Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Ap3s2-201ENSMUST00000075657 5813 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PrkdcP97313 Slc22a8-202ENSMUST00000170817 3398 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
PrkdcP97313 Gcnt2-203ENSMUST00000110191 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
PrkdcP97313 Kcnj15-202ENSMUST00000113854 4409 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PrkdcP97313 Gm45574-201ENSMUST00000210921 331 ntBASIC3.31□□□□□ -1.88
PrkdcP97313 Mrgprb1-201ENSMUST00000094384 4185 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PrkdcP97313 Sptbn1-201ENSMUST00000006629 8461 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
PrkdcP97313 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
PrkdcP97313 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC3.31□□□□□ -1.88
PrkdcP97313 Olfr1264-202ENSMUST00000216616 4311 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
PrkdcP97313 Zfp871-201ENSMUST00000057501 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
PrkdcP97313 Aldh1l2-201ENSMUST00000020497 6027 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PrkdcP97313 Lcorl-204ENSMUST00000087164 4979 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PrkdcP97313 Gm43469-201ENSMUST00000196084 4634 ntBASIC3.31□□□□□ -1.88
PrkdcP97313 Arl5b-201ENSMUST00000017562 6933 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PrkdcP97313 Gm43376-202ENSMUST00000199747 1743 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PrkdcP97313 Ifi205-201ENSMUST00000059226 1613 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PrkdcP97313 Nr1h5-201ENSMUST00000058899 2835 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
PrkdcP97313 Gm6754-201ENSMUST00000117124 913 ntBASIC3.31□□□□□ -1.88
PrkdcP97313 Gm22343-201ENSMUST00000122648 286 ntBASIC3.31□□□□□ -1.88
PrkdcP97313 Gm24735-201ENSMUST00000158859 118 ntBASIC3.31□□□□□ -1.88
PrkdcP97313 Gm3077-201ENSMUST00000165903 627 ntBASIC3.31□□□□□ -1.88
PrkdcP97313 Vmn1r23-201ENSMUST00000175817 997 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
PrkdcP97313 Gm27940-201ENSMUST00000184449 98 ntBASIC3.31□□□□□ -1.88
PrkdcP97313 Gm37830-201ENSMUST00000195282 837 ntTSL 5 BASIC3.31□□□□□ -1.88
PrkdcP97313 Gm8023-201ENSMUST00000195298 903 ntBASIC3.31□□□□□ -1.88
PrkdcP97313 Olfr964-ps1-201ENSMUST00000217577 914 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
PrkdcP97313 AC124420.1-201ENSMUST00000219779 791 ntBASIC3.31□□□□□ -1.88
PrkdcP97313 Gm11360-201ENSMUST00000221898 262 ntBASIC3.31□□□□□ -1.88
PrkdcP97313 Vmn1r90-209ENSMUST00000227855 7362 ntAPPRIS P2 BASIC3.31□□□□□ -1.88
PrkdcP97313 Gm37079-201ENSMUST00000194114 2135 ntBASIC3.31□□□□□ -1.88
PrkdcP97313 Olfr701-203ENSMUST00000217739 4100 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PrkdcP97313 AC129208.1-201ENSMUST00000227474 2906 ntBASIC3.31□□□□□ -1.88
PrkdcP97313 Gm37137-201ENSMUST00000195138 2684 ntBASIC3.31□□□□□ -1.88
PrkdcP97313 Olfr1043-202ENSMUST00000213886 1675 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
PrkdcP97313 Fap-208ENSMUST00000174234 2211 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
PrkdcP97313 Smg7-201ENSMUST00000043560 5792 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
PrkdcP97313 Ttf1-201ENSMUST00000100237 4160 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
PrkdcP97313 Erc2-205ENSMUST00000210135 6233 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
PrkdcP97313 Gm29730-201ENSMUST00000192986 1396 ntBASIC3.3□□□□□ -1.88
PrkdcP97313 Olfr243-202ENSMUST00000215723 4735 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
PrkdcP97313 Trav5-1-201ENSMUST00000103570 343 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
PrkdcP97313 Gm15988-201ENSMUST00000118677 367 ntBASIC3.3□□□□□ -1.88
PrkdcP97313 Gm23959-201ENSMUST00000157208 324 ntBASIC3.3□□□□□ -1.88
PrkdcP97313 Vmn1r113-201ENSMUST00000168794 894 ntTSL 5 BASIC3.3□□□□□ -1.88
PrkdcP97313 Gm22120-201ENSMUST00000175590 70 ntBASIC3.3□□□□□ -1.88
PrkdcP97313 Mir7578-201ENSMUST00000183455 82 ntBASIC3.3□□□□□ -1.88
PrkdcP97313 Trbv9-201ENSMUST00000194494 290 ntBASIC3.3□□□□□ -1.88
PrkdcP97313 4930458B22Rik-201ENSMUST00000209339 754 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
PrkdcP97313 AC156832.3-201ENSMUST00000215591 435 ntBASIC3.3□□□□□ -1.88
PrkdcP97313 Cntn6-201ENSMUST00000089215 3702 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PrkdcP97313 Fbxw26-201ENSMUST00000071917 1824 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PrkdcP97313 Olfr769-202ENSMUST00000215453 4143 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
PrkdcP97313 Gm9077-201ENSMUST00000210657 2298 ntBASIC3.3□□□□□ -1.88
PrkdcP97313 Naip2-203ENSMUST00000167986 4356 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
PrkdcP97313 Trrap-201ENSMUST00000038980 12344 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
PrkdcP97313 Trpm3-206ENSMUST00000099569 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
PrkdcP97313 Enpp2-204ENSMUST00000173516 2887 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
PrkdcP97313 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
PrkdcP97313 Zfp101-204ENSMUST00000174512 3743 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
PrkdcP97313 Cenpi-201ENSMUST00000081064 3227 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PrkdcP97313 Col25a1-202ENSMUST00000106353 6701 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
PrkdcP97313 AC121094.1-201ENSMUST00000224766 1345 ntBASIC3.3□□□□□ -1.88
PrkdcP97313 Gm43611-201ENSMUST00000196656 4352 ntBASIC3.3□□□□□ -1.88
PrkdcP97313 B4galt4-203ENSMUST00000114710 837 ntTSL 3 BASIC3.3□□□□□ -1.88
PrkdcP97313 Gm15076-201ENSMUST00000117076 474 ntBASIC3.3□□□□□ -1.88
PrkdcP97313 Gm11598-201ENSMUST00000119257 357 ntBASIC3.3□□□□□ -1.88
PrkdcP97313 Skint1-205ENSMUST00000162885 603 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
PrkdcP97313 Vmn1r57-201ENSMUST00000170780 933 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
PrkdcP97313 Gm27781-201ENSMUST00000185185 92 ntBASIC3.3□□□□□ -1.88
PrkdcP97313 Gm38150-201ENSMUST00000192996 452 ntBASIC3.3□□□□□ -1.88
PrkdcP97313 Ccl12-201ENSMUST00000000194 537 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PrkdcP97313 Gm43735-201ENSMUST00000198245 809 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
PrkdcP97313 Gm19243-201ENSMUST00000198592 269 ntBASIC3.3□□□□□ -1.88
PrkdcP97313 Olfr39-201ENSMUST00000071725 1098 ntTSL 2 BASIC3.3□□□□□ -1.88
PrkdcP97313 Vmn1r51-205ENSMUST00000227109 4214 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
PrkdcP97313 Focad-208ENSMUST00000159342 5456 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
PrkdcP97313 B830042I05Rik-201ENSMUST00000208333 1620 ntTSL 5 BASIC3.3□□□□□ -1.88
PrkdcP97313 Pcdh11x-202ENSMUST00000113358 8607 ntAPPRIS P2 TSL 5 BASIC3.3□□□□□ -1.88
PrkdcP97313 Pof1b-201ENSMUST00000039887 3886 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PrkdcP97313 Epg5-201ENSMUST00000044622 9672 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
PrkdcP97313 Trim6-201ENSMUST00000098180 3827 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PrkdcP97313 Myom1-202ENSMUST00000073211 5602 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
PrkdcP97313 Grin2a-206ENSMUST00000199708 14634 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
PrkdcP97313 Gm2381-201ENSMUST00000174558 4073 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PrkdcP97313 Ctnnd1-203ENSMUST00000067232 6119 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
PrkdcP97313 AC102431.1-201ENSMUST00000223773 1449 ntBASIC3.3□□□□□ -1.88
PrkdcP97313 Nav1-201ENSMUST00000040599 12767 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
PrkdcP97313 Ahcyl2-203ENSMUST00000115238 5129 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PrkdcP97313 Fam122c-201ENSMUST00000114835 745 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PrkdcP97313 Sva-202ENSMUST00000117406 645 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
PrkdcP97313 Gm11406-201ENSMUST00000117418 484 ntBASIC3.3□□□□□ -1.88
PrkdcP97313 Nell1os-203ENSMUST00000152166 410 ntTSL 2 BASIC3.3□□□□□ -1.88
PrkdcP97313 Gm17133-201ENSMUST00000170636 289 ntTSL 3 BASIC3.3□□□□□ -1.88
PrkdcP97313 Gm44003-201ENSMUST00000203024 490 ntBASIC3.3□□□□□ -1.88
PrkdcP97313 Gm31717-201ENSMUST00000213044 668 ntTSL 5 BASIC3.3□□□□□ -1.88
PrkdcP97313 AC122448.1-201ENSMUST00000226317 772 ntBASIC3.3□□□□□ -1.88
PrkdcP97313 Gm10042-201ENSMUST00000079884 78 ntBASIC3.3□□□□□ -1.88
PrkdcP97313 Olfr1490-201ENSMUST00000080162 951 ntAPPRIS P2 BASIC3.3□□□□□ -1.88
PrkdcP97313 Gm29112-201ENSMUST00000188962 3487 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms