Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 4933423P22Rik-201ENSMUST00000126219 4595 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Chmp6P0C0A3 Gm15262-202ENSMUST00000207320 5010 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Chmp6P0C0A3 Nfat5-202ENSMUST00000077440 12773 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
Chmp6P0C0A3 Gm13452-201ENSMUST00000120896 1097 ntBASIC5.46□□□□□ -1.54
Chmp6P0C0A3 Gmfg-ps-201ENSMUST00000121071 427 ntBASIC5.46□□□□□ -1.54
Chmp6P0C0A3 n-R5s61-201ENSMUST00000122711 118 ntBASIC5.46□□□□□ -1.54
Chmp6P0C0A3 Gm16549-201ENSMUST00000160445 503 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Chmp6P0C0A3 Gm8321-201ENSMUST00000181691 980 ntBASIC5.46□□□□□ -1.54
Chmp6P0C0A3 Gm6717-201ENSMUST00000185549 838 ntBASIC5.46□□□□□ -1.54
Chmp6P0C0A3 Gm29813-201ENSMUST00000195856 447 ntBASIC5.46□□□□□ -1.54
Chmp6P0C0A3 Gm43724-201ENSMUST00000197516 226 ntBASIC5.46□□□□□ -1.54
Chmp6P0C0A3 Gm2623-201ENSMUST00000199229 286 ntBASIC5.46□□□□□ -1.54
Chmp6P0C0A3 Gm44330-201ENSMUST00000200106 143 ntBASIC5.46□□□□□ -1.54
Chmp6P0C0A3 Gm43428-201ENSMUST00000200108 3845 ntBASIC5.46□□□□□ -1.54
Chmp6P0C0A3 AC122034.1-201ENSMUST00000227641 595 ntBASIC5.46□□□□□ -1.54
Chmp6P0C0A3 AC154738.4-201ENSMUST00000228310 414 ntBASIC5.46□□□□□ -1.54
Chmp6P0C0A3 AC122035.2-201ENSMUST00000228698 462 ntBASIC5.46□□□□□ -1.54
Chmp6P0C0A3 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC5.46□□□□□ -1.54
Chmp6P0C0A3 Olfr192-201ENSMUST00000080251 925 ntBASIC5.46□□□□□ -1.54
Chmp6P0C0A3 Rd3l-203ENSMUST00000189759 1427 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Chmp6P0C0A3 Olfr1348-207ENSMUST00000209029 2696 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Chmp6P0C0A3 Vwa5a-201ENSMUST00000001544 4157 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Chmp6P0C0A3 Gm43831-201ENSMUST00000200461 2598 ntBASIC5.46□□□□□ -1.54
Chmp6P0C0A3 Fastkd2-201ENSMUST00000027103 4486 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Chmp6P0C0A3 Gm26582-201ENSMUST00000181481 3135 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Chmp6P0C0A3 Kynu-202ENSMUST00000050511 2778 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Chmp6P0C0A3 Il5ra-202ENSMUST00000204659 3575 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Chmp6P0C0A3 Gprc6a-202ENSMUST00000218684 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
Chmp6P0C0A3 Gm38264-201ENSMUST00000194850 2032 ntBASIC5.45□□□□□ -1.54
Chmp6P0C0A3 Vmn1r57-202ENSMUST00000227798 2409 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Chmp6P0C0A3 Xkr9-201ENSMUST00000088542 1926 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Chmp6P0C0A3 Fam83b-201ENSMUST00000098546 3136 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Chmp6P0C0A3 Egfros-201ENSMUST00000150329 4063 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Chmp6P0C0A3 Entpd1-201ENSMUST00000112231 4221 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
Chmp6P0C0A3 Trbv13-2-201ENSMUST00000103270 340 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Chmp6P0C0A3 Zfp972-202ENSMUST00000108934 561 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Chmp6P0C0A3 Defb30-202ENSMUST00000111207 989 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
Chmp6P0C0A3 Olfr1083-ps-201ENSMUST00000117704 943 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Chmp6P0C0A3 Gm15772-201ENSMUST00000118533 438 ntBASIC5.45□□□□□ -1.54
Chmp6P0C0A3 Gm25290-201ENSMUST00000122796 144 ntBASIC5.45□□□□□ -1.54
Chmp6P0C0A3 Gm16222-201ENSMUST00000124320 1298 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Chmp6P0C0A3 4930519F16Rik-202ENSMUST00000127012 685 ntTSL 3 BASIC5.45□□□□□ -1.54
Chmp6P0C0A3 Prlr-212ENSMUST00000148257 1190 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
Chmp6P0C0A3 4930563I02Rik-202ENSMUST00000154835 971 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Chmp6P0C0A3 I0C0044D17Rik-202ENSMUST00000168045 510 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Chmp6P0C0A3 Rpl9-ps5-201ENSMUST00000174221 571 ntBASIC5.45□□□□□ -1.54
Chmp6P0C0A3 Vmn1r-ps22-201ENSMUST00000176017 900 ntBASIC5.45□□□□□ -1.54
Chmp6P0C0A3 Gm4791-201ENSMUST00000178065 1021 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Chmp6P0C0A3 Gm21959-201ENSMUST00000178439 452 ntBASIC5.45□□□□□ -1.54
Chmp6P0C0A3 Fam240b-201ENSMUST00000180282 1097 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Chmp6P0C0A3 Gm28660-201ENSMUST00000186496 253 ntBASIC5.45□□□□□ -1.54
Chmp6P0C0A3 Gm28061-201ENSMUST00000189085 807 ntBASIC5.45□□□□□ -1.54
Chmp6P0C0A3 Gm28567-201ENSMUST00000190270 693 ntBASIC5.45□□□□□ -1.54
Chmp6P0C0A3 Ighv6-2-201ENSMUST00000192430 295 ntBASIC5.45□□□□□ -1.54
Chmp6P0C0A3 Gm37044-201ENSMUST00000193531 693 ntBASIC5.45□□□□□ -1.54
Chmp6P0C0A3 Gm38369-201ENSMUST00000195101 693 ntBASIC5.45□□□□□ -1.54
Chmp6P0C0A3 Gm32554-201ENSMUST00000196310 970 ntTSL 5 BASIC5.45□□□□□ -1.54
Chmp6P0C0A3 BX530055.1-201ENSMUST00000197285 122 ntBASIC5.45□□□□□ -1.54
Chmp6P0C0A3 1700126G02Rik-201ENSMUST00000204351 725 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Chmp6P0C0A3 Gm45004-201ENSMUST00000205302 465 ntTSL 2 BASIC5.45□□□□□ -1.54
Chmp6P0C0A3 E230029C05Rik-206ENSMUST00000208547 814 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Chmp6P0C0A3 Olfr1092-ps1-201ENSMUST00000216544 398 ntBASIC5.45□□□□□ -1.54
Chmp6P0C0A3 AC159619.1-201ENSMUST00000219118 318 ntTSL 5 BASIC5.45□□□□□ -1.54
Chmp6P0C0A3 AC124687.2-201ENSMUST00000221927 1228 ntTSL 5 BASIC5.45□□□□□ -1.54
Chmp6P0C0A3 AC162183.1-202ENSMUST00000225434 904 ntBASIC5.45□□□□□ -1.54
Chmp6P0C0A3 Ocm-201ENSMUST00000031622 658 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Chmp6P0C0A3 Olfr266-201ENSMUST00000059486 1027 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Chmp6P0C0A3 Gm23972-201ENSMUST00000083322 165 ntBASIC5.45□□□□□ -1.54
Chmp6P0C0A3 Trmt2b-201ENSMUST00000087540 822 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Chmp6P0C0A3 Vmn1r34-204ENSMUST00000226999 3048 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Chmp6P0C0A3 Vmn2r89-201ENSMUST00000159611 2942 ntAPPRIS P4 TSL 1 (best) BASIC5.45□□□□□ -1.54
Chmp6P0C0A3 Gm44144-201ENSMUST00000203683 1960 ntBASIC5.45□□□□□ -1.54
Chmp6P0C0A3 Vmn1r37-203ENSMUST00000226886 1308 ntBASIC5.45□□□□□ -1.54
Chmp6P0C0A3 F13a1-201ENSMUST00000037491 3952 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Chmp6P0C0A3 Zscan4-ps1-201ENSMUST00000165848 2015 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Chmp6P0C0A3 Mdn1-201ENSMUST00000071642 17970 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
Chmp6P0C0A3 Fap-201ENSMUST00000000402 2187 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
Chmp6P0C0A3 Gm5444-201ENSMUST00000065956 2468 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Chmp6P0C0A3 Pate2-202ENSMUST00000118254 2215 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Chmp6P0C0A3 Olfr198-202ENSMUST00000208244 2200 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
Chmp6P0C0A3 Nlrp1b-202ENSMUST00000108514 3541 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
Chmp6P0C0A3 Olfr1263-202ENSMUST00000214382 4400 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Chmp6P0C0A3 AA792892-201ENSMUST00000097477 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Chmp6P0C0A3 Gm43164-201ENSMUST00000202529 2128 ntBASIC5.44□□□□□ -1.54
Chmp6P0C0A3 Trav16d-dv11-201ENSMUST00000103606 353 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Chmp6P0C0A3 Lrrc51-207ENSMUST00000106967 675 ntTSL 3 BASIC5.44□□□□□ -1.54
Chmp6P0C0A3 Gm12007-201ENSMUST00000120978 597 ntBASIC5.44□□□□□ -1.54
Chmp6P0C0A3 Gm7973-201ENSMUST00000122107 488 ntBASIC5.44□□□□□ -1.54
Chmp6P0C0A3 Gm7879-201ENSMUST00000122204 774 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Chmp6P0C0A3 Gm12519-201ENSMUST00000134099 693 ntTSL 5 BASIC5.44□□□□□ -1.54
Chmp6P0C0A3 C030037F17Rik-201ENSMUST00000155211 406 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Chmp6P0C0A3 Gm17044-201ENSMUST00000168549 828 ntBASIC5.44□□□□□ -1.54
Chmp6P0C0A3 Isx-202ENSMUST00000174427 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Chmp6P0C0A3 Gm27688-201ENSMUST00000183634 91 ntBASIC5.44□□□□□ -1.54
Chmp6P0C0A3 Gm21803-201ENSMUST00000188897 693 ntBASIC5.44□□□□□ -1.54
Chmp6P0C0A3 Gm37355-201ENSMUST00000193345 606 ntBASIC5.44□□□□□ -1.54
Chmp6P0C0A3 4930447N08Rik-201ENSMUST00000196290 497 ntTSL 3 BASIC5.44□□□□□ -1.54
Chmp6P0C0A3 Gm22897-202ENSMUST00000197782 127 ntBASIC5.44□□□□□ -1.54
Chmp6P0C0A3 Mir6994-201ENSMUST00000198985 73 ntBASIC5.44□□□□□ -1.54
Chmp6P0C0A3 Gm9038-201ENSMUST00000203400 604 ntBASIC5.44□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms