Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Gm22266-201ENSMUST00000104011 138 ntBASIC4.98□□□□□ -1.61
Lrif1Q8CDD9 Gm16205-201ENSMUST00000117720 1027 ntBASIC4.98□□□□□ -1.61
Lrif1Q8CDD9 Gm14790-201ENSMUST00000117760 1293 ntBASIC4.98□□□□□ -1.61
Lrif1Q8CDD9 Gm12039-201ENSMUST00000118219 180 ntBASIC4.98□□□□□ -1.61
Lrif1Q8CDD9 Gm14610-201ENSMUST00000118358 966 ntBASIC4.98□□□□□ -1.61
Lrif1Q8CDD9 Gm13488-201ENSMUST00000120419 179 ntBASIC4.98□□□□□ -1.61
Lrif1Q8CDD9 Gm6305-201ENSMUST00000121027 1012 ntBASIC4.98□□□□□ -1.61
Lrif1Q8CDD9 Tnfaip8-203ENSMUST00000126666 906 ntTSL 2 BASIC4.98□□□□□ -1.61
Lrif1Q8CDD9 Gm23069-201ENSMUST00000158240 311 ntBASIC4.98□□□□□ -1.61
Lrif1Q8CDD9 Mir1963-201ENSMUST00000158594 59 ntBASIC4.98□□□□□ -1.61
Lrif1Q8CDD9 Vmn1r175-201ENSMUST00000166141 915 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Lrif1Q8CDD9 Rps27-201ENSMUST00000170122 345 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Lrif1Q8CDD9 Gm5849-201ENSMUST00000180151 351 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
Lrif1Q8CDD9 Gm27541-201ENSMUST00000184078 122 ntBASIC4.98□□□□□ -1.61
Lrif1Q8CDD9 Ssxb8-202ENSMUST00000185125 559 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Lrif1Q8CDD9 Gm18558-201ENSMUST00000186253 1214 ntBASIC4.98□□□□□ -1.61
Lrif1Q8CDD9 Gm28750-201ENSMUST00000186327 658 ntTSL 5 BASIC4.98□□□□□ -1.61
Lrif1Q8CDD9 Gm28353-201ENSMUST00000186482 570 ntBASIC4.98□□□□□ -1.61
Lrif1Q8CDD9 Gm28533-201ENSMUST00000186741 570 ntBASIC4.98□□□□□ -1.61
Lrif1Q8CDD9 Gm21617-201ENSMUST00000188297 691 ntBASIC4.98□□□□□ -1.61
Lrif1Q8CDD9 Gm20830-202ENSMUST00000190426 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Lrif1Q8CDD9 Gm42952-201ENSMUST00000196393 731 ntTSL 2 BASIC4.98□□□□□ -1.61
Lrif1Q8CDD9 Mir409-201ENSMUST00000198153 79 ntBASIC4.98□□□□□ -1.61
Lrif1Q8CDD9 Gm15839-202ENSMUST00000211219 664 ntTSL 3 BASIC4.98□□□□□ -1.61
Lrif1Q8CDD9 AC142227.2-201ENSMUST00000220675 400 ntTSL 5 BASIC4.98□□□□□ -1.61
Lrif1Q8CDD9 BC049715-201ENSMUST00000052702 1120 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Lrif1Q8CDD9 1110012L19Rik-201ENSMUST00000053981 1094 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Lrif1Q8CDD9 Sprr3-201ENSMUST00000058142 1222 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
Lrif1Q8CDD9 A730045E13Rik-201ENSMUST00000066740 854 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Lrif1Q8CDD9 Olfr1537-201ENSMUST00000073248 945 ntAPPRIS P2 BASIC4.98□□□□□ -1.61
Lrif1Q8CDD9 Gm24919-201ENSMUST00000083020 106 ntBASIC4.98□□□□□ -1.61
Lrif1Q8CDD9 Mir188-201ENSMUST00000083464 68 ntBASIC4.98□□□□□ -1.61
Lrif1Q8CDD9 Mir365-2-201ENSMUST00000083555 112 ntBASIC4.98□□□□□ -1.61
