Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Gm20838-202ENSMUST00000187712 931 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Vps54Q5SPW0 Gm28976-201ENSMUST00000188070 144 ntBASIC6.02□□□□□ -1.45
Vps54Q5SPW0 1700040F15Rik-201ENSMUST00000188244 931 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Vps54Q5SPW0 Gm21996-201ENSMUST00000188269 931 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Vps54Q5SPW0 Gm21256-202ENSMUST00000188881 932 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Vps54Q5SPW0 Gm21739-202ENSMUST00000188917 933 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Vps54Q5SPW0 Gm28891-202ENSMUST00000189333 927 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Vps54Q5SPW0 Gm21094-202ENSMUST00000189577 926 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Vps54Q5SPW0 Gm20792-201ENSMUST00000189765 931 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Vps54Q5SPW0 Gm28919-201ENSMUST00000190026 920 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Vps54Q5SPW0 Gm28957-201ENSMUST00000190174 373 ntBASIC6.02□□□□□ -1.45
Vps54Q5SPW0 Gm28769-201ENSMUST00000190176 615 ntBASIC6.02□□□□□ -1.45
Vps54Q5SPW0 Gm28357-201ENSMUST00000190256 622 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Vps54Q5SPW0 Gm28510-201ENSMUST00000190572 928 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Vps54Q5SPW0 Gm21861-202ENSMUST00000190806 931 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Vps54Q5SPW0 Gm20819-201ENSMUST00000191091 925 ntBASIC6.02□□□□□ -1.45
Vps54Q5SPW0 Gm20871-201ENSMUST00000191322 931 ntBASIC6.02□□□□□ -1.45
Vps54Q5SPW0 Gm21865-202ENSMUST00000191443 923 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Vps54Q5SPW0 Gm30737-201ENSMUST00000192683 923 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Vps54Q5SPW0 Gm35134-201ENSMUST00000194086 923 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Vps54Q5SPW0 4930563F08Rik-201ENSMUST00000198640 515 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Vps54Q5SPW0 Gm43136-201ENSMUST00000200403 636 ntBASIC6.02□□□□□ -1.45
Vps54Q5SPW0 Gm42761-201ENSMUST00000201899 738 ntTSL 3 BASIC6.02□□□□□ -1.45
Vps54Q5SPW0 Supt4b-201ENSMUST00000214434 351 ntBASIC6.02□□□□□ -1.45
Vps54Q5SPW0 AC138290.1-201ENSMUST00000219242 820 ntTSL 5 BASIC6.02□□□□□ -1.45
Vps54Q5SPW0 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC6.02□□□□□ -1.45
Vps54Q5SPW0 AC122295.1-201ENSMUST00000223476 388 ntBASIC6.02□□□□□ -1.45
Vps54Q5SPW0 AC165092.2-201ENSMUST00000224681 368 ntBASIC6.02□□□□□ -1.45
Vps54Q5SPW0 Prl7a1-203ENSMUST00000224852 1283 ntBASIC6.02□□□□□ -1.45
Vps54Q5SPW0 AC154283.1-201ENSMUST00000228417 389 ntBASIC6.02□□□□□ -1.45
Vps54Q5SPW0 Prl7a1-201ENSMUST00000006659 940 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
Vps54Q5SPW0 4933403O08Rik-203ENSMUST00000164272 1517 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Vps54Q5SPW0 Orc3-202ENSMUST00000108142 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Vps54Q5SPW0 CT025710.1-201ENSMUST00000222949 2533 ntBASIC6.02□□□□□ -1.45
Vps54Q5SPW0 Samd3-202ENSMUST00000164660 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Vps54Q5SPW0 Samd3-203ENSMUST00000218301 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Vps54Q5SPW0 Pramel5-201ENSMUST00000035757 2147 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Vps54Q5SPW0 Nlrp4a-204ENSMUST00000146907 3479 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Vps54Q5SPW0 4930444F02Rik-201ENSMUST00000215429 6871 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Vps54Q5SPW0 Ttc37-205ENSMUST00000224386 6976 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Vps54Q5SPW0 Dlg1-204ENSMUST00000115196 3418 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Vps54Q5SPW0 Zscan4c-201ENSMUST00000131379 2276 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Vps54Q5SPW0 Slc19a3-201ENSMUST00000045560 2974 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Vps54Q5SPW0 Vmn2r1-201ENSMUST00000029406 2739 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Vps54Q5SPW0 Gm14988-201ENSMUST00000117224 1548 ntBASIC6.01□□□□□ -1.45
Vps54Q5SPW0 Gm26764-201ENSMUST00000181175 2596 ntTSL 5 BASIC6.01□□□□□ -1.45
Vps54Q5SPW0 Gm11822-201ENSMUST00000119177 415 ntBASIC6.01□□□□□ -1.45
Vps54Q5SPW0 Gm15034-201ENSMUST00000120043 349 ntBASIC6.01□□□□□ -1.45
Vps54Q5SPW0 Gm11381-201ENSMUST00000138574 420 ntTSL 5 BASIC6.01□□□□□ -1.45
Vps54Q5SPW0 Skint1-204ENSMUST00000162158 1260 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Vps54Q5SPW0 Gng2-206ENSMUST00000162425 393 ntAPPRIS P1 TSL 3 BASIC6.01□□□□□ -1.45
Vps54Q5SPW0 Gm17086-201ENSMUST00000171346 484 ntBASIC6.01□□□□□ -1.45
Vps54Q5SPW0 Gm9457-201ENSMUST00000180176 372 ntBASIC6.01□□□□□ -1.45
Vps54Q5SPW0 Gm26731-201ENSMUST00000180683 543 ntBASIC6.01□□□□□ -1.45
Vps54Q5SPW0 Mir7006-201ENSMUST00000183624 69 ntBASIC6.01□□□□□ -1.45
Vps54Q5SPW0 9130024F11Rik-203ENSMUST00000187858 447 ntTSL 2 BASIC6.01□□□□□ -1.45
Vps54Q5SPW0 2810429I04Rik-209ENSMUST00000188642 674 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Vps54Q5SPW0 Gm38163-201ENSMUST00000194112 482 ntTSL 5 BASIC6.01□□□□□ -1.45
Vps54Q5SPW0 Tmem243-203ENSMUST00000198935 849 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Vps54Q5SPW0 Olfr663-201ENSMUST00000209914 959 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Vps54Q5SPW0 Gm19936-201ENSMUST00000216414 838 ntBASIC6.01□□□□□ -1.45
Vps54Q5SPW0 AC153532.3-201ENSMUST00000218660 3848 ntBASIC6.01□□□□□ -1.45
Vps54Q5SPW0 4930407I19Rik-201ENSMUST00000220265 923 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Vps54Q5SPW0 V1ra8-201ENSMUST00000078371 890 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Vps54Q5SPW0 Gm22005-201ENSMUST00000082795 141 ntBASIC6.01□□□□□ -1.45
Vps54Q5SPW0 Vav3-202ENSMUST00000106576 3123 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Vps54Q5SPW0 Clec2g-203ENSMUST00000142388 2404 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Vps54Q5SPW0 Gm42968-201ENSMUST00000198578 1372 ntBASIC6.01□□□□□ -1.45
Vps54Q5SPW0 Olfr919-203ENSMUST00000217508 1843 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
Vps54Q5SPW0 Gm28488-203ENSMUST00000188792 1498 ntTSL 5 BASIC6.01□□□□□ -1.45
Vps54Q5SPW0 Gm37060-201ENSMUST00000194997 2397 ntBASIC6.01□□□□□ -1.45
Vps54Q5SPW0 Npat-201ENSMUST00000035850 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Vps54Q5SPW0 Rtl9-201ENSMUST00000165829 4104 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Vps54Q5SPW0 Ube2v2-203ENSMUST00000115777 4207 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Vps54Q5SPW0 Cyp2c38-201ENSMUST00000035488 2869 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Vps54Q5SPW0 Gm6853-202ENSMUST00000211360 4375 ntTSL 5 BASIC6□□□□□ -1.45
Vps54Q5SPW0 Dgkk-201ENSMUST00000067410 7155 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Vps54Q5SPW0 Postn-204ENSMUST00000117373 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Vps54Q5SPW0 Dctn4-201ENSMUST00000025505 3738 ntAPPRIS P2 TSL 1 (best) BASIC6□□□□□ -1.45
Vps54Q5SPW0 Gm13172-201ENSMUST00000118685 256 ntBASIC6□□□□□ -1.45
Vps54Q5SPW0 Gm16463-201ENSMUST00000120527 721 ntBASIC6□□□□□ -1.45
Vps54Q5SPW0 Vmn1r-ps107-201ENSMUST00000121458 581 ntBASIC6□□□□□ -1.45
Vps54Q5SPW0 Trim30e-ps1-202ENSMUST00000151294 731 ntBASIC6□□□□□ -1.45
Vps54Q5SPW0 Gm22529-201ENSMUST00000158817 123 ntBASIC6□□□□□ -1.45
Vps54Q5SPW0 Gm8214-201ENSMUST00000172123 351 ntBASIC6□□□□□ -1.45
Vps54Q5SPW0 Vmn1r-ps67-201ENSMUST00000173843 691 ntBASIC6□□□□□ -1.45
Vps54Q5SPW0 Vmn2r-ps121-201ENSMUST00000176230 802 ntBASIC6□□□□□ -1.45
Vps54Q5SPW0 1700031M16Rik-204ENSMUST00000189724 824 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Vps54Q5SPW0 Gm28567-201ENSMUST00000190270 693 ntBASIC6□□□□□ -1.45
Vps54Q5SPW0 1700031M16Rik-207ENSMUST00000191513 847 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Vps54Q5SPW0 Gm37044-201ENSMUST00000193531 693 ntBASIC6□□□□□ -1.45
Vps54Q5SPW0 Gm37629-201ENSMUST00000193635 1050 ntBASIC6□□□□□ -1.45
Vps54Q5SPW0 Gm20056-201ENSMUST00000194813 519 ntBASIC6□□□□□ -1.45
Vps54Q5SPW0 Gm38369-201ENSMUST00000195101 693 ntBASIC6□□□□□ -1.45
Vps54Q5SPW0 Trav3-2-201ENSMUST00000198999 305 ntBASIC6□□□□□ -1.45
Vps54Q5SPW0 Gm43418-201ENSMUST00000201334 428 ntBASIC6□□□□□ -1.45
Vps54Q5SPW0 Gm3279-201ENSMUST00000203099 1092 ntTSL 1 (best) BASIC6□□□□□ -1.45
Vps54Q5SPW0 Gm8189-203ENSMUST00000211159 1225 ntBASIC6□□□□□ -1.45
Vps54Q5SPW0 Gm6906-201ENSMUST00000218014 569 ntBASIC6□□□□□ -1.45
Vps54Q5SPW0 Gm18510-201ENSMUST00000219335 1096 ntBASIC6□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms