Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Gm37989-201ENSMUST00000195202 803 ntBASIC5.3□□□□□ -1.56
Msh4Q99MT2 Gm42652-201ENSMUST00000199073 614 ntBASIC5.3□□□□□ -1.56
Msh4Q99MT2 Tas2r145-ps3-201ENSMUST00000204526 992 ntBASIC5.3□□□□□ -1.56
Msh4Q99MT2 Gm45169-201ENSMUST00000205717 639 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Msh4Q99MT2 Gm18855-201ENSMUST00000206689 570 ntBASIC5.3□□□□□ -1.56
Msh4Q99MT2 1700095K22Rik-201ENSMUST00000206808 282 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Msh4Q99MT2 Gm44830-201ENSMUST00000207667 584 ntBASIC5.3□□□□□ -1.56
Msh4Q99MT2 Gm19168-201ENSMUST00000218804 1091 ntBASIC5.3□□□□□ -1.56
Msh4Q99MT2 Gm8137-201ENSMUST00000218997 463 ntBASIC5.3□□□□□ -1.56
Msh4Q99MT2 AC192616.2-201ENSMUST00000221482 3841 ntBASIC5.3□□□□□ -1.56
Msh4Q99MT2 Prl2c2-203ENSMUST00000221612 596 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Msh4Q99MT2 Gm10037-204ENSMUST00000222626 692 ntAPPRIS ALT2 TSL 3 BASIC5.3□□□□□ -1.56
Msh4Q99MT2 AC129935.1-201ENSMUST00000226302 873 ntBASIC5.3□□□□□ -1.56
Msh4Q99MT2 Ly96-201ENSMUST00000026881 632 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Msh4Q99MT2 Olfr907-201ENSMUST00000052901 933 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Msh4Q99MT2 C2cd6b-201ENSMUST00000054653 878 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Msh4Q99MT2 Prl2c1-201ENSMUST00000054932 681 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
Msh4Q99MT2 Rybp-ps-201ENSMUST00000069489 681 ntBASIC5.3□□□□□ -1.56
Msh4Q99MT2 Olfr740-201ENSMUST00000089838 936 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Msh4Q99MT2 Spint3-201ENSMUST00000099097 557 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Msh4Q99MT2 Olfr1111-201ENSMUST00000099860 940 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Msh4Q99MT2 Adam39-201ENSMUST00000066814 2636 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Msh4Q99MT2 Vmn1r27-202ENSMUST00000226666 2969 ntAPPRIS ALT2 BASIC5.3□□□□□ -1.56
Msh4Q99MT2 Enpp2-203ENSMUST00000171545 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Msh4Q99MT2 Olfr57-202ENSMUST00000203906 1647 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Msh4Q99MT2 Polk-201ENSMUST00000022172 4225 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Msh4Q99MT2 Gm3696-201ENSMUST00000167923 1814 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Msh4Q99MT2 Olfr1499-202ENSMUST00000216659 1834 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Msh4Q99MT2 Olfr733-202ENSMUST00000214372 3530 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Msh4Q99MT2 Olfr351-203ENSMUST00000215137 2856 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Msh4Q99MT2 Gm21292-201ENSMUST00000171947 1563 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Msh4Q99MT2 Tbc1d32-201ENSMUST00000099739 7240 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Msh4Q99MT2 AC132852.1-201ENSMUST00000214683 2324 ntBASIC5.29□□□□□ -1.56
Msh4Q99MT2 Gm38351-201ENSMUST00000195466 2518 ntBASIC5.29□□□□□ -1.56
Msh4Q99MT2 Gm26523-201ENSMUST00000180713 1658 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Msh4Q99MT2 Gm28999-201ENSMUST00000188063 1498 ntTSL 5 BASIC5.29□□□□□ -1.56
Msh4Q99MT2 Gm28393-201ENSMUST00000191261 1498 ntTSL 5 BASIC5.29□□□□□ -1.56
Msh4Q99MT2 Gm38168-201ENSMUST00000191717 1493 ntTSL 5 BASIC5.29□□□□□ -1.56
Msh4Q99MT2 Gm37572-202ENSMUST00000194043 1493 ntTSL 5 BASIC5.29□□□□□ -1.56
Msh4Q99MT2 Zcchc9-ps-201ENSMUST00000117884 786 ntBASIC5.29□□□□□ -1.56
Msh4Q99MT2 Gm11774-201ENSMUST00000118601 293 ntBASIC5.29□□□□□ -1.56
Msh4Q99MT2 Gm7079-201ENSMUST00000119726 171 ntBASIC5.29□□□□□ -1.56
Msh4Q99MT2 Gm13259-201ENSMUST00000120792 456 ntBASIC5.29□□□□□ -1.56
Msh4Q99MT2 Rps11-ps2-201ENSMUST00000121547 456 ntBASIC5.29□□□□□ -1.56
Msh4Q99MT2 Gm16471-201ENSMUST00000121940 618 ntBASIC5.29□□□□□ -1.56
Msh4Q99MT2 Gm13470-201ENSMUST00000123911 421 ntTSL 2 BASIC5.29□□□□□ -1.56
Msh4Q99MT2 Gm15589-201ENSMUST00000144193 271 ntTSL 3 BASIC5.29□□□□□ -1.56
Msh4Q99MT2 Gm23233-201ENSMUST00000157301 137 ntBASIC5.29□□□□□ -1.56
Msh4Q99MT2 AC122858.3-202ENSMUST00000161721 433 ntTSL 5 BASIC5.29□□□□□ -1.56
Msh4Q99MT2 Ear-ps5-201ENSMUST00000164700 463 ntBASIC5.29□□□□□ -1.56
Msh4Q99MT2 Gm6872-201ENSMUST00000165001 700 ntBASIC5.29□□□□□ -1.56
Msh4Q99MT2 Gm3486-201ENSMUST00000169361 883 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Msh4Q99MT2 Gm4181-201ENSMUST00000170249 898 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Msh4Q99MT2 Gm17268-201ENSMUST00000171515 66 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Msh4Q99MT2 Vmn2r-ps72-201ENSMUST00000172586 907 ntBASIC5.29□□□□□ -1.56
Msh4Q99MT2 Olfr762-ps1-201ENSMUST00000172948 927 ntBASIC5.29□□□□□ -1.56
Msh4Q99MT2 Gm21917-201ENSMUST00000177831 666 ntTSL 2 BASIC5.29□□□□□ -1.56
Msh4Q99MT2 Gm21860-201ENSMUST00000177893 309 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Msh4Q99MT2 Gm21748-201ENSMUST00000179623 309 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Msh4Q99MT2 Prl3c1-201ENSMUST00000018066 823 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
Msh4Q99MT2 Mrps36-ps3-201ENSMUST00000183899 305 ntBASIC5.29□□□□□ -1.56
Msh4Q99MT2 Scgb2b31-ps-201ENSMUST00000188734 328 ntBASIC5.29□□□□□ -1.56
Msh4Q99MT2 Gm29376-201ENSMUST00000189357 835 ntBASIC5.29□□□□□ -1.56
Msh4Q99MT2 Scgb2b32-ps-201ENSMUST00000190326 337 ntBASIC5.29□□□□□ -1.56
Msh4Q99MT2 Gm28792-201ENSMUST00000191482 419 ntTSL 3 BASIC5.29□□□□□ -1.56
Msh4Q99MT2 Gm19231-201ENSMUST00000193212 830 ntBASIC5.29□□□□□ -1.56
Msh4Q99MT2 Gm29678-201ENSMUST00000193966 1134 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Msh4Q99MT2 Gm38670-201ENSMUST00000199248 77 ntBASIC5.29□□□□□ -1.56
Msh4Q99MT2 Gm8039-201ENSMUST00000204758 712 ntBASIC5.29□□□□□ -1.56
Msh4Q99MT2 Gm45075-201ENSMUST00000208426 649 ntTSL 3 BASIC5.29□□□□□ -1.56
Msh4Q99MT2 Gm4587-201ENSMUST00000209135 637 ntBASIC5.29□□□□□ -1.56
Msh4Q99MT2 Gm17911-201ENSMUST00000210806 877 ntBASIC5.29□□□□□ -1.56
Msh4Q99MT2 Gm6145-205ENSMUST00000211114 1148 ntTSL 5 BASIC5.29□□□□□ -1.56
Msh4Q99MT2 Gm45524-201ENSMUST00000211374 1250 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Msh4Q99MT2 Gm45551-201ENSMUST00000211459 928 ntBASIC5.29□□□□□ -1.56
Msh4Q99MT2 AC113305.1-201ENSMUST00000214664 724 ntBASIC5.29□□□□□ -1.56
Msh4Q99MT2 Gm9269-201ENSMUST00000221661 578 ntBASIC5.29□□□□□ -1.56
Msh4Q99MT2 CT025611.1-201ENSMUST00000222537 906 ntTSL 5 BASIC5.29□□□□□ -1.56
Msh4Q99MT2 AC134860.4-201ENSMUST00000223592 978 ntBASIC5.29□□□□□ -1.56
Msh4Q99MT2 AC122858.1-201ENSMUST00000226212 433 ntBASIC5.29□□□□□ -1.56
Msh4Q99MT2 AC122858.3-201ENSMUST00000226341 740 ntBASIC5.29□□□□□ -1.56
Msh4Q99MT2 AC130673.2-201ENSMUST00000228091 797 ntBASIC5.29□□□□□ -1.56
Msh4Q99MT2 AC157572.4-201ENSMUST00000228203 549 ntBASIC5.29□□□□□ -1.56
Msh4Q99MT2 AC122858.1-202ENSMUST00000228290 986 ntBASIC5.29□□□□□ -1.56
Msh4Q99MT2 Vmn1r89-201ENSMUST00000053008 951 ntAPPRIS P2 BASIC5.29□□□□□ -1.56
Msh4Q99MT2 Olfr843-201ENSMUST00000061365 1107 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Msh4Q99MT2 Gm22043-201ENSMUST00000082993 158 ntBASIC5.29□□□□□ -1.56
Msh4Q99MT2 Spink11-201ENSMUST00000097587 746 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Msh4Q99MT2 Vmn1r71-210ENSMUST00000228561 4747 ntAPPRIS ALT2 BASIC5.29□□□□□ -1.56
Msh4Q99MT2 Gm26791-201ENSMUST00000180942 1605 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Msh4Q99MT2 Itih4-203ENSMUST00000120269 3531 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
Msh4Q99MT2 Olfr1140-201ENSMUST00000214723 1421 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Msh4Q99MT2 AC115910.1-201ENSMUST00000221188 4275 ntBASIC5.29□□□□□ -1.56
Msh4Q99MT2 Gm42436-201ENSMUST00000198804 3656 ntBASIC5.29□□□□□ -1.56
Msh4Q99MT2 Mdn1-211ENSMUST00000178134 17959 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
Msh4Q99MT2 Dock10-205ENSMUST00000187774 6796 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Msh4Q99MT2 Gabrg2-203ENSMUST00000109290 2868 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Msh4Q99MT2 6820402A03Rik-201ENSMUST00000194648 2654 ntBASIC5.29□□□□□ -1.56
Msh4Q99MT2 Zfp229-203ENSMUST00000182603 4315 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Msh4Q99MT2 Sirpb1c-203ENSMUST00000108350 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 85.7 ms