Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Olfr477-202ENSMUST00000214677 2930 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Brf1Q8CFK2 AI838599-201ENSMUST00000133960 2953 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Brf1Q8CFK2 Gm15328-201ENSMUST00000144006 2977 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Brf1Q8CFK2 Iqch-204ENSMUST00000163982 3375 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
Brf1Q8CFK2 Zbed4-ps2-201ENSMUST00000187003 3448 ntBASIC6.44□□□□□ -1.38
Brf1Q8CFK2 Macrod2-203ENSMUST00000110061 887 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Brf1Q8CFK2 Hspe1-ps5-201ENSMUST00000118080 297 ntBASIC6.44□□□□□ -1.38
Brf1Q8CFK2 Gm14388-201ENSMUST00000118119 477 ntBASIC6.44□□□□□ -1.38
Brf1Q8CFK2 Gm2003-201ENSMUST00000118537 636 ntBASIC6.44□□□□□ -1.38
Brf1Q8CFK2 Gm14521-201ENSMUST00000119545 350 ntBASIC6.44□□□□□ -1.38
Brf1Q8CFK2 Gm1989-201ENSMUST00000126244 636 ntBASIC6.44□□□□□ -1.38
Brf1Q8CFK2 Gm15868-201ENSMUST00000144291 520 ntTSL 5 BASIC6.44□□□□□ -1.38
Brf1Q8CFK2 Gm14223-201ENSMUST00000146060 517 ntTSL 3 BASIC6.44□□□□□ -1.38
Brf1Q8CFK2 Atxn3-204ENSMUST00000160251 998 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Brf1Q8CFK2 Gm15716-201ENSMUST00000162457 404 ntTSL 3 BASIC6.44□□□□□ -1.38
Brf1Q8CFK2 Eif3s6-ps2-201ENSMUST00000163304 219 ntBASIC6.44□□□□□ -1.38
Brf1Q8CFK2 Gm22392-201ENSMUST00000177971 107 ntBASIC6.44□□□□□ -1.38
Brf1Q8CFK2 4930445N18Rik-201ENSMUST00000180631 886 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Brf1Q8CFK2 Gm29405-201ENSMUST00000187204 370 ntTSL 5 BASIC6.44□□□□□ -1.38
Brf1Q8CFK2 Gm29557-201ENSMUST00000188245 370 ntTSL 5 BASIC6.44□□□□□ -1.38
Brf1Q8CFK2 1700022E09Rik-202ENSMUST00000188342 387 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Brf1Q8CFK2 1700020G17Rik-202ENSMUST00000190237 739 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Brf1Q8CFK2 Gm28174-201ENSMUST00000191003 370 ntTSL 5 BASIC6.44□□□□□ -1.38
Brf1Q8CFK2 4930433B08Rik-201ENSMUST00000192010 644 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Brf1Q8CFK2 Gm37438-201ENSMUST00000192813 393 ntBASIC6.44□□□□□ -1.38
Brf1Q8CFK2 Gm37681-201ENSMUST00000193880 727 ntBASIC6.44□□□□□ -1.38
Brf1Q8CFK2 Gm37445-201ENSMUST00000195318 242 ntBASIC6.44□□□□□ -1.38
Brf1Q8CFK2 Igkv15-101-201ENSMUST00000195917 299 ntBASIC6.44□□□□□ -1.38
Brf1Q8CFK2 Gm8861-201ENSMUST00000196346 832 ntBASIC6.44□□□□□ -1.38
Brf1Q8CFK2 Gm9332-201ENSMUST00000198431 730 ntBASIC6.44□□□□□ -1.38
Brf1Q8CFK2 Gm42976-201ENSMUST00000200313 222 ntBASIC6.44□□□□□ -1.38
Brf1Q8CFK2 Gm43596-201ENSMUST00000202818 884 ntBASIC6.44□□□□□ -1.38
Brf1Q8CFK2 Olfr563-ps1-201ENSMUST00000210909 873 ntBASIC6.44□□□□□ -1.38
Brf1Q8CFK2 Gm33178-201ENSMUST00000212090 257 ntBASIC6.44□□□□□ -1.38
Brf1Q8CFK2 AC107808.2-201ENSMUST00000213542 1027 ntTSL 5 BASIC6.44□□□□□ -1.38
Brf1Q8CFK2 AC173345.3-201ENSMUST00000221245 1093 ntBASIC6.44□□□□□ -1.38
Brf1Q8CFK2 AC158981.3-201ENSMUST00000226844 1024 ntBASIC6.44□□□□□ -1.38
Brf1Q8CFK2 AC157572.4-201ENSMUST00000228203 549 ntBASIC6.44□□□□□ -1.38
Brf1Q8CFK2 AC154239.1-201ENSMUST00000228565 406 ntBASIC6.44□□□□□ -1.38
Brf1Q8CFK2 Olfr1367-201ENSMUST00000059216 1055 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Brf1Q8CFK2 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Brf1Q8CFK2 Gm25139-201ENSMUST00000083247 210 ntBASIC6.44□□□□□ -1.38
Brf1Q8CFK2 Mir129-2-201ENSMUST00000083577 90 ntBASIC6.44□□□□□ -1.38
Brf1Q8CFK2 Mir218-2-201ENSMUST00000083649 110 ntBASIC6.44□□□□□ -1.38
Brf1Q8CFK2 Vmn1r36-203ENSMUST00000226728 1458 ntBASIC6.44□□□□□ -1.38
Brf1Q8CFK2 Olfr703-202ENSMUST00000216254 1920 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Brf1Q8CFK2 Ctsm-202ENSMUST00000223778 1905 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Brf1Q8CFK2 Vmn2r124-201ENSMUST00000176802 2568 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Brf1Q8CFK2 Gm3182-201ENSMUST00000167902 1753 ntAPPRIS P5 TSL 5 BASIC6.44□□□□□ -1.38
Brf1Q8CFK2 Lypd6-205ENSMUST00000169232 3499 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Brf1Q8CFK2 Zfp456-201ENSMUST00000057070 4126 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Brf1Q8CFK2 Olfr684-203ENSMUST00000215744 3084 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Brf1Q8CFK2 Gm18852-201ENSMUST00000184149 3593 ntBASIC6.43□□□□□ -1.38
Brf1Q8CFK2 Gm35842-201ENSMUST00000207859 4464 ntTSL 5 BASIC6.43□□□□□ -1.38
Brf1Q8CFK2 Gm37760-201ENSMUST00000194726 3841 ntBASIC6.43□□□□□ -1.38
Brf1Q8CFK2 Ktn1-221ENSMUST00000190535 4112 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
Brf1Q8CFK2 A730020M07Rik-202ENSMUST00000196621 2370 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Brf1Q8CFK2 D030045P18Rik-202ENSMUST00000213571 2370 ntBASIC6.43□□□□□ -1.38
Brf1Q8CFK2 Gm38248-201ENSMUST00000193744 5783 ntBASIC6.43□□□□□ -1.38
Brf1Q8CFK2 Usp46-202ENSMUST00000119154 4738 ntTSL 5 BASIC6.43□□□□□ -1.38
Brf1Q8CFK2 Igkv4-71-201ENSMUST00000101325 288 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Brf1Q8CFK2 Traj16-201ENSMUST00000103725 61 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Brf1Q8CFK2 Gm24230-201ENSMUST00000104313 129 ntBASIC6.43□□□□□ -1.38
Brf1Q8CFK2 Kpna2-202ENSMUST00000106768 541 ntTSL 2 BASIC6.43□□□□□ -1.38
Brf1Q8CFK2 Gm16383-201ENSMUST00000118122 232 ntBASIC6.43□□□□□ -1.38
Brf1Q8CFK2 Gm14610-201ENSMUST00000118358 966 ntBASIC6.43□□□□□ -1.38
Brf1Q8CFK2 Zfp389-201ENSMUST00000118425 675 ntBASIC6.43□□□□□ -1.38
Brf1Q8CFK2 Xlr3e-ps-201ENSMUST00000119644 682 ntBASIC6.43□□□□□ -1.38
Brf1Q8CFK2 Gm13367-201ENSMUST00000119955 796 ntBASIC6.43□□□□□ -1.38
Brf1Q8CFK2 Gm14831-201ENSMUST00000120253 409 ntBASIC6.43□□□□□ -1.38
Brf1Q8CFK2 Xlr3d-ps-201ENSMUST00000121687 658 ntBASIC6.43□□□□□ -1.38
Brf1Q8CFK2 Gm13062-201ENSMUST00000151337 562 ntTSL 3 BASIC6.43□□□□□ -1.38
Brf1Q8CFK2 Gm26086-201ENSMUST00000157902 263 ntBASIC6.43□□□□□ -1.38
Brf1Q8CFK2 Gm24295-201ENSMUST00000158298 131 ntBASIC6.43□□□□□ -1.38
Brf1Q8CFK2 Gm17038-201ENSMUST00000166586 494 ntBASIC6.43□□□□□ -1.38
Brf1Q8CFK2 Gm17907-201ENSMUST00000173150 710 ntBASIC6.43□□□□□ -1.38
Brf1Q8CFK2 Gm18560-201ENSMUST00000173463 1123 ntBASIC6.43□□□□□ -1.38
Brf1Q8CFK2 Gm25120-201ENSMUST00000180148 79 ntBASIC6.43□□□□□ -1.38
Brf1Q8CFK2 1700101I11Rik-201ENSMUST00000181594 896 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Brf1Q8CFK2 Gm27817-201ENSMUST00000184302 233 ntBASIC6.43□□□□□ -1.38
Brf1Q8CFK2 Gm27715-201ENSMUST00000184714 260 ntBASIC6.43□□□□□ -1.38
Brf1Q8CFK2 Gm28998-201ENSMUST00000186194 919 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Brf1Q8CFK2 Gm28576-201ENSMUST00000189007 919 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Brf1Q8CFK2 Gm38213-201ENSMUST00000193203 173 ntBASIC6.43□□□□□ -1.38
Brf1Q8CFK2 Gm38333-201ENSMUST00000193608 604 ntBASIC6.43□□□□□ -1.38
Brf1Q8CFK2 Gm42610-201ENSMUST00000196557 650 ntTSL 3 BASIC6.43□□□□□ -1.38
Brf1Q8CFK2 Gm43104-201ENSMUST00000197234 311 ntBASIC6.43□□□□□ -1.38
Brf1Q8CFK2 Gm5288-201ENSMUST00000198323 1119 ntBASIC6.43□□□□□ -1.38
Brf1Q8CFK2 Gm45908-201ENSMUST00000212977 1177 ntBASIC6.43□□□□□ -1.38
Brf1Q8CFK2 Gm45777-201ENSMUST00000213009 301 ntBASIC6.43□□□□□ -1.38
Brf1Q8CFK2 Gm36543-201ENSMUST00000217933 542 ntTSL 5 BASIC6.43□□□□□ -1.38
Brf1Q8CFK2 AC127337.1-201ENSMUST00000220423 625 ntTSL 2 BASIC6.43□□□□□ -1.38
Brf1Q8CFK2 Vmn1r39-202ENSMUST00000226783 918 ntAPPRIS P2 BASIC6.43□□□□□ -1.38
Brf1Q8CFK2 Magea4-201ENSMUST00000048675 948 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Brf1Q8CFK2 Olfr843-201ENSMUST00000061365 1107 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Brf1Q8CFK2 Olfr971-201ENSMUST00000075467 924 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Brf1Q8CFK2 Tpbpb-201ENSMUST00000080766 850 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Brf1Q8CFK2 Gm23330-201ENSMUST00000082660 164 ntBASIC6.43□□□□□ -1.38
Brf1Q8CFK2 Olfr1218-201ENSMUST00000099798 936 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Brf1Q8CFK2 Dock10-205ENSMUST00000187774 6796 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms