Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Fbln5-203ENSMUST00000222587 2371 ntTSL 5 BASIC5.33□□□□□ -1.56
Col8a1Q00780 Ros1-202ENSMUST00000218452 6960 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
Col8a1Q00780 Defb47-201ENSMUST00000100492 359 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Col8a1Q00780 Ear-ps2-201ENSMUST00000100689 466 ntBASIC5.33□□□□□ -1.56
Col8a1Q00780 Pifo-201ENSMUST00000010280 956 ntAPPRIS P4 TSL 1 (best) BASIC5.33□□□□□ -1.56
Col8a1Q00780 Trbv19-201ENSMUST00000103276 566 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Col8a1Q00780 Gm8279-201ENSMUST00000112767 998 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
Col8a1Q00780 Gm14197-201ENSMUST00000117480 1049 ntBASIC5.33□□□□□ -1.56
Col8a1Q00780 Gm12442-201ENSMUST00000118372 338 ntBASIC5.33□□□□□ -1.56
Col8a1Q00780 Gm13473-201ENSMUST00000119289 367 ntBASIC5.33□□□□□ -1.56
Col8a1Q00780 Gm13533-201ENSMUST00000121104 177 ntBASIC5.33□□□□□ -1.56
Col8a1Q00780 Gm13808-201ENSMUST00000121353 184 ntBASIC5.33□□□□□ -1.56
Col8a1Q00780 Gm15111-201ENSMUST00000122142 878 ntBASIC5.33□□□□□ -1.56
Col8a1Q00780 Gm22106-201ENSMUST00000122544 127 ntBASIC5.33□□□□□ -1.56
Col8a1Q00780 Gm15860-202ENSMUST00000137257 506 ntTSL 3 BASIC5.33□□□□□ -1.56
Col8a1Q00780 Gm15534-201ENSMUST00000137642 562 ntBASIC5.33□□□□□ -1.56
Col8a1Q00780 Zfp965-204ENSMUST00000143490 297 ntTSL 5 BASIC5.33□□□□□ -1.56
Col8a1Q00780 Gm16333-201ENSMUST00000161416 318 ntTSL 3 BASIC5.33□□□□□ -1.56
Col8a1Q00780 Gm7316-201ENSMUST00000165395 445 ntBASIC5.33□□□□□ -1.56
Col8a1Q00780 Gm27599-201ENSMUST00000183758 174 ntBASIC5.33□□□□□ -1.56
Col8a1Q00780 Gm37068-201ENSMUST00000195168 640 ntTSL 3 BASIC5.33□□□□□ -1.56
Col8a1Q00780 Gm31693-201ENSMUST00000200150 909 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Col8a1Q00780 Iglc3-201ENSMUST00000200235 452 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Col8a1Q00780 Gm42799-201ENSMUST00000201331 328 ntBASIC5.33□□□□□ -1.56
Col8a1Q00780 Gm19060-201ENSMUST00000201959 421 ntBASIC5.33□□□□□ -1.56
Col8a1Q00780 Gm43688-201ENSMUST00000202249 310 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Col8a1Q00780 Gm17906-201ENSMUST00000202480 901 ntBASIC5.33□□□□□ -1.56
Col8a1Q00780 Cyp2b27-ps-201ENSMUST00000205582 1279 ntBASIC5.33□□□□□ -1.56
Col8a1Q00780 Olfr581-ps1-201ENSMUST00000209214 556 ntBASIC5.33□□□□□ -1.56
Col8a1Q00780 AC132121.1-201ENSMUST00000220774 332 ntBASIC5.33□□□□□ -1.56
Col8a1Q00780 CT030184.2-201ENSMUST00000223064 263 ntBASIC5.33□□□□□ -1.56
Col8a1Q00780 AC154657.1-201ENSMUST00000226394 775 ntBASIC5.33□□□□□ -1.56
Col8a1Q00780 AC140209.1-204ENSMUST00000226736 739 ntBASIC5.33□□□□□ -1.56
Col8a1Q00780 AC102291.1-201ENSMUST00000227164 529 ntBASIC5.33□□□□□ -1.56
Col8a1Q00780 CT025548.1-201ENSMUST00000227459 257 ntBASIC5.33□□□□□ -1.56
Col8a1Q00780 AC116591.1-201ENSMUST00000227919 351 ntBASIC5.33□□□□□ -1.56
Col8a1Q00780 Olfr629-201ENSMUST00000051346 1122 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Col8a1Q00780 Cryba1-201ENSMUST00000078623 778 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Col8a1Q00780 Mir27a-201ENSMUST00000083510 87 ntBASIC5.33□□□□□ -1.56
Col8a1Q00780 Mir143-201ENSMUST00000083511 63 ntBASIC5.33□□□□□ -1.56
Col8a1Q00780 Olfr994-201ENSMUST00000099925 945 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Col8a1Q00780 Gk-208ENSMUST00000156390 4245 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
Col8a1Q00780 Zfp934-209ENSMUST00000222746 2206 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Col8a1Q00780 Kcnj16-205ENSMUST00000178798 3678 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
Col8a1Q00780 Gm19368-201ENSMUST00000221258 4424 ntBASIC5.33□□□□□ -1.56
Col8a1Q00780 Gm44275-201ENSMUST00000203442 2519 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Col8a1Q00780 Gm16523-202ENSMUST00000203640 4750 ntBASIC5.33□□□□□ -1.56
Col8a1Q00780 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Col8a1Q00780 Ect2l-201ENSMUST00000095817 2900 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
Col8a1Q00780 A530053G22Rik-201ENSMUST00000060147 1526 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Col8a1Q00780 Gm37541-201ENSMUST00000192464 2315 ntBASIC5.32□□□□□ -1.56
Col8a1Q00780 Klkb1-201ENSMUST00000026907 5249 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Col8a1Q00780 Gm18310-201ENSMUST00000206494 3912 ntBASIC5.32□□□□□ -1.56
Col8a1Q00780 Tmprss11a-201ENSMUST00000101073 2657 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Col8a1Q00780 Asxl3-201ENSMUST00000097655 11697 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Col8a1Q00780 Crisp2-201ENSMUST00000024724 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Col8a1Q00780 Olfr958-203ENSMUST00000217227 3831 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Col8a1Q00780 Gm43719-201ENSMUST00000200088 2199 ntBASIC5.32□□□□□ -1.56
Col8a1Q00780 Gm46348-201ENSMUST00000222917 2151 ntTSL 5 BASIC5.32□□□□□ -1.56
Col8a1Q00780 Emcn-201ENSMUST00000119475 1357 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
Col8a1Q00780 Gm7269-201ENSMUST00000210819 1373 ntBASIC5.32□□□□□ -1.56
Col8a1Q00780 Robo2-203ENSMUST00000117785 8124 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Col8a1Q00780 Cyb5r2-201ENSMUST00000052438 2772 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
Col8a1Q00780 Gm26384-201ENSMUST00000102183 110 ntBASIC5.32□□□□□ -1.56
Col8a1Q00780 Gm22591-201ENSMUST00000104243 106 ntBASIC5.32□□□□□ -1.56
Col8a1Q00780 Gm25345-201ENSMUST00000104505 133 ntBASIC5.32□□□□□ -1.56
Col8a1Q00780 Mir466f-4-201ENSMUST00000116930 121 ntBASIC5.32□□□□□ -1.56
Col8a1Q00780 Olfr587-ps1-201ENSMUST00000118378 948 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Col8a1Q00780 Gm15332-201ENSMUST00000118386 357 ntBASIC5.32□□□□□ -1.56
Col8a1Q00780 Gm14870-201ENSMUST00000118414 156 ntBASIC5.32□□□□□ -1.56
Col8a1Q00780 Gm11987-201ENSMUST00000118524 381 ntBASIC5.32□□□□□ -1.56
Col8a1Q00780 Gm14520-201ENSMUST00000119258 387 ntBASIC5.32□□□□□ -1.56
Col8a1Q00780 Gm12482-201ENSMUST00000120435 630 ntBASIC5.32□□□□□ -1.56
Col8a1Q00780 Atp5l-ps2-201ENSMUST00000121382 314 ntBASIC5.32□□□□□ -1.56
Col8a1Q00780 Gm12332-201ENSMUST00000121397 922 ntBASIC5.32□□□□□ -1.56
Col8a1Q00780 Gm16126-201ENSMUST00000126025 589 ntTSL 3 BASIC5.32□□□□□ -1.56
Col8a1Q00780 Grip1os1-202ENSMUST00000135940 1192 ntTSL 5 BASIC5.32□□□□□ -1.56
Col8a1Q00780 Tmem216-206ENSMUST00000154383 927 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
Col8a1Q00780 Gm22491-201ENSMUST00000157190 102 ntBASIC5.32□□□□□ -1.56
Col8a1Q00780 Gm23591-201ENSMUST00000157663 286 ntBASIC5.32□□□□□ -1.56
Col8a1Q00780 D830030K20Rik-202ENSMUST00000178670 441 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Col8a1Q00780 Gm4076-201ENSMUST00000179230 965 ntBASIC5.32□□□□□ -1.56
Col8a1Q00780 Ifi213-205ENSMUST00000180215 643 ntAPPRIS P2 TSL 3 BASIC5.32□□□□□ -1.56
Col8a1Q00780 4933416M07Rik-201ENSMUST00000181424 624 ntTSL 5 BASIC5.32□□□□□ -1.56
Col8a1Q00780 Mir6341-201ENSMUST00000183490 121 ntBASIC5.32□□□□□ -1.56
Col8a1Q00780 Ktn1-202ENSMUST00000185343 3846 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
Col8a1Q00780 Gm28560-201ENSMUST00000186091 315 ntBASIC5.32□□□□□ -1.56
Col8a1Q00780 Ms4a12-201ENSMUST00000186228 792 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Col8a1Q00780 Ktn1-205ENSMUST00000186627 3840 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
Col8a1Q00780 Gm28334-201ENSMUST00000186653 315 ntBASIC5.32□□□□□ -1.56
Col8a1Q00780 Ktn1-213ENSMUST00000188330 3819 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
Col8a1Q00780 Gm28495-201ENSMUST00000188452 315 ntBASIC5.32□□□□□ -1.56
Col8a1Q00780 Gm28232-201ENSMUST00000188683 315 ntBASIC5.32□□□□□ -1.56
Col8a1Q00780 Gm28481-201ENSMUST00000189231 315 ntBASIC5.32□□□□□ -1.56
Col8a1Q00780 Vmn1r82-202ENSMUST00000191002 918 ntBASIC5.32□□□□□ -1.56
Col8a1Q00780 Gm29059-201ENSMUST00000191534 315 ntBASIC5.32□□□□□ -1.56
Col8a1Q00780 Gm37765-201ENSMUST00000192395 315 ntBASIC5.32□□□□□ -1.56
Col8a1Q00780 Gm37237-201ENSMUST00000192893 315 ntBASIC5.32□□□□□ -1.56
Col8a1Q00780 Gm36968-201ENSMUST00000193737 315 ntBASIC5.32□□□□□ -1.56
Col8a1Q00780 Gm38290-201ENSMUST00000195238 315 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 83.9 ms