Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Zfp995-201ENSMUST00000106026 1744 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
P20040 Gm37010-201ENSMUST00000194539 1704 ntBASIC4.52□□□□□ -1.69
P20040 4933403O08Rik-202ENSMUST00000152343 1520 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
P20040 Gm43333-201ENSMUST00000198340 2262 ntBASIC4.52□□□□□ -1.69
P20040 A230057D06Rik-201ENSMUST00000208961 3026 ntTSL 5 BASIC4.52□□□□□ -1.69
P20040 Gm45222-201ENSMUST00000207029 4307 ntBASIC4.52□□□□□ -1.69
P20040 Map3k19-201ENSMUST00000061512 3936 ntAPPRIS P2 TSL 5 BASIC4.52□□□□□ -1.69
P20040 Olfr620-201ENSMUST00000052152 3157 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
P20040 Lrrtm4-202ENSMUST00000126005 3733 ntTSL 5 BASIC4.52□□□□□ -1.69
P20040 Olfr1087-202ENSMUST00000214141 3861 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
P20040 Serpina1f-203ENSMUST00000118101 1453 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
P20040 Rpl38-ps2-201ENSMUST00000117356 213 ntBASIC4.52□□□□□ -1.69
P20040 Psmb6-ps-201ENSMUST00000117520 713 ntBASIC4.52□□□□□ -1.69
P20040 Gm8129-201ENSMUST00000118230 213 ntBASIC4.52□□□□□ -1.69
P20040 Gm12401-201ENSMUST00000118435 228 ntBASIC4.52□□□□□ -1.69
P20040 Gm14560-201ENSMUST00000118672 375 ntBASIC4.52□□□□□ -1.69
P20040 Gm13172-201ENSMUST00000118685 256 ntBASIC4.52□□□□□ -1.69
P20040 Gm6305-201ENSMUST00000121027 1012 ntBASIC4.52□□□□□ -1.69
P20040 Gm7670-201ENSMUST00000121272 641 ntBASIC4.52□□□□□ -1.69
P20040 Gm12332-201ENSMUST00000121397 922 ntBASIC4.52□□□□□ -1.69
P20040 Gm15017-201ENSMUST00000141989 632 ntTSL 5 BASIC4.52□□□□□ -1.69
P20040 Gm22895-201ENSMUST00000157508 308 ntBASIC4.52□□□□□ -1.69
P20040 Gm23897-201ENSMUST00000158110 158 ntBASIC4.52□□□□□ -1.69
P20040 Gm7609-204ENSMUST00000161424 461 ntBASIC4.52□□□□□ -1.69
P20040 Fam240b-201ENSMUST00000180282 1097 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
P20040 Gm29532-201ENSMUST00000185593 622 ntTSL 5 BASIC4.52□□□□□ -1.69
P20040 Gm29504-201ENSMUST00000185605 537 ntTSL 5 BASIC4.52□□□□□ -1.69
P20040 Gm29360-201ENSMUST00000185625 537 ntTSL 5 BASIC4.52□□□□□ -1.69
P20040 Gm29570-201ENSMUST00000185813 681 ntTSL 3 BASIC4.52□□□□□ -1.69
P20040 Gm28296-202ENSMUST00000186151 622 ntTSL 5 BASIC4.52□□□□□ -1.69
P20040 Gm29498-201ENSMUST00000186449 537 ntTSL 5 BASIC4.52□□□□□ -1.69
P20040 Gm28565-202ENSMUST00000186615 537 ntTSL 5 BASIC4.52□□□□□ -1.69
P20040 Gm28297-201ENSMUST00000186679 537 ntTSL 5 BASIC4.52□□□□□ -1.69
P20040 Gm28326-201ENSMUST00000187043 622 ntTSL 5 BASIC4.52□□□□□ -1.69
P20040 Gm28301-201ENSMUST00000187582 537 ntTSL 5 BASIC4.52□□□□□ -1.69
P20040 Gm28464-201ENSMUST00000187726 622 ntTSL 5 BASIC4.52□□□□□ -1.69
P20040 Gm29286-202ENSMUST00000187736 537 ntTSL 5 BASIC4.52□□□□□ -1.69
P20040 Gm28295-201ENSMUST00000188322 622 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
P20040 Gm29578-201ENSMUST00000188809 537 ntTSL 5 BASIC4.52□□□□□ -1.69
P20040 Gm29166-202ENSMUST00000189600 537 ntTSL 5 BASIC4.52□□□□□ -1.69
P20040 Gm28765-201ENSMUST00000189752 537 ntTSL 5 BASIC4.52□□□□□ -1.69
P20040 Gm28617-202ENSMUST00000190129 537 ntTSL 5 BASIC4.52□□□□□ -1.69
P20040 Gm28522-202ENSMUST00000190561 537 ntTSL 5 BASIC4.52□□□□□ -1.69
P20040 Gm28834-202ENSMUST00000190714 537 ntTSL 5 BASIC4.52□□□□□ -1.69
P20040 Gm28987-201ENSMUST00000191071 537 ntTSL 5 BASIC4.52□□□□□ -1.69
P20040 Gm29132-202ENSMUST00000191588 622 ntTSL 5 BASIC4.52□□□□□ -1.69
P20040 Gm30174-201ENSMUST00000191682 537 ntTSL 5 BASIC4.52□□□□□ -1.69
P20040 Gm36261-201ENSMUST00000191807 537 ntTSL 5 BASIC4.52□□□□□ -1.69
P20040 Gm7496-201ENSMUST00000192573 1034 ntBASIC4.52□□□□□ -1.69
P20040 Gm38011-201ENSMUST00000193312 279 ntBASIC4.52□□□□□ -1.69
P20040 Gm34550-202ENSMUST00000195186 537 ntTSL 5 BASIC4.52□□□□□ -1.69
P20040 Gm43093-201ENSMUST00000202439 1213 ntBASIC4.52□□□□□ -1.69
P20040 Gm44074-201ENSMUST00000204562 337 ntBASIC4.52□□□□□ -1.69
P20040 Gm18468-201ENSMUST00000207321 369 ntBASIC4.52□□□□□ -1.69
P20040 Gm18470-201ENSMUST00000207467 420 ntBASIC4.52□□□□□ -1.69
P20040 Gm18465-201ENSMUST00000207468 369 ntBASIC4.52□□□□□ -1.69
P20040 Gm18464-201ENSMUST00000207803 420 ntBASIC4.52□□□□□ -1.69
P20040 Gm18458-201ENSMUST00000207908 369 ntBASIC4.52□□□□□ -1.69
P20040 Gm18461-201ENSMUST00000208421 420 ntBASIC4.52□□□□□ -1.69
P20040 Gm33501-201ENSMUST00000209257 1193 ntTSL 5 BASIC4.52□□□□□ -1.69
P20040 Gm45359-201ENSMUST00000210635 427 ntBASIC4.52□□□□□ -1.69
P20040 Gm8189-203ENSMUST00000211159 1225 ntBASIC4.52□□□□□ -1.69
P20040 Gm15839-202ENSMUST00000211219 664 ntTSL 3 BASIC4.52□□□□□ -1.69
P20040 AC165245.1-201ENSMUST00000214181 636 ntTSL 3 BASIC4.52□□□□□ -1.69
P20040 Gm18899-201ENSMUST00000217663 546 ntBASIC4.52□□□□□ -1.69
P20040 Gm35326-201ENSMUST00000218234 1041 ntTSL 5 BASIC4.52□□□□□ -1.69
P20040 AC134439.1-201ENSMUST00000220923 600 ntBASIC4.52□□□□□ -1.69
P20040 AC132433.1-201ENSMUST00000221553 1101 ntBASIC4.52□□□□□ -1.69
P20040 CT030194.2-201ENSMUST00000225752 379 ntBASIC4.52□□□□□ -1.69
P20040 AC154838.2-201ENSMUST00000226602 747 ntBASIC4.52□□□□□ -1.69
P20040 AC154806.4-201ENSMUST00000227406 439 ntBASIC4.52□□□□□ -1.69
P20040 Rpl26-201ENSMUST00000073471 526 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
P20040 Gm23623-201ENSMUST00000082461 107 ntBASIC4.52□□□□□ -1.69
P20040 Gm23302-201ENSMUST00000082710 100 ntBASIC4.52□□□□□ -1.69
P20040 Mir188-201ENSMUST00000083464 68 ntBASIC4.52□□□□□ -1.69
P20040 Olfr1471-201ENSMUST00000096203 945 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
P20040 Gm5941-201ENSMUST00000096371 560 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
P20040 Olfr599-201ENSMUST00000098201 1050 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
P20040 Macf1-205ENSMUST00000106220 17608 ntTSL 5 BASIC4.52□□□□□ -1.69
P20040 Pou2f1-208ENSMUST00000160260 13022 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
P20040 Gm18186-201ENSMUST00000192239 1580 ntBASIC4.52□□□□□ -1.69
P20040 Gm42440-201ENSMUST00000197906 2284 ntBASIC4.52□□□□□ -1.69
P20040 Acsm3-204ENSMUST00000106528 2755 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
P20040 Vmn1r173-202ENSMUST00000226233 9416 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
P20040 Olfr1034-201ENSMUST00000213496 4882 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
P20040 Olfr698-204ENSMUST00000216255 4024 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
P20040 Wwp1-201ENSMUST00000035982 4832 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
P20040 Vmn1r37-202ENSMUST00000226311 1305 ntBASIC4.51□□□□□ -1.69
P20040 Gabra6-201ENSMUST00000020703 2436 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
P20040 Btbd35f15-201ENSMUST00000186329 1917 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
P20040 Mir879-201ENSMUST00000104703 76 ntBASIC4.51□□□□□ -1.69
P20040 Spata17-202ENSMUST00000110945 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
P20040 Gm11984-201ENSMUST00000118142 766 ntBASIC4.51□□□□□ -1.69
P20040 Gm14520-201ENSMUST00000119258 387 ntBASIC4.51□□□□□ -1.69
P20040 Gm14788-201ENSMUST00000119457 375 ntBASIC4.51□□□□□ -1.69
P20040 Olfr1298-201ENSMUST00000119566 939 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
P20040 Olfr405-ps1-201ENSMUST00000120649 936 ntBASIC4.51□□□□□ -1.69
P20040 Gm5383-201ENSMUST00000121177 617 ntBASIC4.51□□□□□ -1.69
P20040 Gm11805-201ENSMUST00000121238 600 ntBASIC4.51□□□□□ -1.69
P20040 Gm14369-201ENSMUST00000121355 285 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 94.5 ms