Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Gm12127-201ENSMUST00000123278 706 ntTSL 3 BASIC5.3□□□□□ -1.56
TnfP06804 Gm16260-201ENSMUST00000155141 304 ntBASIC5.3□□□□□ -1.56
TnfP06804 Gm26404-201ENSMUST00000158498 109 ntBASIC5.3□□□□□ -1.56
TnfP06804 Gm15882-201ENSMUST00000161344 855 ntTSL 3 BASIC5.3□□□□□ -1.56
TnfP06804 Fabp7-202ENSMUST00000165013 880 ntTSL 2 BASIC5.3□□□□□ -1.56
TnfP06804 Obox3-ps8-201ENSMUST00000177182 960 ntBASIC5.3□□□□□ -1.56
TnfP06804 Gm25019-201ENSMUST00000179732 110 ntBASIC5.3□□□□□ -1.56
TnfP06804 Gm9687-201ENSMUST00000189312 602 ntBASIC5.3□□□□□ -1.56
TnfP06804 2310020H05Rik-201ENSMUST00000189489 720 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
TnfP06804 Gm18426-201ENSMUST00000191874 973 ntBASIC5.3□□□□□ -1.56
TnfP06804 Gm38163-201ENSMUST00000194112 482 ntTSL 5 BASIC5.3□□□□□ -1.56
TnfP06804 Gm37973-201ENSMUST00000195767 1289 ntBASIC5.3□□□□□ -1.56
TnfP06804 Gm33758-201ENSMUST00000199230 407 ntTSL 3 BASIC5.3□□□□□ -1.56
TnfP06804 Gm43136-201ENSMUST00000200403 636 ntBASIC5.3□□□□□ -1.56
TnfP06804 E230029C05Rik-206ENSMUST00000208547 814 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
TnfP06804 Gm17766-201ENSMUST00000209223 442 ntBASIC5.3□□□□□ -1.56
TnfP06804 AC131997.2-201ENSMUST00000227452 362 ntBASIC5.3□□□□□ -1.56
TnfP06804 Olfr720-201ENSMUST00000035250 1023 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
TnfP06804 Ssxb1-201ENSMUST00000037297 875 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
TnfP06804 Desi2-202ENSMUST00000069568 1193 ntBASIC5.3□□□□□ -1.56
TnfP06804 Dnah12-202ENSMUST00000073309 611 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
TnfP06804 Gm22220-201ENSMUST00000082671 149 ntBASIC5.3□□□□□ -1.56
TnfP06804 Smim4-203ENSMUST00000090205 426 ntTSL 2 BASIC5.3□□□□□ -1.56
TnfP06804 Vav3-202ENSMUST00000106576 3123 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
TnfP06804 Fcrl5-205ENSMUST00000194102 2449 ntAPPRIS P4 TSL 1 (best) BASIC5.3□□□□□ -1.56
TnfP06804 Vmn1r171-211ENSMUST00000228559 2637 ntAPPRIS ALT2 BASIC5.3□□□□□ -1.56
TnfP06804 Vmn1r171-213ENSMUST00000228681 2633 ntAPPRIS ALT2 BASIC5.3□□□□□ -1.56
TnfP06804 Lgi1-206ENSMUST00000198045 1483 ntTSL 5 BASIC5.3□□□□□ -1.56
TnfP06804 Gm43130-201ENSMUST00000197721 3907 ntBASIC5.3□□□□□ -1.56
TnfP06804 Gm43154-208ENSMUST00000209658 1442 ntTSL 5 BASIC5.3□□□□□ -1.56
TnfP06804 Gm15638-201ENSMUST00000128159 2062 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
TnfP06804 Olfr390-204ENSMUST00000215161 3740 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
TnfP06804 Olfr221-202ENSMUST00000214071 3044 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
TnfP06804 Olfr446-203ENSMUST00000215686 4210 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
TnfP06804 Olfr446-204ENSMUST00000216199 4218 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
TnfP06804 Gm43121-201ENSMUST00000199065 1305 ntBASIC5.29□□□□□ -1.56
TnfP06804 B3galt1-202ENSMUST00000112346 4977 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
TnfP06804 P2ry12-202ENSMUST00000170388 2101 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
TnfP06804 CT025710.1-201ENSMUST00000222949 2533 ntBASIC5.29□□□□□ -1.56
TnfP06804 Zzz3-204ENSMUST00000106103 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
TnfP06804 Gm5715-201ENSMUST00000196854 1465 ntBASIC5.29□□□□□ -1.56
TnfP06804 Tmsb15b1-201ENSMUST00000113071 439 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
TnfP06804 Gm14711-201ENSMUST00000117056 217 ntBASIC5.29□□□□□ -1.56
TnfP06804 Gm12317-201ENSMUST00000122307 319 ntBASIC5.29□□□□□ -1.56
TnfP06804 Gm24685-201ENSMUST00000157764 285 ntBASIC5.29□□□□□ -1.56
TnfP06804 Gm17023-201ENSMUST00000165885 448 ntTSL 2 BASIC5.29□□□□□ -1.56
TnfP06804 Vmn1r170-201ENSMUST00000170166 915 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
TnfP06804 Vmn1r57-201ENSMUST00000170780 933 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
TnfP06804 Gm20711-201ENSMUST00000177351 714 ntTSL 3 BASIC5.29□□□□□ -1.56
TnfP06804 BC065403-201ENSMUST00000180997 1022 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
TnfP06804 S100a11-ps-201ENSMUST00000181735 306 ntBASIC5.29□□□□□ -1.56
TnfP06804 1700031M16Rik-204ENSMUST00000189724 824 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
TnfP06804 1700031M16Rik-207ENSMUST00000191513 847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
TnfP06804 Fxyd1-210ENSMUST00000206012 501 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
TnfP06804 Gm44648-201ENSMUST00000208267 329 ntBASIC5.29□□□□□ -1.56
TnfP06804 Gm44582-201ENSMUST00000209125 445 ntBASIC5.29□□□□□ -1.56
TnfP06804 Gm45305-201ENSMUST00000209799 815 ntTSL 5 BASIC5.29□□□□□ -1.56
TnfP06804 Jakmip1-216ENSMUST00000212997 138 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
TnfP06804 Olfr603-202ENSMUST00000218246 1021 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
TnfP06804 CT025616.1-201ENSMUST00000221158 412 ntBASIC5.29□□□□□ -1.56
TnfP06804 AC123705.4-202ENSMUST00000221602 697 ntTSL 2 BASIC5.29□□□□□ -1.56
TnfP06804 Selenok-ps8-201ENSMUST00000221926 280 ntBASIC5.29□□□□□ -1.56
TnfP06804 CT954323.2-201ENSMUST00000222056 213 ntBASIC5.29□□□□□ -1.56
TnfP06804 AC125399.1-201ENSMUST00000224236 595 ntBASIC5.29□□□□□ -1.56
TnfP06804 Anxa13-202ENSMUST00000227274 1201 ntBASIC5.29□□□□□ -1.56
TnfP06804 AC133910.1-201ENSMUST00000228128 624 ntBASIC5.29□□□□□ -1.56
TnfP06804 Vmn1r33-201ENSMUST00000079678 1036 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
TnfP06804 Vmn2r110-201ENSMUST00000169559 2577 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
TnfP06804 Rprd2-202ENSMUST00000197449 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
TnfP06804 Jchain-201ENSMUST00000087033 1393 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
TnfP06804 4930431P03Rik-202ENSMUST00000166127 4237 ntTSL 2 BASIC5.28□□□□□ -1.56
TnfP06804 Stxbp4-207ENSMUST00000143203 5985 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
TnfP06804 Epha7-201ENSMUST00000029964 6746 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
TnfP06804 Crebrf-201ENSMUST00000062519 7462 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
TnfP06804 Gm38126-201ENSMUST00000195297 4003 ntBASIC5.28□□□□□ -1.56
TnfP06804 Herc2-202ENSMUST00000164095 15261 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
TnfP06804 Scimp-202ENSMUST00000108534 1080 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
TnfP06804 Mup-ps18-201ENSMUST00000120145 531 ntBASIC5.28□□□□□ -1.56
TnfP06804 Gm16463-201ENSMUST00000120527 721 ntBASIC5.28□□□□□ -1.56
TnfP06804 Gm22343-201ENSMUST00000122648 286 ntBASIC5.28□□□□□ -1.56
TnfP06804 Gm25103-201ENSMUST00000122671 318 ntBASIC5.28□□□□□ -1.56
TnfP06804 Gm11844-201ENSMUST00000129207 459 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TnfP06804 Grip1os1-202ENSMUST00000135940 1192 ntTSL 5 BASIC5.28□□□□□ -1.56
TnfP06804 Gm12707-201ENSMUST00000155789 489 ntTSL 3 BASIC5.28□□□□□ -1.56
TnfP06804 Gm24217-201ENSMUST00000158260 133 ntBASIC5.28□□□□□ -1.56
TnfP06804 Gm23046-201ENSMUST00000158369 284 ntBASIC5.28□□□□□ -1.56
TnfP06804 Gm25655-201ENSMUST00000158465 290 ntBASIC5.28□□□□□ -1.56
TnfP06804 Speer4cos-201ENSMUST00000162113 1083 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TnfP06804 Snhg6-205ENSMUST00000182819 816 ntTSL 2 BASIC5.28□□□□□ -1.56
TnfP06804 Gm19585-201ENSMUST00000186007 587 ntTSL 2 BASIC5.28□□□□□ -1.56
TnfP06804 Gm28129-201ENSMUST00000186273 537 ntTSL 5 BASIC5.28□□□□□ -1.56
TnfP06804 Gm28083-201ENSMUST00000186533 538 ntTSL 5 BASIC5.28□□□□□ -1.56
TnfP06804 Gm9569-201ENSMUST00000187492 787 ntBASIC5.28□□□□□ -1.56
TnfP06804 Gm18177-201ENSMUST00000188373 404 ntBASIC5.28□□□□□ -1.56
TnfP06804 Gm29332-201ENSMUST00000190829 227 ntBASIC5.28□□□□□ -1.56
TnfP06804 Gm43391-201ENSMUST00000196145 883 ntTSL 5 BASIC5.28□□□□□ -1.56
TnfP06804 Gm21847-202ENSMUST00000198681 883 ntTSL 5 BASIC5.28□□□□□ -1.56
TnfP06804 Gm44463-201ENSMUST00000198895 137 ntBASIC5.28□□□□□ -1.56
TnfP06804 Snhg1-205ENSMUST00000205825 495 ntTSL 3 BASIC5.28□□□□□ -1.56
TnfP06804 Zfp78-206ENSMUST00000208390 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 77.1 ms