Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm23440-201ENSMUST00000104299 130 ntBASIC5.55□□□□□ -1.52
Clrn1Q8K445 1700006E09Rik-201ENSMUST00000010985 698 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Clrn1Q8K445 Olfr1144-ps1-201ENSMUST00000118227 328 ntBASIC5.55□□□□□ -1.52
Clrn1Q8K445 Vmn1r-ps2-201ENSMUST00000118464 834 ntBASIC5.55□□□□□ -1.52
Clrn1Q8K445 Gm6744-201ENSMUST00000119303 543 ntBASIC5.55□□□□□ -1.52
Clrn1Q8K445 Gm11260-201ENSMUST00000121163 942 ntBASIC5.55□□□□□ -1.52
Clrn1Q8K445 Snrpert-201ENSMUST00000121967 279 ntBASIC5.55□□□□□ -1.52
Clrn1Q8K445 Gm25782-201ENSMUST00000122526 289 ntBASIC5.55□□□□□ -1.52
Clrn1Q8K445 n-R5s19-201ENSMUST00000122793 120 ntBASIC5.55□□□□□ -1.52
Clrn1Q8K445 Pard3bos2-201ENSMUST00000127498 770 ntTSL 3 BASIC5.55□□□□□ -1.52
Clrn1Q8K445 Gm11731-201ENSMUST00000139704 670 ntTSL 3 BASIC5.55□□□□□ -1.52
Clrn1Q8K445 4930423M02Rik-202ENSMUST00000156903 1205 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Clrn1Q8K445 Gm23896-201ENSMUST00000158109 130 ntBASIC5.55□□□□□ -1.52
Clrn1Q8K445 R3hcc1l-202ENSMUST00000160107 950 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
Clrn1Q8K445 Vmn1r115-201ENSMUST00000169374 888 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Clrn1Q8K445 Gm20795-201ENSMUST00000178528 699 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Clrn1Q8K445 Gm27861-201ENSMUST00000183920 214 ntBASIC5.55□□□□□ -1.52
Clrn1Q8K445 Mir6989-201ENSMUST00000184812 65 ntBASIC5.55□□□□□ -1.52
Clrn1Q8K445 Gm28560-201ENSMUST00000186091 315 ntBASIC5.55□□□□□ -1.52
Clrn1Q8K445 Gm28334-201ENSMUST00000186653 315 ntBASIC5.55□□□□□ -1.52
Clrn1Q8K445 Gm28495-201ENSMUST00000188452 315 ntBASIC5.55□□□□□ -1.52
Clrn1Q8K445 Gm28217-201ENSMUST00000188613 648 ntTSL 5 BASIC5.55□□□□□ -1.52
Clrn1Q8K445 Gm28232-201ENSMUST00000188683 315 ntBASIC5.55□□□□□ -1.52
Clrn1Q8K445 Gm28481-201ENSMUST00000189231 315 ntBASIC5.55□□□□□ -1.52
Clrn1Q8K445 Gm29059-201ENSMUST00000191534 315 ntBASIC5.55□□□□□ -1.52
Clrn1Q8K445 Gm37765-201ENSMUST00000192395 315 ntBASIC5.55□□□□□ -1.52
Clrn1Q8K445 Gm37237-201ENSMUST00000192893 315 ntBASIC5.55□□□□□ -1.52
Clrn1Q8K445 Gm37710-201ENSMUST00000193501 1274 ntBASIC5.55□□□□□ -1.52
Clrn1Q8K445 Gm36968-201ENSMUST00000193737 315 ntBASIC5.55□□□□□ -1.52
Clrn1Q8K445 Ighv1-10-201ENSMUST00000194372 355 ntBASIC5.55□□□□□ -1.52
Clrn1Q8K445 Gm38290-201ENSMUST00000195238 315 ntBASIC5.55□□□□□ -1.52
Clrn1Q8K445 Igkv13-57-2-201ENSMUST00000196590 336 ntBASIC5.55□□□□□ -1.52
Clrn1Q8K445 Ube2l3-ps1-201ENSMUST00000199777 436 ntBASIC5.55□□□□□ -1.52
Clrn1Q8K445 Spam1-202ENSMUST00000202331 2100 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Clrn1Q8K445 Gm45157-201ENSMUST00000208729 401 ntBASIC5.55□□□□□ -1.52
Clrn1Q8K445 Gm6145-205ENSMUST00000211114 1148 ntTSL 5 BASIC5.55□□□□□ -1.52
Clrn1Q8K445 4930567H12Rik-202ENSMUST00000212512 766 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Clrn1Q8K445 Olfr1273-ps-201ENSMUST00000214356 4698 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
Clrn1Q8K445 Olfr1005-ps1-201ENSMUST00000216207 488 ntBASIC5.55□□□□□ -1.52
Clrn1Q8K445 AC174776.1-201ENSMUST00000221509 405 ntBASIC5.55□□□□□ -1.52
Clrn1Q8K445 AC174776.2-201ENSMUST00000222561 405 ntBASIC5.55□□□□□ -1.52
Clrn1Q8K445 CT033781.1-201ENSMUST00000223128 454 ntTSL 5 BASIC5.55□□□□□ -1.52
Clrn1Q8K445 Gm7550-201ENSMUST00000223334 282 ntTSL 5 BASIC5.55□□□□□ -1.52
Clrn1Q8K445 AC158981.3-202ENSMUST00000228906 523 ntBASIC5.55□□□□□ -1.52
Clrn1Q8K445 Cst12-201ENSMUST00000028932 644 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Clrn1Q8K445 Tex36-201ENSMUST00000033275 958 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Clrn1Q8K445 Olfr459-201ENSMUST00000050412 1109 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Clrn1Q8K445 Sprr2k-201ENSMUST00000067102 637 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Clrn1Q8K445 Olfr798-201ENSMUST00000079810 936 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Clrn1Q8K445 Gm24921-201ENSMUST00000083024 107 ntBASIC5.55□□□□□ -1.52
Clrn1Q8K445 Mup13-202ENSMUST00000098042 984 ntAPPRIS P3 TSL 5 BASIC5.55□□□□□ -1.52
Clrn1Q8K445 Olfr1181-201ENSMUST00000099823 936 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Clrn1Q8K445 Gm43498-201ENSMUST00000202002 1486 ntBASIC5.55□□□□□ -1.52
Clrn1Q8K445 Fam35a-206ENSMUST00000228626 3100 ntBASIC5.55□□□□□ -1.52
Clrn1Q8K445 Gm43490-201ENSMUST00000197593 2652 ntBASIC5.55□□□□□ -1.52
Clrn1Q8K445 Agps-203ENSMUST00000175646 1839 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
Clrn1Q8K445 Dennd4c-204ENSMUST00000142837 5870 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Clrn1Q8K445 Vmn2r104-201ENSMUST00000168050 2583 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Clrn1Q8K445 Usp29-204ENSMUST00000200535 7540 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Clrn1Q8K445 Ereg-201ENSMUST00000031324 4128 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Clrn1Q8K445 Kmt2d-201ENSMUST00000023741 19823 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
Clrn1Q8K445 Gm5930-201ENSMUST00000111863 1746 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Clrn1Q8K445 Clock-204ENSMUST00000202122 5508 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Clrn1Q8K445 D730048I06Rik-201ENSMUST00000034619 1334 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Clrn1Q8K445 Syt4-201ENSMUST00000025110 3901 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Clrn1Q8K445 Lgi1-207ENSMUST00000198518 7780 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Clrn1Q8K445 Myo1b-204ENSMUST00000114541 4616 ntTSL 5 BASIC5.54□□□□□ -1.52
Clrn1Q8K445 Olfr1131-203ENSMUST00000216756 1459 ntTSL 3 BASIC5.54□□□□□ -1.52
Clrn1Q8K445 Olfr994-204ENSMUST00000217218 1460 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
Clrn1Q8K445 Vmn2r61-201ENSMUST00000166131 2598 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Clrn1Q8K445 AC151530.1-203ENSMUST00000223343 2591 ntTSL 5 BASIC5.54□□□□□ -1.52
Clrn1Q8K445 AC133498.1-201ENSMUST00000222871 2925 ntTSL 5 BASIC5.54□□□□□ -1.52
Clrn1Q8K445 Hyal5-201ENSMUST00000031689 1838 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Clrn1Q8K445 Igkv4-79-201ENSMUST00000103342 358 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Clrn1Q8K445 Igkv4-68-201ENSMUST00000103350 394 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Clrn1Q8K445 Igkv4-59-201ENSMUST00000103354 368 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Clrn1Q8K445 Gm24935-201ENSMUST00000103770 110 ntBASIC5.54□□□□□ -1.52
Clrn1Q8K445 Gm25917-201ENSMUST00000104267 130 ntBASIC5.54□□□□□ -1.52
Clrn1Q8K445 Gm22019-201ENSMUST00000104359 96 ntBASIC5.54□□□□□ -1.52
Clrn1Q8K445 Gm5751-201ENSMUST00000115561 444 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Clrn1Q8K445 Gm12077-201ENSMUST00000117049 364 ntBASIC5.54□□□□□ -1.52
Clrn1Q8K445 Gm11719-201ENSMUST00000119399 351 ntBASIC5.54□□□□□ -1.52
Clrn1Q8K445 Gm14998-201ENSMUST00000120502 495 ntBASIC5.54□□□□□ -1.52
Clrn1Q8K445 Gm12880-201ENSMUST00000120652 494 ntBASIC5.54□□□□□ -1.52
Clrn1Q8K445 Gm22478-201ENSMUST00000122570 154 ntBASIC5.54□□□□□ -1.52
Clrn1Q8K445 Gm16346-201ENSMUST00000129158 937 ntTSL 5 BASIC5.54□□□□□ -1.52
Clrn1Q8K445 Saxo1os-201ENSMUST00000131790 628 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Clrn1Q8K445 Fundc1-203ENSMUST00000142638 597 ntTSL 3 BASIC5.54□□□□□ -1.52
Clrn1Q8K445 Gm25826-201ENSMUST00000157090 137 ntBASIC5.54□□□□□ -1.52
Clrn1Q8K445 Gm24741-201ENSMUST00000158857 106 ntBASIC5.54□□□□□ -1.52
Clrn1Q8K445 Sult2a4-202ENSMUST00000165167 964 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
Clrn1Q8K445 Scgb1b20-201ENSMUST00000166714 421 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
Clrn1Q8K445 Gm4845-201ENSMUST00000179202 562 ntBASIC5.54□□□□□ -1.52
Clrn1Q8K445 1700010L04Rik-203ENSMUST00000179662 1015 ntTSL 5 BASIC5.54□□□□□ -1.52
Clrn1Q8K445 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC5.54□□□□□ -1.52
Clrn1Q8K445 Gm29563-201ENSMUST00000187249 496 ntBASIC5.54□□□□□ -1.52
Clrn1Q8K445 Gm28597-201ENSMUST00000187664 666 ntBASIC5.54□□□□□ -1.52
Clrn1Q8K445 Gm28066-201ENSMUST00000188657 472 ntBASIC5.54□□□□□ -1.52
Clrn1Q8K445 Mrgprb9-ps-201ENSMUST00000188739 892 ntBASIC5.54□□□□□ -1.52
Clrn1Q8K445 Gm29545-201ENSMUST00000188878 694 ntBASIC5.54□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms