Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm37776-201ENSMUST00000193471 2497 ntBASIC7.23□□□□□ -1.25
Rfx1P48377 Zfp936-201ENSMUST00000072829 1368 ntTSL 5 BASIC7.23□□□□□ -1.25
Rfx1P48377 Olfr1247-202ENSMUST00000111532 6070 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Rfx1P48377 Gm38375-201ENSMUST00000194610 2227 ntBASIC7.23□□□□□ -1.25
Rfx1P48377 Nebl-213ENSMUST00000177966 1690 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Rfx1P48377 Skap2-205ENSMUST00000204778 3382 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Rfx1P48377 Igkv3-5-201ENSMUST00000103400 382 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Rfx1P48377 Gm24869-201ENSMUST00000104072 128 ntBASIC7.23□□□□□ -1.25
Rfx1P48377 Gm11911-201ENSMUST00000117938 1023 ntBASIC7.23□□□□□ -1.25
Rfx1P48377 Gm11881-201ENSMUST00000119408 572 ntBASIC7.23□□□□□ -1.25
Rfx1P48377 Gm15153-201ENSMUST00000119867 274 ntBASIC7.23□□□□□ -1.25
Rfx1P48377 Gm14534-201ENSMUST00000120045 357 ntBASIC7.23□□□□□ -1.25
Rfx1P48377 Rps12-ps20-201ENSMUST00000121168 402 ntBASIC7.23□□□□□ -1.25
Rfx1P48377 Rps12-ps1-201ENSMUST00000121980 401 ntBASIC7.23□□□□□ -1.25
Rfx1P48377 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC7.23□□□□□ -1.25
Rfx1P48377 Gm16577-201ENSMUST00000161579 471 ntTSL 3 BASIC7.23□□□□□ -1.25
Rfx1P48377 Vmn1r88-201ENSMUST00000171783 951 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Rfx1P48377 Gm5871-201ENSMUST00000176461 718 ntBASIC7.23□□□□□ -1.25
Rfx1P48377 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC7.23□□□□□ -1.25
Rfx1P48377 Gm6803-201ENSMUST00000178301 435 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Rfx1P48377 Rps12-ps23-201ENSMUST00000179414 402 ntBASIC7.23□□□□□ -1.25
Rfx1P48377 Gm2075-201ENSMUST00000180285 435 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Rfx1P48377 Gm27317-201ENSMUST00000183533 95 ntBASIC7.23□□□□□ -1.25
Rfx1P48377 Gm29337-201ENSMUST00000185425 284 ntTSL 3 BASIC7.23□□□□□ -1.25
Rfx1P48377 Gm8403-201ENSMUST00000189712 1298 ntBASIC7.23□□□□□ -1.25
Rfx1P48377 Gm20885-201ENSMUST00000190192 654 ntBASIC7.23□□□□□ -1.25
Rfx1P48377 Gm29551-201ENSMUST00000190913 698 ntBASIC7.23□□□□□ -1.25
Rfx1P48377 Gm2367-201ENSMUST00000192374 472 ntBASIC7.23□□□□□ -1.25
Rfx1P48377 Gm29740-201ENSMUST00000193182 655 ntBASIC7.23□□□□□ -1.25
Rfx1P48377 Gm36866-201ENSMUST00000193343 657 ntBASIC7.23□□□□□ -1.25
Rfx1P48377 Gm36047-201ENSMUST00000193659 657 ntBASIC7.23□□□□□ -1.25
Rfx1P48377 Gm20857-201ENSMUST00000194766 657 ntBASIC7.23□□□□□ -1.25
Rfx1P48377 Gm20858-201ENSMUST00000195459 657 ntBASIC7.23□□□□□ -1.25
Rfx1P48377 Gm42707-201ENSMUST00000196620 322 ntTSL 5 BASIC7.23□□□□□ -1.25
Rfx1P48377 Trav3-2-201ENSMUST00000198999 305 ntBASIC7.23□□□□□ -1.25
Rfx1P48377 Olrf445-ps1-201ENSMUST00000204960 314 ntBASIC7.23□□□□□ -1.25
Rfx1P48377 Gm45075-201ENSMUST00000208426 649 ntTSL 3 BASIC7.23□□□□□ -1.25
Rfx1P48377 Gm39119-201ENSMUST00000208466 951 ntTSL 5 BASIC7.23□□□□□ -1.25
Rfx1P48377 Olfr562-ps1-201ENSMUST00000210779 951 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Rfx1P48377 Gm45473-201ENSMUST00000211452 616 ntBASIC7.23□□□□□ -1.25
Rfx1P48377 Gm46146-201ENSMUST00000217483 346 ntBASIC7.23□□□□□ -1.25
Rfx1P48377 Nqo2-201ENSMUST00000021843 1063 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Rfx1P48377 Olfr1324-203ENSMUST00000219631 1152 ntAPPRIS P2 BASIC7.23□□□□□ -1.25
Rfx1P48377 Gm2022-201ENSMUST00000220585 435 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Rfx1P48377 AC122465.3-201ENSMUST00000221644 355 ntBASIC7.23□□□□□ -1.25
Rfx1P48377 Gm5928-201ENSMUST00000221839 466 ntBASIC7.23□□□□□ -1.25
Rfx1P48377 AC154354.1-201ENSMUST00000224585 2109 ntBASIC7.23□□□□□ -1.25
Rfx1P48377 AC131747.1-201ENSMUST00000226159 793 ntBASIC7.23□□□□□ -1.25
Rfx1P48377 AC154563.1-201ENSMUST00000228317 442 ntBASIC7.23□□□□□ -1.25
Rfx1P48377 Glt6d1-201ENSMUST00000038010 1211 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Rfx1P48377 Olfr478-201ENSMUST00000049719 945 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Rfx1P48377 Olfr1324-201ENSMUST00000050044 1152 ntAPPRIS ALT2 BASIC7.23□□□□□ -1.25
Rfx1P48377 Olfr564-201ENSMUST00000061096 951 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Rfx1P48377 Olfr339-201ENSMUST00000071437 930 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Rfx1P48377 Olfr385-201ENSMUST00000071553 939 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Rfx1P48377 Olfr773-201ENSMUST00000072976 936 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Rfx1P48377 Olfr787-201ENSMUST00000077836 939 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Rfx1P48377 Gm26064-201ENSMUST00000083381 109 ntBASIC7.23□□□□□ -1.25
Rfx1P48377 Tex28-202ENSMUST00000114328 1421 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Rfx1P48377 Gm11516-201ENSMUST00000118450 1582 ntBASIC7.23□□□□□ -1.25
Rfx1P48377 Gm10693-202ENSMUST00000205904 4007 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Rfx1P48377 Dmtf1-202ENSMUST00000095017 3498 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Rfx1P48377 Vmn1r219-202ENSMUST00000226845 5979 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Rfx1P48377 Vmn1r219-205ENSMUST00000228666 5993 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Rfx1P48377 Olfr308-202ENSMUST00000214977 4991 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Rfx1P48377 Gm10568-201ENSMUST00000193244 1634 ntBASIC7.23□□□□□ -1.25
Rfx1P48377 Gm44530-201ENSMUST00000207920 3559 ntBASIC7.23□□□□□ -1.25
Rfx1P48377 Slc14a1-201ENSMUST00000091813 3665 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
Rfx1P48377 Olfr292-201ENSMUST00000080165 3211 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
Rfx1P48377 Olfr736-204ENSMUST00000215227 2485 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Rfx1P48377 Pign-206ENSMUST00000187537 4006 ntTSL 5 BASIC7.22□□□□□ -1.25
Rfx1P48377 Gm2381-201ENSMUST00000174558 4073 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Rfx1P48377 Vmn1r201-202ENSMUST00000226330 4770 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
Rfx1P48377 AC134577.3-201ENSMUST00000226490 3000 ntBASIC7.22□□□□□ -1.25
Rfx1P48377 Spata17-202ENSMUST00000110945 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Rfx1P48377 Gm14293-201ENSMUST00000118528 577 ntBASIC7.22□□□□□ -1.25
Rfx1P48377 Gm11869-201ENSMUST00000118701 329 ntBASIC7.22□□□□□ -1.25
Rfx1P48377 Gm12994-201ENSMUST00000119601 447 ntBASIC7.22□□□□□ -1.25
Rfx1P48377 Gm14998-201ENSMUST00000120502 495 ntBASIC7.22□□□□□ -1.25
Rfx1P48377 Gm8648-201ENSMUST00000122457 221 ntBASIC7.22□□□□□ -1.25
Rfx1P48377 Gm12655-202ENSMUST00000133884 925 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Rfx1P48377 Olfr377-ps1-201ENSMUST00000134011 1136 ntAPPRIS P1 TSL 3 BASIC7.22□□□□□ -1.25
Rfx1P48377 Gm12971-201ENSMUST00000154720 511 ntTSL 5 BASIC7.22□□□□□ -1.25
Rfx1P48377 Gm16132-201ENSMUST00000159296 598 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Rfx1P48377 Vmn1r176-201ENSMUST00000171073 915 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
Rfx1P48377 Sbp-205ENSMUST00000183017 700 ntTSL 5 BASIC7.22□□□□□ -1.25
Rfx1P48377 Hdlbp-204ENSMUST00000186164 3808 ntTSL 5 BASIC7.22□□□□□ -1.25
Rfx1P48377 Gm28217-201ENSMUST00000188613 648 ntTSL 5 BASIC7.22□□□□□ -1.25
Rfx1P48377 Gm37243-201ENSMUST00000193407 595 ntBASIC7.22□□□□□ -1.25
Rfx1P48377 Gm37126-201ENSMUST00000195289 883 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Rfx1P48377 Gm44990-201ENSMUST00000203922 217 ntBASIC7.22□□□□□ -1.25
Rfx1P48377 4930545L08Rik-201ENSMUST00000215688 566 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Rfx1P48377 AC151904.5-201ENSMUST00000218975 549 ntBASIC7.22□□□□□ -1.25
Rfx1P48377 CR974485.1-201ENSMUST00000222408 402 ntBASIC7.22□□□□□ -1.25
Rfx1P48377 Uqcrh-ps1-201ENSMUST00000038391 270 ntBASIC7.22□□□□□ -1.25
Rfx1P48377 Senp7-201ENSMUST00000049128 1190 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Rfx1P48377 Olfr198-201ENSMUST00000064452 1054 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
Rfx1P48377 Defb37-201ENSMUST00000066282 352 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Rfx1P48377 n-R5s95-201ENSMUST00000082684 118 ntBASIC7.22□□□□□ -1.25
Rfx1P48377 Gm22581-201ENSMUST00000083735 136 ntBASIC7.22□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 75.3 ms