Lrif1Q8CDD9 Gm21761-202ENSMUST00000187530 1374 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Lrif1Q8CDD9 Tsga10-203ENSMUST00000114902 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Lrif1Q8CDD9 Btbd35f28-201ENSMUST00000105015 1960 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Lrif1Q8CDD9 Btbd35f18-201ENSMUST00000105019 1960 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Lrif1Q8CDD9 Btbd35f11-201ENSMUST00000105020 1960 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Lrif1Q8CDD9 Btbd35f19-201ENSMUST00000178444 1960 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Lrif1Q8CDD9 Btbd35f20-201ENSMUST00000179325 1960 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Lrif1Q8CDD9 Gm43654-201ENSMUST00000200664 3417 ntBASIC4.98□□□□□ -1.61
Lrif1Q8CDD9 4932411N23Rik-201ENSMUST00000081074 3407 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Lrif1Q8CDD9 Gm14033-201ENSMUST00000128307 2265 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Lrif1Q8CDD9 Gm10471-201ENSMUST00000094946 2967 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Lrif1Q8CDD9 Mga-201ENSMUST00000046717 11982 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
Lrif1Q8CDD9 Gm43121-201ENSMUST00000199065 1305 ntBASIC4.97□□□□□ -1.61
Lrif1Q8CDD9 Gm5141-201ENSMUST00000167516 1743 ntTSL 5 BASIC4.97□□□□□ -1.61
Lrif1Q8CDD9 Gcc2-208ENSMUST00000162860 6400 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
Lrif1Q8CDD9 Acsm3-205ENSMUST00000106529 3295 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Lrif1Q8CDD9 Gm37514-201ENSMUST00000194512 2753 ntBASIC4.97□□□□□ -1.61
Lrif1Q8CDD9 Gm5117-201ENSMUST00000178878 2553 ntBASIC4.97□□□□□ -1.61
Lrif1Q8CDD9 Gm43266-201ENSMUST00000201049 1771 ntBASIC4.97□□□□□ -1.61
Lrif1Q8CDD9 1700017N19Rik-201ENSMUST00000041162 1691 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Lrif1Q8CDD9 Svs3a-202ENSMUST00000109370 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
Lrif1Q8CDD9 Fam107b-205ENSMUST00000115055 515 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
Lrif1Q8CDD9 Olfr405-ps1-201ENSMUST00000120649 936 ntBASIC4.97□□□□□ -1.61
Lrif1Q8CDD9 Gm24371-201ENSMUST00000122662 267 ntBASIC4.97□□□□□ -1.61
Lrif1Q8CDD9 Gm14582-201ENSMUST00000141697 1189 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Lrif1Q8CDD9 Gm14093-201ENSMUST00000145579 364 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Lrif1Q8CDD9 Gm15866-201ENSMUST00000149048 785 ntTSL 5 BASIC4.97□□□□□ -1.61
Lrif1Q8CDD9 Gm25824-201ENSMUST00000157092 121 ntBASIC4.97□□□□□ -1.61
Lrif1Q8CDD9 Gm25048-201ENSMUST00000158598 91 ntBASIC4.97□□□□□ -1.61
Lrif1Q8CDD9 Gm15657-203ENSMUST00000163077 779 ntTSL 3 BASIC4.97□□□□□ -1.61
Lrif1Q8CDD9 Gm4831-201ENSMUST00000174626 594 ntBASIC4.97□□□□□ -1.61
Lrif1Q8CDD9 Gm26731-201ENSMUST00000180683 543 ntBASIC4.97□□□□□ -1.61
Lrif1Q8CDD9 Gm28017-201ENSMUST00000183434 126 ntBASIC4.97□□□□□ -1.61
Lrif1Q8CDD9 Gm27201-201ENSMUST00000183818 416 ntTSL 3 BASIC4.97□□□□□ -1.61
Lrif1Q8CDD9 Gm28835-202ENSMUST00000189206 543 ntTSL 3 BASIC4.97□□□□□ -1.61
Lrif1Q8CDD9 Gm44485-201ENSMUST00000199569 137 ntBASIC4.97□□□□□ -1.61
Lrif1Q8CDD9 Gm44431-201ENSMUST00000203500 413 ntBASIC4.97□□□□□ -1.61
Lrif1Q8CDD9 Gm45157-201ENSMUST00000208729 401 ntBASIC4.97□□□□□ -1.61
Lrif1Q8CDD9 Gm45359-201ENSMUST00000210635 427 ntBASIC4.97□□□□□ -1.61
Lrif1Q8CDD9 Pln-204ENSMUST00000219491 771 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
Lrif1Q8CDD9 AC156572.1-201ENSMUST00000221040 1161 ntTSL 5 BASIC4.97□□□□□ -1.61
Lrif1Q8CDD9 Gm2645-201ENSMUST00000223516 547 ntBASIC4.97□□□□□ -1.61
Lrif1Q8CDD9 AC154806.4-201ENSMUST00000227406 439 ntBASIC4.97□□□□□ -1.61
Lrif1Q8CDD9 AC154436.2-201ENSMUST00000227408 208 ntBASIC4.97□□□□□ -1.61
Lrif1Q8CDD9 AC080021.1-201ENSMUST00000228104 700 ntBASIC4.97□□□□□ -1.61
Lrif1Q8CDD9 Smr3a-201ENSMUST00000031211 635 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
Lrif1Q8CDD9 Olfr664-201ENSMUST00000072887 966 ntAPPRIS P5 BASIC4.97□□□□□ -1.61
Lrif1Q8CDD9 Agps-203ENSMUST00000175646 1839 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
Lrif1Q8CDD9 Gm15737-201ENSMUST00000113434 4894 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Lrif1Q8CDD9 Vmn2r17-201ENSMUST00000171841 2550 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Lrif1Q8CDD9 Brip1-201ENSMUST00000044423 6931 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Lrif1Q8CDD9 Gm4759-201ENSMUST00000183414 6622 ntBASIC4.97□□□□□ -1.61
Lrif1Q8CDD9 Ktn1-219ENSMUST00000190182 3984 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
Lrif1Q8CDD9 Olfr1297-202ENSMUST00000213398 6998 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.61
Lrif1Q8CDD9 Rev3l-207ENSMUST00000164763 10399 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Lrif1Q8CDD9 Vmn1r84-201ENSMUST00000086228 2452 ntAPPRIS P2 BASIC4.96□□□□□ -1.62
Lrif1Q8CDD9 AC102847.2-201ENSMUST00000227799 2906 ntBASIC4.96□□□□□ -1.62
Lrif1Q8CDD9 Defb5-201ENSMUST00000110763 207 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Lrif1Q8CDD9 Mir466i-201ENSMUST00000116924 121 ntBASIC4.96□□□□□ -1.62
Lrif1Q8CDD9 Olfr1146-ps1-201ENSMUST00000117180 943 ntBASIC4.96□□□□□ -1.62
Lrif1Q8CDD9 Gm15803-201ENSMUST00000120118 394 ntBASIC4.96□□□□□ -1.62
Lrif1Q8CDD9 Gm11894-201ENSMUST00000121579 328 ntBASIC4.96□□□□□ -1.62
Lrif1Q8CDD9 Gm23837-201ENSMUST00000122656 286 ntBASIC4.96□□□□□ -1.62
Lrif1Q8CDD9 Gm11197-201ENSMUST00000145158 839 ntBASIC4.96□□□□□ -1.62
Lrif1Q8CDD9 Gm6673-201ENSMUST00000166114 700 ntBASIC4.96□□□□□ -1.62
Lrif1Q8CDD9 Vmn2r-ps10-201ENSMUST00000176836 898 ntBASIC4.96□□□□□ -1.62
Lrif1Q8CDD9 Vmn2r-ps8-201ENSMUST00000177088 898 ntBASIC4.96□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 111.9 ms