Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Pmis2-201ENSMUST00000051495 699 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Scn3aA2ASI5 Olfr1205-201ENSMUST00000076438 924 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Scn3aA2ASI5 Gm25147-201ENSMUST00000083030 105 ntBASIC5.5□□□□□ -1.53
Scn3aA2ASI5 Olfr33-201ENSMUST00000084817 957 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Scn3aA2ASI5 Vmn2r28-201ENSMUST00000086297 3785 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Scn3aA2ASI5 Vmn1r90-201ENSMUST00000185220 7144 ntAPPRIS P2 BASIC5.5□□□□□ -1.53
Scn3aA2ASI5 Mmp8-201ENSMUST00000018765 2425 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Scn3aA2ASI5 Cnot6l-202ENSMUST00000113005 3170 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
Scn3aA2ASI5 Enpp3-201ENSMUST00000020169 4253 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Scn3aA2ASI5 Mug-ps1-201ENSMUST00000186891 4386 ntBASIC5.49□□□□□ -1.53
Scn3aA2ASI5 Gm16106-201ENSMUST00000119187 294 ntBASIC5.49□□□□□ -1.53
Scn3aA2ASI5 Gm12583-201ENSMUST00000120677 853 ntBASIC5.49□□□□□ -1.53
Scn3aA2ASI5 Gm12925-203ENSMUST00000140510 665 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Scn3aA2ASI5 Gm17669-201ENSMUST00000163749 465 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Scn3aA2ASI5 Vdac2-208ENSMUST00000172727 1291 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
Scn3aA2ASI5 Vmn1r-ps52-201ENSMUST00000177426 862 ntBASIC5.49□□□□□ -1.53
Scn3aA2ASI5 Gm8614-201ENSMUST00000182528 978 ntBASIC5.49□□□□□ -1.53
Scn3aA2ASI5 Mir7028-201ENSMUST00000185016 64 ntBASIC5.49□□□□□ -1.53
Scn3aA2ASI5 Gm37836-201ENSMUST00000195875 175 ntBASIC5.49□□□□□ -1.53
Scn3aA2ASI5 Gm42643-201ENSMUST00000200504 279 ntBASIC5.49□□□□□ -1.53
Scn3aA2ASI5 Gm44138-201ENSMUST00000204939 271 ntBASIC5.49□□□□□ -1.53
Scn3aA2ASI5 Gm45004-201ENSMUST00000205302 465 ntTSL 2 BASIC5.49□□□□□ -1.53
Scn3aA2ASI5 Gm44757-201ENSMUST00000206373 157 ntBASIC5.49□□□□□ -1.53
Scn3aA2ASI5 Gm19666-201ENSMUST00000198176 1893 ntBASIC5.49□□□□□ -1.53
Scn3aA2ASI5 Olfr510-204ENSMUST00000217170 2997 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Scn3aA2ASI5 Olfr270-204ENSMUST00000215127 3145 ntAPPRIS ALT1 TSL 5 BASIC5.49□□□□□ -1.53
Scn3aA2ASI5 Olfr1290-204ENSMUST00000217611 2729 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
Scn3aA2ASI5 Gm2309-201ENSMUST00000149994 1941 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Scn3aA2ASI5 Gm4541-201ENSMUST00000208901 1848 ntBASIC5.49□□□□□ -1.53
Scn3aA2ASI5 Naip6-202ENSMUST00000118574 6827 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Scn3aA2ASI5 Unc13c-201ENSMUST00000075245 6633 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Scn3aA2ASI5 Casp1-201ENSMUST00000027015 1497 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Scn3aA2ASI5 Trpm7-201ENSMUST00000028843 6985 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Scn3aA2ASI5 Gm12820-201ENSMUST00000119233 342 ntBASIC5.48□□□□□ -1.53
