Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm15245-201ENSMUST00000129410 1186 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Nup98Q6PFD9 Gm24251-201ENSMUST00000157324 114 ntBASIC5.76□□□□□ -1.49
Nup98Q6PFD9 Gm7976-201ENSMUST00000181507 1242 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Nup98Q6PFD9 Prl8a2-201ENSMUST00000018403 939 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
Nup98Q6PFD9 Gm44402-201ENSMUST00000203677 238 ntBASIC5.76□□□□□ -1.49
Nup98Q6PFD9 Olfr859-201ENSMUST00000086480 930 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Nup98Q6PFD9 Map2-202ENSMUST00000077355 5125 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Nup98Q6PFD9 Slc38a4-201ENSMUST00000023101 3932 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Nup98Q6PFD9 Tmem56-201ENSMUST00000029777 6248 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Nup98Q6PFD9 Vps13c-201ENSMUST00000077879 11527 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Nup98Q6PFD9 Gm43462-201ENSMUST00000200265 3648 ntBASIC5.75□□□□□ -1.49
Nup98Q6PFD9 Lgi1-207ENSMUST00000198518 7780 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Nup98Q6PFD9 AU023762-203ENSMUST00000209897 2179 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Nup98Q6PFD9 Gm39139-202ENSMUST00000212621 5878 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Nup98Q6PFD9 Sspo-206ENSMUST00000212740 15408 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
Nup98Q6PFD9 Htr2a-201ENSMUST00000036653 5606 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Nup98Q6PFD9 Glyat-202ENSMUST00000119960 3296 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Nup98Q6PFD9 Gm37916-201ENSMUST00000192153 2435 ntBASIC5.75□□□□□ -1.49
Nup98Q6PFD9 Gm44250-201ENSMUST00000203092 4229 ntBASIC5.75□□□□□ -1.49
Nup98Q6PFD9 Gm26648-201ENSMUST00000181925 5831 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Nup98Q6PFD9 Gm43920-201ENSMUST00000204953 2159 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Nup98Q6PFD9 Dock7-202ENSMUST00000075836 6704 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
Nup98Q6PFD9 Cnep1r1-202ENSMUST00000117775 728 ntTSL 3 BASIC5.75□□□□□ -1.49
Nup98Q6PFD9 Tcea1-ps1-201ENSMUST00000117942 904 ntBASIC5.75□□□□□ -1.49
Nup98Q6PFD9 Rps15a-ps4-201ENSMUST00000119415 392 ntBASIC5.75□□□□□ -1.49
Nup98Q6PFD9 Olfr343-ps1-201ENSMUST00000121883 303 ntBASIC5.75□□□□□ -1.49
Nup98Q6PFD9 Obox4-ps26-201ENSMUST00000176368 724 ntBASIC5.75□□□□□ -1.49
Nup98Q6PFD9 4930548G14Rik-202ENSMUST00000190364 1185 ntTSL 2 BASIC5.75□□□□□ -1.49
Nup98Q6PFD9 4930405J17Rik-201ENSMUST00000214323 620 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Nup98Q6PFD9 Crem-202ENSMUST00000049942 953 ntTSL 2 BASIC5.75□□□□□ -1.49
Nup98Q6PFD9 Apoo-ps-201ENSMUST00000061241 586 ntBASIC5.75□□□□□ -1.49
Nup98Q6PFD9 Gm45762-201ENSMUST00000212863 2619 ntBASIC5.75□□□□□ -1.49
Nup98Q6PFD9 Olfr922-202ENSMUST00000213164 4028 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Nup98Q6PFD9 Slc7a2-203ENSMUST00000117077 7626 ntAPPRIS ALT1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Nup98Q6PFD9 Gm37254-201ENSMUST00000193542 3901 ntBASIC5.75□□□□□ -1.49
Nup98Q6PFD9 Gramd1c-203ENSMUST00000179565 3159 ntTSL 5 BASIC5.75□□□□□ -1.49
Nup98Q6PFD9 Tlr5-202ENSMUST00000191820 3818 ntAPPRIS ALT2 BASIC5.75□□□□□ -1.49
Nup98Q6PFD9 AC153532.3-201ENSMUST00000218660 3848 ntBASIC5.75□□□□□ -1.49
Nup98Q6PFD9 AC153494.1-201ENSMUST00000218664 3041 ntBASIC5.74□□□□□ -1.49
Nup98Q6PFD9 Tnrc6a-201ENSMUST00000094053 8183 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Nup98Q6PFD9 Gm43490-201ENSMUST00000197593 2652 ntBASIC5.74□□□□□ -1.49
Nup98Q6PFD9 Vmn1r39-201ENSMUST00000226217 2258 ntAPPRIS P2 BASIC5.74□□□□□ -1.49
Nup98Q6PFD9 Vmn1r39-204ENSMUST00000227555 2297 ntAPPRIS P2 BASIC5.74□□□□□ -1.49
Nup98Q6PFD9 Vmn1r39-205ENSMUST00000228008 2283 ntAPPRIS ALT2 BASIC5.74□□□□□ -1.49
Nup98Q6PFD9 Clvs1-202ENSMUST00000108348 3526 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Nup98Q6PFD9 AC151971.5-202ENSMUST00000215946 3188 ntTSL 5 BASIC5.74□□□□□ -1.49
Nup98Q6PFD9 Olfr620-201ENSMUST00000052152 3157 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Nup98Q6PFD9 Gm25595-201ENSMUST00000102273 97 ntBASIC5.74□□□□□ -1.49
Nup98Q6PFD9 Gm14444-201ENSMUST00000109069 919 ntTSL 2 BASIC5.74□□□□□ -1.49
Nup98Q6PFD9 Gm15779-201ENSMUST00000117470 412 ntBASIC5.74□□□□□ -1.49
Nup98Q6PFD9 Gm13808-201ENSMUST00000121353 184 ntBASIC5.74□□□□□ -1.49
Nup98Q6PFD9 Mllt3-207ENSMUST00000148059 422 ntTSL 5 BASIC5.74□□□□□ -1.49
Nup98Q6PFD9 Gm22726-201ENSMUST00000158089 179 ntBASIC5.74□□□□□ -1.49
Nup98Q6PFD9 Gm24944-201ENSMUST00000158330 128 ntBASIC5.74□□□□□ -1.49
Nup98Q6PFD9 Gm28116-201ENSMUST00000189064 387 ntBASIC5.74□□□□□ -1.49
Nup98Q6PFD9 Gm38221-201ENSMUST00000195146 365 ntBASIC5.74□□□□□ -1.49
Nup98Q6PFD9 2210406H18Rik-201ENSMUST00000207806 1108 ntBASIC5.74□□□□□ -1.49
Nup98Q6PFD9 Pglyrp3-201ENSMUST00000047660 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Nup98Q6PFD9 Abi3bp-201ENSMUST00000048471 4687 ntAPPRIS P4 TSL 1 (best) BASIC5.74□□□□□ -1.49
Nup98Q6PFD9 Rpl21-ps4-201ENSMUST00000080237 438 ntBASIC5.74□□□□□ -1.49
Nup98Q6PFD9 BC030870-201ENSMUST00000098713 1507 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Nup98Q6PFD9 Gm43437-201ENSMUST00000198535 3955 ntBASIC5.74□□□□□ -1.49
Nup98Q6PFD9 Vmn1r218-202ENSMUST00000226692 10430 ntAPPRIS P2 BASIC5.74□□□□□ -1.49
Nup98Q6PFD9 Olfr622-202ENSMUST00000213536 2219 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Nup98Q6PFD9 Zscan4-ps3-201ENSMUST00000210559 2277 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Nup98Q6PFD9 Slfn4-203ENSMUST00000215472 1830 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Nup98Q6PFD9 Obox4-ps27-201ENSMUST00000179203 1362 ntBASIC5.74□□□□□ -1.49
Nup98Q6PFD9 Prrc2c-201ENSMUST00000028016 8815 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
Nup98Q6PFD9 Phospho2-206ENSMUST00000180290 3267 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Nup98Q6PFD9 Sugt1-201ENSMUST00000054908 7392 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Nup98Q6PFD9 Gm732-201ENSMUST00000101290 1661 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Nup98Q6PFD9 Vmn1r71-201ENSMUST00000079113 4996 ntAPPRIS P2 BASIC5.74□□□□□ -1.49
Nup98Q6PFD9 Mmp1a-202ENSMUST00000217651 2011 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Nup98Q6PFD9 Mmp1a-201ENSMUST00000034492 2022 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Nup98Q6PFD9 Igkv1-133-201ENSMUST00000103304 374 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Nup98Q6PFD9 Gm23014-201ENSMUST00000104144 130 ntBASIC5.74□□□□□ -1.49
Nup98Q6PFD9 Gm15058-201ENSMUST00000117689 458 ntBASIC5.74□□□□□ -1.49
Nup98Q6PFD9 2210408F21Rik-202ENSMUST00000124811 384 ntTSL 2 BASIC5.74□□□□□ -1.49
Nup98Q6PFD9 Tex50-201ENSMUST00000135643 1192 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
Nup98Q6PFD9 Gm11274-201ENSMUST00000146857 481 ntTSL 2 BASIC5.74□□□□□ -1.49
Nup98Q6PFD9 Snhg1-207ENSMUST00000205909 709 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Nup98Q6PFD9 Gm45007-201ENSMUST00000206237 366 ntBASIC5.74□□□□□ -1.49
Nup98Q6PFD9 Gm19170-201ENSMUST00000212440 1084 ntBASIC5.74□□□□□ -1.49
Nup98Q6PFD9 1700025K04Rik-201ENSMUST00000218075 1174 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Nup98Q6PFD9 AL589696.1-201ENSMUST00000225711 330 ntBASIC5.74□□□□□ -1.49
Nup98Q6PFD9 AC123061.2-201ENSMUST00000226234 802 ntBASIC5.74□□□□□ -1.49
Nup98Q6PFD9 Ear-ps9-202ENSMUST00000226796 245 ntBASIC5.74□□□□□ -1.49
Nup98Q6PFD9 CT573086.3-201ENSMUST00000228762 594 ntBASIC5.74□□□□□ -1.49
Nup98Q6PFD9 Gm43654-201ENSMUST00000200664 3417 ntBASIC5.73□□□□□ -1.49
Nup98Q6PFD9 Slc26a3-201ENSMUST00000001254 2908 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Nup98Q6PFD9 Olfr1383-202ENSMUST00000204706 4168 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
Nup98Q6PFD9 Pcsk2os2-201ENSMUST00000153878 3370 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Nup98Q6PFD9 Mdm4-210ENSMUST00000188090 7105 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
Nup98Q6PFD9 Cyp2c38-201ENSMUST00000035488 2869 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Nup98Q6PFD9 Gm45415-201ENSMUST00000209644 2074 ntBASIC5.73□□□□□ -1.49
Nup98Q6PFD9 Cntnap2-202ENSMUST00000114641 9827 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Nup98Q6PFD9 Trim30a-201ENSMUST00000076922 3771 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Nup98Q6PFD9 Xlr5d-ps-201ENSMUST00000117501 782 ntBASIC5.73□□□□□ -1.49
Nup98Q6PFD9 Olfr1035-ps1-201ENSMUST00000120109 966 ntBASIC5.73□□□□□ -1.49
Nup98Q6PFD9 Gm14408-202ENSMUST00000126726 279 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 85.4 ms