Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Gm4487-201ENSMUST00000150617 442 ntBASIC4.81□□□□□ -1.64
Cdh23Q99PF4 Spin2g-201ENSMUST00000178425 687 ntBASIC4.81□□□□□ -1.64
Cdh23Q99PF4 Gm27165-201ENSMUST00000183951 232 ntBASIC4.81□□□□□ -1.64
Cdh23Q99PF4 Gm42566-201ENSMUST00000197120 643 ntBASIC4.81□□□□□ -1.64
Cdh23Q99PF4 Gm43814-201ENSMUST00000197851 413 ntBASIC4.81□□□□□ -1.64
Cdh23Q99PF4 Gm45870-201ENSMUST00000211269 601 ntBASIC4.81□□□□□ -1.64
Cdh23Q99PF4 AC137127.3-201ENSMUST00000213340 349 ntBASIC4.81□□□□□ -1.64
Cdh23Q99PF4 AC164087.1-201ENSMUST00000215174 733 ntTSL 3 BASIC4.81□□□□□ -1.64
Cdh23Q99PF4 AC158686.2-201ENSMUST00000218599 976 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Cdh23Q99PF4 AC134577.1-201ENSMUST00000227572 295 ntBASIC4.81□□□□□ -1.64
Cdh23Q99PF4 Mir338-201ENSMUST00000083666 98 ntBASIC4.81□□□□□ -1.64
Cdh23Q99PF4 Defb26-201ENSMUST00000099205 561 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Cdh23Q99PF4 Ktn1-221ENSMUST00000190535 4112 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
Cdh23Q99PF4 Gm37530-201ENSMUST00000191759 4932 ntBASIC4.81□□□□□ -1.64
Cdh23Q99PF4 Mtx3-201ENSMUST00000076169 6275 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Cdh23Q99PF4 C2cd3-201ENSMUST00000051777 7803 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
Cdh23Q99PF4 Oprk1-204ENSMUST00000160777 4675 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Cdh23Q99PF4 Serpinb6c-202ENSMUST00000172184 1327 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Cdh23Q99PF4 Nlrp1a-201ENSMUST00000048514 3903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Cdh23Q99PF4 Gm44027-201ENSMUST00000203419 3480 ntBASIC4.81□□□□□ -1.64
Cdh23Q99PF4 4930402H24Rik-203ENSMUST00000119422 3815 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Cdh23Q99PF4 Gm25999-201ENSMUST00000175398 133 ntBASIC4.81□□□□□ -1.64
Cdh23Q99PF4 Gm27695-201ENSMUST00000184301 91 ntBASIC4.81□□□□□ -1.64
Cdh23Q99PF4 Gm2522-201ENSMUST00000204280 322 ntBASIC4.81□□□□□ -1.64
Cdh23Q99PF4 Gm17780-201ENSMUST00000207142 612 ntBASIC4.81□□□□□ -1.64
Cdh23Q99PF4 Gm19921-201ENSMUST00000210505 703 ntBASIC4.81□□□□□ -1.64
Cdh23Q99PF4 Gm9309-201ENSMUST00000223537 546 ntBASIC4.81□□□□□ -1.64
Cdh23Q99PF4 9530036M11Rik-201ENSMUST00000138767 1996 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Cdh23Q99PF4 Tns1-208ENSMUST00000187584 9916 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
Cdh23Q99PF4 Dcp2-201ENSMUST00000025350 8616 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Cdh23Q99PF4 Slc12a6-201ENSMUST00000028549 6105 ntAPPRIS P4 TSL 1 (best) BASIC4.8□□□□□ -1.64
Cdh23Q99PF4 Olfr1197-202ENSMUST00000213118 2899 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Cdh23Q99PF4 Zfp607b-202ENSMUST00000120004 4612 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Cdh23Q99PF4 Mroh2a-202ENSMUST00000113130 7491 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
Cdh23Q99PF4 Slc22a30-202ENSMUST00000096269 2255 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Cdh23Q99PF4 AC122769.3-201ENSMUST00000227739 3245 ntBASIC4.8□□□□□ -1.64
Cdh23Q99PF4 Slc31a1-202ENSMUST00000122092 4154 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Cdh23Q99PF4 Gm11598-201ENSMUST00000119257 357 ntBASIC4.8□□□□□ -1.64
Cdh23Q99PF4 Gm12735-201ENSMUST00000146218 651 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Cdh23Q99PF4 Gm25907-201ENSMUST00000158486 125 ntBASIC4.8□□□□□ -1.64
Cdh23Q99PF4 Gm27940-201ENSMUST00000184449 98 ntBASIC4.8□□□□□ -1.64
Cdh23Q99PF4 Ly6a-203ENSMUST00000187171 853 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Cdh23Q99PF4 Ly6a-204ENSMUST00000187994 955 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Cdh23Q99PF4 Gm7946-201ENSMUST00000203326 958 ntBASIC4.8□□□□□ -1.64
Cdh23Q99PF4 AC122448.1-201ENSMUST00000226317 772 ntBASIC4.8□□□□□ -1.64
Cdh23Q99PF4 Ly6a-201ENSMUST00000023248 819 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Cdh23Q99PF4 Pls3-202ENSMUST00000114057 3160 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Cdh23Q99PF4 Gm33680-202ENSMUST00000219411 3401 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Cdh23Q99PF4 Rapgef5-201ENSMUST00000109691 6746 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Cdh23Q99PF4 Gm37079-201ENSMUST00000194114 2135 ntBASIC4.8□□□□□ -1.64
Cdh23Q99PF4 Muc6-203ENSMUST00000190907 8757 ntAPPRIS P5 TSL 5 BASIC4.8□□□□□ -1.64
Cdh23Q99PF4 Aff1-201ENSMUST00000031256 8312 ntAPPRIS P4 TSL 5 BASIC4.8□□□□□ -1.64
Cdh23Q99PF4 Fap-208ENSMUST00000174234 2211 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
Cdh23Q99PF4 Ctnnd1-208ENSMUST00000111677 5789 ntTSL 5 BASIC4.8□□□□□ -1.64
Cdh23Q99PF4 Gm42717-201ENSMUST00000197309 3463 ntBASIC4.8□□□□□ -1.64
Cdh23Q99PF4 Mlip-205ENSMUST00000183955 3069 ntAPPRIS P5 TSL 5 BASIC4.8□□□□□ -1.64
Cdh23Q99PF4 Gm12252-201ENSMUST00000119517 219 ntBASIC4.8□□□□□ -1.64
Cdh23Q99PF4 Rpl31-ps24-201ENSMUST00000181350 379 ntBASIC4.8□□□□□ -1.64
Cdh23Q99PF4 Gm4036-201ENSMUST00000220842 626 ntBASIC4.8□□□□□ -1.64
Cdh23Q99PF4 Gm10145-201ENSMUST00000077776 462 ntBASIC4.8□□□□□ -1.64
Cdh23Q99PF4 Akap4-202ENSMUST00000115750 3021 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
Cdh23Q99PF4 Dlg2-201ENSMUST00000074273 5278 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
Cdh23Q99PF4 Entpd5-201ENSMUST00000021662 4931 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Cdh23Q99PF4 Gm37749-201ENSMUST00000193917 1899 ntBASIC4.8□□□□□ -1.64
Cdh23Q99PF4 Gm7529-201ENSMUST00000213753 1897 ntBASIC4.8□□□□□ -1.64
Cdh23Q99PF4 Vmn2r102-201ENSMUST00000171741 2574 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Cdh23Q99PF4 Vmn1r20-202ENSMUST00000227909 3709 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Cdh23Q99PF4 Zfp955b-201ENSMUST00000099414 1638 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Cdh23Q99PF4 Zfp78-204ENSMUST00000207347 3883 ntAPPRIS P4 TSL 1 (best) BASIC4.8□□□□□ -1.64
Cdh23Q99PF4 Pde1c-206ENSMUST00000166890 4728 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Cdh23Q99PF4 Gm18259-201ENSMUST00000220991 2010 ntBASIC4.8□□□□□ -1.64
Cdh23Q99PF4 Vmn1r171-212ENSMUST00000228674 2488 ntAPPRIS ALT2 BASIC4.8□□□□□ -1.64
Cdh23Q99PF4 4930428E07Rik-202ENSMUST00000222922 3799 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Cdh23Q99PF4 Il7r-201ENSMUST00000003981 3540 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Cdh23Q99PF4 Vmn1r181-204ENSMUST00000227637 4587 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Cdh23Q99PF4 Gm23175-201ENSMUST00000104371 132 ntBASIC4.79□□□□□ -1.64
Cdh23Q99PF4 Gm11699-201ENSMUST00000119016 401 ntBASIC4.79□□□□□ -1.64
Cdh23Q99PF4 Vmn1r23-201ENSMUST00000175817 997 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Cdh23Q99PF4 C030018K13Rik-201ENSMUST00000196527 866 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Cdh23Q99PF4 Gm6828-201ENSMUST00000207902 1186 ntBASIC4.79□□□□□ -1.64
Cdh23Q99PF4 Tpt1-ps4-201ENSMUST00000210908 503 ntBASIC4.79□□□□□ -1.64
Cdh23Q99PF4 CT009504.2-201ENSMUST00000217951 2960 ntTSL 5 BASIC4.79□□□□□ -1.64
Cdh23Q99PF4 Gm3086-202ENSMUST00000221248 310 ntBASIC4.79□□□□□ -1.64
Cdh23Q99PF4 CT025686.1-201ENSMUST00000227592 438 ntBASIC4.79□□□□□ -1.64
Cdh23Q99PF4 Olfr629-201ENSMUST00000051346 1122 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Cdh23Q99PF4 Olfr782-201ENSMUST00000077024 945 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Cdh23Q99PF4 Olfr1416-202ENSMUST00000214928 4838 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
Cdh23Q99PF4 Mcmdc2-202ENSMUST00000118098 2072 ntTSL 5 BASIC4.79□□□□□ -1.64
Cdh23Q99PF4 Cept1-201ENSMUST00000039153 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Cdh23Q99PF4 Elavl2-208ENSMUST00000107120 4191 ntTSL 5 BASIC4.79□□□□□ -1.64
Cdh23Q99PF4 Acsm3-204ENSMUST00000106528 2755 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Cdh23Q99PF4 Gm42559-201ENSMUST00000201811 3532 ntBASIC4.79□□□□□ -1.64
Cdh23Q99PF4 Ptprc-207ENSMUST00000183301 5074 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
Cdh23Q99PF4 Vmn1r70-203ENSMUST00000226255 4868 ntAPPRIS P2 BASIC4.79□□□□□ -1.64
Cdh23Q99PF4 Vmn1r169-202ENSMUST00000226669 2326 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Cdh23Q99PF4 Vmn1r169-203ENSMUST00000227547 2322 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Cdh23Q99PF4 Olfr536-201ENSMUST00000064392 3853 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Cdh23Q99PF4 Golga3-201ENSMUST00000031477 4805 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
Cdh23Q99PF4 Yes1-202ENSMUST00000168707 2259 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Cdh23Q99PF4 BB365896-201ENSMUST00000173978 3000 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 92.9 ms