Scn3aA2ASI5 Gm25534-201ENSMUST00000175365 125 ntBASIC5.48□□□□□ -1.53
Scn3aA2ASI5 Olr1-204ENSMUST00000183258 468 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Scn3aA2ASI5 Gm27387-201ENSMUST00000184583 116 ntBASIC5.48□□□□□ -1.53
Scn3aA2ASI5 Gm36983-201ENSMUST00000192280 1102 ntBASIC5.48□□□□□ -1.53
Scn3aA2ASI5 Gm18382-201ENSMUST00000194394 582 ntBASIC5.48□□□□□ -1.53
Scn3aA2ASI5 AC159809.1-201ENSMUST00000216235 520 ntTSL 5 BASIC5.48□□□□□ -1.53
Scn3aA2ASI5 Gm7822-201ENSMUST00000222433 581 ntBASIC5.48□□□□□ -1.53
Scn3aA2ASI5 Olfr1039-201ENSMUST00000099910 960 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Scn3aA2ASI5 Olfr1238-202ENSMUST00000217226 5241 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Scn3aA2ASI5 Naalad2-207ENSMUST00000172171 4066 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Scn3aA2ASI5 Gm44250-201ENSMUST00000203092 4229 ntBASIC5.48□□□□□ -1.53
Scn3aA2ASI5 Ndst3-201ENSMUST00000029602 5335 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Scn3aA2ASI5 Cep57l1-201ENSMUST00000019951 2177 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
Scn3aA2ASI5 AC153532.3-201ENSMUST00000218660 3848 ntBASIC5.48□□□□□ -1.53
Scn3aA2ASI5 Gm3978-201ENSMUST00000163406 2512 ntBASIC5.48□□□□□ -1.53
Scn3aA2ASI5 AC151904.4-201ENSMUST00000219868 1319 ntBASIC5.48□□□□□ -1.53
Scn3aA2ASI5 Zfp867-201ENSMUST00000057799 3412 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Scn3aA2ASI5 Psmc6-201ENSMUST00000022380 2234 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Scn3aA2ASI5 Kcnma1-204ENSMUST00000112423 3664 ntTSL 5 BASIC5.48□□□□□ -1.53
Scn3aA2ASI5 Gm1966-201ENSMUST00000184540 7293 ntBASIC5.48□□□□□ -1.53
Scn3aA2ASI5 Klri2-201ENSMUST00000050385 3913 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Scn3aA2ASI5 Nxf3-201ENSMUST00000080929 2978 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Scn3aA2ASI5 Dcun1d4-202ENSMUST00000087181 4117 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Scn3aA2ASI5 Olfr270-203ENSMUST00000215010 2502 ntAPPRIS ALT1 TSL 5 BASIC5.48□□□□□ -1.53
Scn3aA2ASI5 Btbd35f13-201ENSMUST00000177912 1701 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Scn3aA2ASI5 AC123705.3-201ENSMUST00000223531 2069 ntBASIC5.48□□□□□ -1.53
Scn3aA2ASI5 Gm44535-201ENSMUST00000208889 3136 ntBASIC5.48□□□□□ -1.53
Scn3aA2ASI5 Gm11914-201ENSMUST00000117094 507 ntBASIC5.48□□□□□ -1.53
Scn3aA2ASI5 Gm13250-201ENSMUST00000117209 753 ntBASIC5.48□□□□□ -1.53
Scn3aA2ASI5 Gm14082-201ENSMUST00000118582 801 ntBASIC5.48□□□□□ -1.53
Scn3aA2ASI5 Gm15591-201ENSMUST00000138539 627 ntTSL 5 BASIC5.48□□□□□ -1.53
Scn3aA2ASI5 Tmem132cos-202ENSMUST00000154361 699 ntTSL 3 BASIC5.48□□□□□ -1.53
Scn3aA2ASI5 Mrgprc4-ps-201ENSMUST00000186018 964 ntBASIC5.48□□□□□ -1.53
Scn3aA2ASI5 Gm37243-201ENSMUST00000193407 595 ntBASIC5.48□□□□□ -1.53
Scn3aA2ASI5 Gm9238-201ENSMUST00000196181 329 ntBASIC5.48□□□□□ -1.53
Scn3aA2ASI5 Gm44738-201ENSMUST00000206393 371 ntTSL 2 BASIC5.48□□□□□ -1.53
Scn3aA2ASI5 Gm45651-201ENSMUST00000210857 335 ntBASIC5.48□□□□□ -1.53
Scn3aA2ASI5 CT025552.2-201ENSMUST00000225497 317 ntBASIC5.48□□□□□ -1.53
Scn3aA2ASI5 Olfr1321-201ENSMUST00000088876 1056 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Scn3aA2ASI5 1700057G04Rik-201ENSMUST00000098477 1052 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Scn3aA2ASI5 Obox3-202ENSMUST00000095217 1603 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Scn3aA2ASI5 Vmn2r116-201ENSMUST00000164856 2571 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Scn3aA2ASI5 Iqca-207ENSMUST00000212394 2574 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
Scn3aA2ASI5 AC126439.1-201ENSMUST00000226772 2104 ntBASIC5.48□□□□□ -1.53
Scn3aA2ASI5 Gm28940-201ENSMUST00000187929 1682 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Scn3aA2ASI5 Gbp7-201ENSMUST00000045097 5614 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Scn3aA2ASI5 Adam28-201ENSMUST00000022642 3110 ntAPPRIS P4 TSL 1 (best) BASIC5.47□□□□□ -1.53
Scn3aA2ASI5 Ncoa6-201ENSMUST00000043126 6872 ntAPPRIS P2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Scn3aA2ASI5 Zfp78-204ENSMUST00000207347 3883 ntAPPRIS P4 TSL 1 (best) BASIC5.47□□□□□ -1.53
Scn3aA2ASI5 Gm38243-201ENSMUST00000194737 1567 ntBASIC5.47□□□□□ -1.53
Scn3aA2ASI5 AC105407.2-201ENSMUST00000223707 3911 ntBASIC5.47□□□□□ -1.53
Scn3aA2ASI5 Olfr465-ps1-201ENSMUST00000206324 2234 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Scn3aA2ASI5 Mup6-201ENSMUST00000107517 926 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Scn3aA2ASI5 Gm14706-201ENSMUST00000117744 255 ntBASIC5.47□□□□□ -1.53
Scn3aA2ASI5 Gm12237-201ENSMUST00000120158 470 ntBASIC5.47□□□□□ -1.53
Scn3aA2ASI5 Gm12711-201ENSMUST00000131249 340 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Scn3aA2ASI5 Gm15735-201ENSMUST00000136187 514 ntTSL 3 BASIC5.47□□□□□ -1.53
Scn3aA2ASI5 Gm13632-201ENSMUST00000150119 384 ntTSL 5 BASIC5.47□□□□□ -1.53
Scn3aA2ASI5 Gm13617-201ENSMUST00000155350 675 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Scn3aA2ASI5 Klrb1a-202ENSMUST00000171306 989 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Scn3aA2ASI5 Gm26895-201ENSMUST00000181295 619 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Scn3aA2ASI5 Gm38180-201ENSMUST00000192381 395 ntTSL 5 BASIC5.47□□□□□ -1.53
Scn3aA2ASI5 Obox4-ps32-201ENSMUST00000196512 537 ntBASIC5.47□□□□□ -1.53
Scn3aA2ASI5 Gm43678-201ENSMUST00000197774 328 ntTSL 3 BASIC5.47□□□□□ -1.53
Scn3aA2ASI5 Gm44402-201ENSMUST00000203677 238 ntBASIC5.47□□□□□ -1.53
Scn3aA2ASI5 BC024386-203ENSMUST00000209817 825 ntTSL 5 BASIC5.47□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms