Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Gm7073-203ENSMUST00000190178 1419 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Msh6P54276 Vmn2r104-201ENSMUST00000168050 2583 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Msh6P54276 Mmp1a-201ENSMUST00000034492 2022 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Msh6P54276 Pcdh15-222ENSMUST00000147189 6806 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
Msh6P54276 Rgs17-204ENSMUST00000131996 8107 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Msh6P54276 Neb-201ENSMUST00000028320 10298 ntTSL 5 BASIC6.4□□□□□ -1.38
Msh6P54276 Gm3127-202ENSMUST00000171866 1758 ntAPPRIS P5 TSL 5 BASIC6.4□□□□□ -1.38
Msh6P54276 Gm19131-202ENSMUST00000203464 3208 ntBASIC6.4□□□□□ -1.38
Msh6P54276 Xpo7-202ENSMUST00000167242 15121 ntAPPRIS ALT1 TSL 5 BASIC6.4□□□□□ -1.38
Msh6P54276 Amy1-201ENSMUST00000067980 1985 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Msh6P54276 Kif20b-203ENSMUST00000223907 5423 ntAPPRIS ALT2 BASIC6.4□□□□□ -1.39
Msh6P54276 Trappc1-203ENSMUST00000102602 751 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.39
Msh6P54276 Gm12520-201ENSMUST00000117493 316 ntBASIC6.4□□□□□ -1.39
Msh6P54276 Gm11196-201ENSMUST00000119052 395 ntBASIC6.4□□□□□ -1.39
Msh6P54276 Gm12807-201ENSMUST00000121546 962 ntBASIC6.4□□□□□ -1.39
Msh6P54276 Gm16250-201ENSMUST00000148974 256 ntBASIC6.4□□□□□ -1.39
Msh6P54276 Gm29664-201ENSMUST00000191125 463 ntBASIC6.4□□□□□ -1.39
Msh6P54276 Gm6366-201ENSMUST00000198766 826 ntBASIC6.4□□□□□ -1.39
Msh6P54276 Gm43136-201ENSMUST00000200403 636 ntBASIC6.4□□□□□ -1.39
Msh6P54276 Gm45236-201ENSMUST00000208632 229 ntBASIC6.4□□□□□ -1.39
Msh6P54276 4930567H12Rik-202ENSMUST00000212512 766 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Msh6P54276 Gm39348-202ENSMUST00000217239 375 ntTSL 2 BASIC6.4□□□□□ -1.39
Msh6P54276 Gm8942-201ENSMUST00000217892 400 ntBASIC6.4□□□□□ -1.39
Msh6P54276 CT030242.3-201ENSMUST00000221231 581 ntBASIC6.4□□□□□ -1.39
Msh6P54276 Gm37890-201ENSMUST00000195610 3992 ntBASIC6.4□□□□□ -1.39
Msh6P54276 AC122355.1-201ENSMUST00000228155 4184 ntBASIC6.4□□□□□ -1.39
Msh6P54276 Gm35256-201ENSMUST00000212780 3269 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Msh6P54276 Gm43784-201ENSMUST00000202922 2436 ntBASIC6.4□□□□□ -1.39
Msh6P54276 Vmn2r-ps128-201ENSMUST00000176367 2570 ntBASIC6.4□□□□□ -1.39
Msh6P54276 Pof1b-201ENSMUST00000039887 3886 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Msh6P54276 Spef2-201ENSMUST00000041840 4247 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Msh6P54276 Gm37606-201ENSMUST00000191816 3116 ntBASIC6.39□□□□□ -1.39
Msh6P54276 Gm10723-201ENSMUST00000195366 6918 ntBASIC6.39□□□□□ -1.39
Msh6P54276 Hspa9-ps1-201ENSMUST00000119602 1933 ntBASIC6.39□□□□□ -1.39
Msh6P54276 Uty-204ENSMUST00000139365 4684 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Msh6P54276 Gm42598-201ENSMUST00000200110 2437 ntBASIC6.39□□□□□ -1.39
Msh6P54276 Gm3896-201ENSMUST00000176020 4094 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Msh6P54276 Gm19950-204ENSMUST00000208167 4196 ntTSL 5 BASIC6.39□□□□□ -1.39
Msh6P54276 9330159M07Rik-201ENSMUST00000180712 2702 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Msh6P54276 Ccdc186-201ENSMUST00000076085 2754 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Msh6P54276 Cnot4-207ENSMUST00000202417 3296 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Msh6P54276 Lingo2-210ENSMUST00000164772 3562 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Msh6P54276 Capn6-201ENSMUST00000087316 3561 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Msh6P54276 9830107B12Rik-201ENSMUST00000063481 3639 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Msh6P54276 Gm3020-201ENSMUST00000112801 450 ntTSL 5 BASIC6.39□□□□□ -1.39
Msh6P54276 Gm13745-201ENSMUST00000121994 527 ntBASIC6.39□□□□□ -1.39
Msh6P54276 Gm13274-202ENSMUST00000137624 271 ntTSL 3 BASIC6.39□□□□□ -1.39
Msh6P54276 Gm15591-201ENSMUST00000138539 627 ntTSL 5 BASIC6.39□□□□□ -1.39
Msh6P54276 Gm23906-201ENSMUST00000157573 128 ntBASIC6.39□□□□□ -1.39
Msh6P54276 Il19-203ENSMUST00000187410 1135 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Msh6P54276 Gm37670-201ENSMUST00000193622 229 ntBASIC6.39□□□□□ -1.39
Msh6P54276 Gm33050-201ENSMUST00000198132 501 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Msh6P54276 Gm8189-203ENSMUST00000211159 1225 ntBASIC6.39□□□□□ -1.39
Msh6P54276 AC158523.2-201ENSMUST00000222708 548 ntBASIC6.39□□□□□ -1.39
Msh6P54276 CT025689.2-201ENSMUST00000224979 429 ntBASIC6.39□□□□□ -1.39
Msh6P54276 Nsa2-203ENSMUST00000225410 974 ntBASIC6.39□□□□□ -1.39
Msh6P54276 AC154527.3-201ENSMUST00000225519 989 ntBASIC6.39□□□□□ -1.39
Msh6P54276 Mir346-201ENSMUST00000083547 98 ntBASIC6.39□□□□□ -1.39
Msh6P54276 Fam24a-201ENSMUST00000084505 371 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Msh6P54276 Gm38368-201ENSMUST00000193181 1335 ntBASIC6.39□□□□□ -1.39
Msh6P54276 Zfp808-204ENSMUST00000221772 1379 ntTSL 5 BASIC6.39□□□□□ -1.39
Msh6P54276 Gm42702-201ENSMUST00000199515 4217 ntBASIC6.39□□□□□ -1.39
Msh6P54276 Dennd4c-204ENSMUST00000142837 5870 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Msh6P54276 Scn1a-204ENSMUST00000112371 8287 ntAPPRIS ALT1 TSL 5 BASIC6.39□□□□□ -1.39
Msh6P54276 Fam83b-201ENSMUST00000098546 3136 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Msh6P54276 Vmn1r5-202ENSMUST00000226130 3393 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Msh6P54276 Gm19514-201ENSMUST00000206856 4489 ntBASIC6.38□□□□□ -1.39
Msh6P54276 Olfr1087-202ENSMUST00000214141 3861 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Msh6P54276 Gm29666-201ENSMUST00000189185 8038 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Msh6P54276 Epyc-202ENSMUST00000105285 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Msh6P54276 Olfr1444-202ENSMUST00000213606 1872 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Msh6P54276 Gm37767-201ENSMUST00000193239 1834 ntBASIC6.38□□□□□ -1.39
Msh6P54276 Mysm1-201ENSMUST00000075872 7420 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Msh6P54276 Trp53bp1-202ENSMUST00000110648 9621 ntAPPRIS P3 TSL 5 BASIC6.38□□□□□ -1.39
Msh6P54276 Odam-202ENSMUST00000129757 1370 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Msh6P54276 Gm14563-201ENSMUST00000120571 354 ntBASIC6.38□□□□□ -1.39
Msh6P54276 Gm13000-201ENSMUST00000120937 496 ntBASIC6.38□□□□□ -1.39
Msh6P54276 Gm6647-201ENSMUST00000170514 641 ntBASIC6.38□□□□□ -1.39
Msh6P54276 Cox6b2-202ENSMUST00000182048 465 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Msh6P54276 Gm27611-201ENSMUST00000184690 108 ntBASIC6.38□□□□□ -1.39
Msh6P54276 Mrgprc4-ps-201ENSMUST00000186018 964 ntBASIC6.38□□□□□ -1.39
Msh6P54276 Gm38163-201ENSMUST00000194112 482 ntTSL 5 BASIC6.38□□□□□ -1.39
Msh6P54276 Gm43700-201ENSMUST00000200967 316 ntTSL 5 BASIC6.38□□□□□ -1.39
Msh6P54276 Gm44237-201ENSMUST00000205183 936 ntBASIC6.38□□□□□ -1.39
Msh6P54276 Gm45209-201ENSMUST00000207122 353 ntBASIC6.38□□□□□ -1.39
Msh6P54276 Ankrd42-207ENSMUST00000207131 1220 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Msh6P54276 Gm44582-201ENSMUST00000209125 445 ntBASIC6.38□□□□□ -1.39
Msh6P54276 Gm45343-201ENSMUST00000210452 828 ntBASIC6.38□□□□□ -1.39
Msh6P54276 AC137127.3-201ENSMUST00000213340 349 ntBASIC6.38□□□□□ -1.39
Msh6P54276 AC142273.1-201ENSMUST00000213723 673 ntBASIC6.38□□□□□ -1.39
Msh6P54276 Olfr123-201ENSMUST00000054748 930 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Msh6P54276 Krtap31-2-201ENSMUST00000058761 935 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Msh6P54276 Naip5-201ENSMUST00000049789 5204 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Msh6P54276 Olfr75-ps1-203ENSMUST00000144832 2655 ntTSL 2 BASIC6.38□□□□□ -1.39
Msh6P54276 Creb5-203ENSMUST00000203528 7917 ntAPPRIS P2 TSL 5 BASIC6.38□□□□□ -1.39
Msh6P54276 Olfr198-202ENSMUST00000208244 2200 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
Msh6P54276 Gm4922-201ENSMUST00000055107 1950 ntAPPRIS P1 TSL 3 BASIC6.38□□□□□ -1.39
Msh6P54276 Clec9a-201ENSMUST00000058352 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Msh6P54276 Postn-204ENSMUST00000117373 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Msh6P54276 Olfr536-201ENSMUST00000064392 3853 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms