Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Gm14957-201ENSMUST00000121069 817 ntBASIC5□□□□□ -1.61
Ccdc28bQ8CEG5 Gm24371-201ENSMUST00000122662 267 ntBASIC5□□□□□ -1.61
Ccdc28bQ8CEG5 Gm6938-201ENSMUST00000123014 771 ntTSL 3 BASIC5□□□□□ -1.61
Ccdc28bQ8CEG5 Gm13708-201ENSMUST00000145170 390 ntTSL 5 BASIC5□□□□□ -1.61
Ccdc28bQ8CEG5 Gm23965-201ENSMUST00000157969 142 ntBASIC5□□□□□ -1.61
Ccdc28bQ8CEG5 Gm24731-201ENSMUST00000158227 131 ntBASIC5□□□□□ -1.61
Ccdc28bQ8CEG5 Gm2877-201ENSMUST00000178248 1204 ntBASIC5□□□□□ -1.61
Ccdc28bQ8CEG5 Gm8324-201ENSMUST00000178911 1204 ntBASIC5□□□□□ -1.61
Ccdc28bQ8CEG5 Gm21971-201ENSMUST00000180187 337 ntTSL 5 BASIC5□□□□□ -1.61
Ccdc28bQ8CEG5 2610027F03Rik-201ENSMUST00000185443 530 ntTSL 5 BASIC5□□□□□ -1.61
Ccdc28bQ8CEG5 1700031M16Rik-204ENSMUST00000189724 824 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
Ccdc28bQ8CEG5 Gm28745-201ENSMUST00000190069 305 ntBASIC5□□□□□ -1.61
Ccdc28bQ8CEG5 1700031M16Rik-207ENSMUST00000191513 847 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
Ccdc28bQ8CEG5 Trdv3-201ENSMUST00000198551 309 ntBASIC5□□□□□ -1.61
Ccdc28bQ8CEG5 1300002E11Rik-206ENSMUST00000209728 701 ntTSL 2 BASIC5□□□□□ -1.61
Ccdc28bQ8CEG5 Gm39336-201ENSMUST00000214933 260 ntTSL 3 BASIC5□□□□□ -1.61
Ccdc28bQ8CEG5 Gm3942-201ENSMUST00000218495 666 ntTSL 1 (best) BASIC5□□□□□ -1.61
Ccdc28bQ8CEG5 Olfr516-201ENSMUST00000071410 945 ntAPPRIS P1 BASIC5□□□□□ -1.61
Ccdc28bQ8CEG5 Gm10145-201ENSMUST00000077776 462 ntBASIC5□□□□□ -1.61
Ccdc28bQ8CEG5 Olfr671-201ENSMUST00000078710 942 ntAPPRIS P1 BASIC5□□□□□ -1.61
Ccdc28bQ8CEG5 Stxbp3-ps-201ENSMUST00000090527 758 ntBASIC5□□□□□ -1.61
Ccdc28bQ8CEG5 Ano5-203ENSMUST00000207717 2753 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Ccdc28bQ8CEG5 Gm37733-201ENSMUST00000195478 2962 ntBASIC5□□□□□ -1.61
Ccdc28bQ8CEG5 Cyp3a57-201ENSMUST00000079268 1986 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Ccdc28bQ8CEG5 Gm16513-201ENSMUST00000101023 2832 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Ccdc28bQ8CEG5 Gm30332-201ENSMUST00000204221 2345 ntTSL 1 (best) BASIC5□□□□□ -1.61
Ccdc28bQ8CEG5 A330076H08Rik-202ENSMUST00000207694 1836 ntTSL 1 (best) BASIC5□□□□□ -1.61
Ccdc28bQ8CEG5 Gm13089-201ENSMUST00000073532 1807 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Ccdc28bQ8CEG5 A530083M17Rik-201ENSMUST00000199877 3376 ntBASIC4.99□□□□□ -1.61
Ccdc28bQ8CEG5 Gm28441-201ENSMUST00000190927 1343 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Ccdc28bQ8CEG5 Gm43121-201ENSMUST00000199065 1305 ntBASIC4.99□□□□□ -1.61
Ccdc28bQ8CEG5 Cnot4-206ENSMUST00000202143 3202 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Ccdc28bQ8CEG5 Olfr1493-ps1-201ENSMUST00000207208 1777 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Ccdc28bQ8CEG5 Gm36529-201ENSMUST00000222495 1529 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Ccdc28bQ8CEG5 Vmn2r110-201ENSMUST00000169559 2577 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Ccdc28bQ8CEG5 4930503E14Rik-201ENSMUST00000100688 1287 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Ccdc28bQ8CEG5 Gm26078-201ENSMUST00000104067 128 ntBASIC4.99□□□□□ -1.61
Ccdc28bQ8CEG5 Gm14575-201ENSMUST00000117210 560 ntBASIC4.99□□□□□ -1.61
Ccdc28bQ8CEG5 Gm12760-201ENSMUST00000117861 482 ntBASIC4.99□□□□□ -1.61
Ccdc28bQ8CEG5 Gm12039-201ENSMUST00000118219 180 ntBASIC4.99□□□□□ -1.61
Ccdc28bQ8CEG5 Gm14655-201ENSMUST00000120124 578 ntBASIC4.99□□□□□ -1.61
Ccdc28bQ8CEG5 Gm13259-201ENSMUST00000120792 456 ntBASIC4.99□□□□□ -1.61
Ccdc28bQ8CEG5 Gm11848-201ENSMUST00000121207 973 ntBASIC4.99□□□□□ -1.61
Ccdc28bQ8CEG5 Gm12140-201ENSMUST00000121214 544 ntBASIC4.99□□□□□ -1.61
Ccdc28bQ8CEG5 Gm23837-201ENSMUST00000122656 286 ntBASIC4.99□□□□□ -1.61
Ccdc28bQ8CEG5 Gm14095-201ENSMUST00000134264 516 ntTSL 3 BASIC4.99□□□□□ -1.61
Ccdc28bQ8CEG5 Gm23896-201ENSMUST00000158109 130 ntBASIC4.99□□□□□ -1.61
Ccdc28bQ8CEG5 BC050972-202ENSMUST00000169153 467 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Ccdc28bQ8CEG5 Gm20490-201ENSMUST00000173622 198 ntTSL 5 BASIC4.99□□□□□ -1.61
Ccdc28bQ8CEG5 Obox3-ps2-201ENSMUST00000177243 1004 ntBASIC4.99□□□□□ -1.61
Ccdc28bQ8CEG5 Rpain-213ENSMUST00000178822 566 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Ccdc28bQ8CEG5 Gm2539-203ENSMUST00000181352 746 ntBASIC4.99□□□□□ -1.61
Ccdc28bQ8CEG5 1600010M07Rik-201ENSMUST00000185931 1204 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Ccdc28bQ8CEG5 Gm29097-201ENSMUST00000190273 422 ntBASIC4.99□□□□□ -1.61
Ccdc28bQ8CEG5 Gm38166-201ENSMUST00000191660 471 ntBASIC4.99□□□□□ -1.61
Ccdc28bQ8CEG5 Gm37070-201ENSMUST00000193272 460 ntBASIC4.99□□□□□ -1.61
Ccdc28bQ8CEG5 Gm8325-202ENSMUST00000193411 182 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Ccdc28bQ8CEG5 Gm37517-201ENSMUST00000194004 1289 ntBASIC4.99□□□□□ -1.61
Ccdc28bQ8CEG5 Gm37184-201ENSMUST00000194720 650 ntTSL 3 BASIC4.99□□□□□ -1.61
Ccdc28bQ8CEG5 9330198I05Rik-201ENSMUST00000196846 1095 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Ccdc28bQ8CEG5 Gm43049-202ENSMUST00000198942 559 ntTSL 2 BASIC4.99□□□□□ -1.61
Ccdc28bQ8CEG5 Gm19039-201ENSMUST00000204363 575 ntBASIC4.99□□□□□ -1.61
Ccdc28bQ8CEG5 Snhg1-207ENSMUST00000205909 709 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Ccdc28bQ8CEG5 Gm46223-201ENSMUST00000215196 675 ntBASIC4.99□□□□□ -1.61
Ccdc28bQ8CEG5 CAAA01216754.4-201ENSMUST00000216416 802 ntTSL 5 BASIC4.99□□□□□ -1.61
Ccdc28bQ8CEG5 9530050K03Rik-201ENSMUST00000221663 1299 ntBASIC4.99□□□□□ -1.61
