q9DC48 Gm5383-201ENSMUST00000121177 617 ntBASIC4.77□□□□□ -1.65
Cdc40Q9DC48 Gm3053-201ENSMUST00000161709 616 ntBASIC4.77□□□□□ -1.65
Cdc40Q9DC48 Gm10784-201ENSMUST00000178715 238 ntBASIC4.77□□□□□ -1.65
Cdc40Q9DC48 Snhg6-205ENSMUST00000182819 816 ntTSL 2 BASIC4.77□□□□□ -1.65
Cdc40Q9DC48 Gm27234-201ENSMUST00000183362 581 ntTSL 5 BASIC4.77□□□□□ -1.65
Cdc40Q9DC48 Gm27820-201ENSMUST00000183628 175 ntBASIC4.77□□□□□ -1.65
Cdc40Q9DC48 Gm31749-201ENSMUST00000206873 598 ntTSL 3 BASIC4.77□□□□□ -1.65
Cdc40Q9DC48 Gm45276-201ENSMUST00000209549 1086 ntBASIC4.77□□□□□ -1.65
Cdc40Q9DC48 Gm21041-201ENSMUST00000214829 823 ntBASIC4.77□□□□□ -1.65
Cdc40Q9DC48 AC165953.1-201ENSMUST00000226386 357 ntBASIC4.77□□□□□ -1.65
Cdc40Q9DC48 AC154627.3-201ENSMUST00000228441 334 ntBASIC4.77□□□□□ -1.65
Cdc40Q9DC48 Ccl11-201ENSMUST00000000342 1082 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Cdc40Q9DC48 Olfr1467-201ENSMUST00000054687 927 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Cdc40Q9DC48 Olfr749-201ENSMUST00000074674 1016 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
Cdc40Q9DC48 Gm10112-201ENSMUST00000075226 354 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Cdc40Q9DC48 Olfr1505-201ENSMUST00000081520 1103 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Cdc40Q9DC48 Snord15b-201ENSMUST00000083032 145 ntBASIC4.77□□□□□ -1.65
Cdc40Q9DC48 Gm25099-201ENSMUST00000093716 116 ntBASIC4.77□□□□□ -1.65
Cdc40Q9DC48 Olfr501-ps1-201ENSMUST00000094105 946 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Cdc40Q9DC48 Gm43921-201ENSMUST00000204296 1792 ntBASIC4.77□□□□□ -1.65
Cdc40Q9DC48 Olfr403-202ENSMUST00000206114 3444 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
Cdc40Q9DC48 Map3k19-201ENSMUST00000061512 3936 ntAPPRIS P2 TSL 5 BASIC4.77□□□□□ -1.65
Cdc40Q9DC48 Apob-202ENSMUST00000037811 13934 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Cdc40Q9DC48 Myo3a-201ENSMUST00000044749 5082 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Cdc40Q9DC48 Impg1-201ENSMUST00000085289 3356 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
Cdc40Q9DC48 Vmn1r175-202ENSMUST00000228383 2878 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Cdc40Q9DC48 A930017M01Rik-205ENSMUST00000227721 4167 ntBASIC4.77□□□□□ -1.65
Cdc40Q9DC48 Senp7-202ENSMUST00000089360 4802 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
Cdc40Q9DC48 Abcg3-201ENSMUST00000031239 3035 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Cdc40Q9DC48 Gm43000-201ENSMUST00000198482 3343 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Cdc40Q9DC48 Gm44027-201ENSMUST00000203419 3480 ntBASIC4.77□□□□□ -1.65
Cdc40Q9DC48 Gm5844-201ENSMUST00000119417 2191 ntBASIC4.77□□□□□ -1.65
Cdc40Q9DC48 4930509J09Rik-201ENSMUST00000194514 1526 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Cdc40Q9DC48 Cyp2j12-201ENSMUST00000097972 1675 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Cdc40Q9DC48 AC116797.2-201ENSMUST00000224763 4221 ntBASIC4.77□□□□□ -1.65
Cdc40Q9DC48 E330016L19Rik-201ENSMUST00000140614 1959 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Cdc40Q9DC48 Rmi1-204ENSMUST00000225815 2447 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Cdc40Q9DC48 Ogt-201ENSMUST00000044475 5384 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
Cdc40Q9DC48 Gm6645-201ENSMUST00000118505 2726 ntBASIC4.76□□□□□ -1.65
Cdc40Q9DC48 Serpina1f-203ENSMUST00000118101 1453 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Cdc40Q9DC48 A430027C01Rik-201ENSMUST00000194599 1644 ntBASIC4.76□□□□□ -1.65
Cdc40Q9DC48 Epha7-201ENSMUST00000029964 6746 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
Cdc40Q9DC48 Elmod1-202ENSMUST00000166580 2243 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
Cdc40Q9DC48 Gm37529-201ENSMUST00000195618 4321 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Cdc40Q9DC48 Gm24350-201ENSMUST00000104163 133 ntBASIC4.76□□□□□ -1.65
Cdc40Q9DC48 Gm24789-201ENSMUST00000104282 131 ntBASIC4.76□□□□□ -1.65
Cdc40Q9DC48 Gm21637-201ENSMUST00000105124 778 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Cdc40Q9DC48 Olfr260-ps1-201ENSMUST00000117279 822 ntBASIC4.76□□□□□ -1.65
Cdc40Q9DC48 Gm12683-201ENSMUST00000117528 415 ntBASIC4.76□□□□□ -1.65
Cdc40Q9DC48 Gm16089-201ENSMUST00000117679 336 ntBASIC4.76□□□□□ -1.65
Cdc40Q9DC48 Gm25176-201ENSMUST00000122640 125 ntBASIC4.76□□□□□ -1.65
Cdc40Q9DC48 Gm11967-201ENSMUST00000135132 480 ntTSL 2 BASIC4.76□□□□□ -1.65
Cdc40Q9DC48 Gm23229-201ENSMUST00000157297 105 ntBASIC4.76□□□□□ -1.65
Cdc40Q9DC48 Samd3-202ENSMUST00000164660 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
Cdc40Q9DC48 Rps27-201ENSMUST00000170122 345 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Cdc40Q9DC48 Vmn1r57-201ENSMUST00000170780 933 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 79.9 ms