Ccdc28bQ8CEG5 A930023M06Rik-201ENSMUST00000223270 1093 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Ccdc28bQ8CEG5 Gm2645-201ENSMUST00000223516 547 ntBASIC4.99□□□□□ -1.61
Ccdc28bQ8CEG5 Gm6195-201ENSMUST00000063059 357 ntBASIC4.99□□□□□ -1.61
Ccdc28bQ8CEG5 Gm16415-201ENSMUST00000080097 489 ntBASIC4.99□□□□□ -1.61
Ccdc28bQ8CEG5 Gm10916-201ENSMUST00000080330 483 ntBASIC4.99□□□□□ -1.61
Ccdc28bQ8CEG5 n-R5s215-201ENSMUST00000082480 104 ntBASIC4.99□□□□□ -1.61
Ccdc28bQ8CEG5 Gm25260-201ENSMUST00000083053 134 ntBASIC4.99□□□□□ -1.61
Ccdc28bQ8CEG5 Olfr275-201ENSMUST00000095085 960 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Ccdc28bQ8CEG5 Olfr695-201ENSMUST00000216868 3953 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Ccdc28bQ8CEG5 Olfr1290-204ENSMUST00000217611 2729 ntAPPRIS P1 TSL 3 BASIC4.99□□□□□ -1.61
Ccdc28bQ8CEG5 Plch1-209ENSMUST00000161052 1472 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Ccdc28bQ8CEG5 Gm34885-201ENSMUST00000217440 4070 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Ccdc28bQ8CEG5 Gda-202ENSMUST00000121725 2450 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Ccdc28bQ8CEG5 AC131329.1-201ENSMUST00000221204 3487 ntBASIC4.99□□□□□ -1.61
Ccdc28bQ8CEG5 Olfr1065-202ENSMUST00000216162 2148 ntAPPRIS P1 TSL 3 BASIC4.99□□□□□ -1.61
Ccdc28bQ8CEG5 Gm43668-201ENSMUST00000197014 5342 ntBASIC4.99□□□□□ -1.61
Ccdc28bQ8CEG5 Tfpi-205ENSMUST00000111717 2962 ntTSL 5 BASIC4.98□□□□□ -1.61
Ccdc28bQ8CEG5 Slc10a2-201ENSMUST00000023835 4152 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Ccdc28bQ8CEG5 Sema3a-201ENSMUST00000030714 5930 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Ccdc28bQ8CEG5 AC154313.1-201ENSMUST00000217755 3841 ntBASIC4.98□□□□□ -1.61
Ccdc28bQ8CEG5 Macc1-202ENSMUST00000221866 6937 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Ccdc28bQ8CEG5 Trbv12-2-201ENSMUST00000103269 385 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Ccdc28bQ8CEG5 Gm10552-201ENSMUST00000113396 372 ntBASIC4.98□□□□□ -1.61
Ccdc28bQ8CEG5 Cldn34d-201ENSMUST00000114054 1003 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Ccdc28bQ8CEG5 Gm13681-201ENSMUST00000117925 210 ntBASIC4.98□□□□□ -1.61
Ccdc28bQ8CEG5 Gm13491-201ENSMUST00000118267 235 ntBASIC4.98□□□□□ -1.61
Ccdc28bQ8CEG5 Gm13013-201ENSMUST00000119087 523 ntBASIC4.98□□□□□ -1.61
Ccdc28bQ8CEG5 Gm5392-201ENSMUST00000122189 789 ntBASIC4.98□□□□□ -1.61
Ccdc28bQ8CEG5 Gm12256-201ENSMUST00000132394 446 ntTSL 3 BASIC4.98□□□□□ -1.61
Ccdc28bQ8CEG5 Gm26372-201ENSMUST00000157831 236 ntBASIC4.98□□□□□ -1.61
Ccdc28bQ8CEG5 Ms4a2-202ENSMUST00000164792 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Ccdc28bQ8CEG5 Gm4831-201ENSMUST00000174626 594 ntBASIC4.98□□□□□ -1.61
Ccdc28bQ8CEG5 Gm3307-201ENSMUST00000176164 632 ntBASIC4.98□□□□□ -1.61
Ccdc28bQ8CEG5 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 74.2 ms