Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Gm44144-201ENSMUST00000203683 1960 ntBASIC5.12□□□□□ -1.59
Scn1aA2APX8 Olfr417-203ENSMUST00000220394 6080 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Scn1aA2APX8 Olfr1330-202ENSMUST00000105035 1027 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
Scn1aA2APX8 Gm14756-201ENSMUST00000116395 240 ntBASIC5.12□□□□□ -1.59
Scn1aA2APX8 Gm14388-201ENSMUST00000118119 477 ntBASIC5.12□□□□□ -1.59
Scn1aA2APX8 Gm5391-201ENSMUST00000121155 613 ntBASIC5.12□□□□□ -1.59
Scn1aA2APX8 Gm11910-201ENSMUST00000121624 432 ntBASIC5.12□□□□□ -1.59
Scn1aA2APX8 Klrb1a-202ENSMUST00000171306 989 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
Scn1aA2APX8 Gm27037-201ENSMUST00000182270 960 ntBASIC5.12□□□□□ -1.59
Scn1aA2APX8 Gm18752-202ENSMUST00000193627 587 ntTSL 3 BASIC5.12□□□□□ -1.59
Scn1aA2APX8 Gm45052-201ENSMUST00000206457 405 ntTSL 2 BASIC5.12□□□□□ -1.59
Scn1aA2APX8 Gm44603-201ENSMUST00000206820 367 ntBASIC5.12□□□□□ -1.59
Scn1aA2APX8 AC158803.3-201ENSMUST00000220024 211 ntBASIC5.12□□□□□ -1.59
Scn1aA2APX8 CT025616.1-201ENSMUST00000221158 412 ntBASIC5.12□□□□□ -1.59
Scn1aA2APX8 Tpbpb-202ENSMUST00000223698 746 ntAPPRIS P2 BASIC5.12□□□□□ -1.59
Scn1aA2APX8 Glipr1l1-201ENSMUST00000073617 896 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Scn1aA2APX8 Hist1h2bb-201ENSMUST00000099703 508 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Scn1aA2APX8 Vmn1r71-203ENSMUST00000227003 5048 ntAPPRIS P2 BASIC5.12□□□□□ -1.59
Scn1aA2APX8 Ryr3-211ENSMUST00000208290 15468 ntAPPRIS P3 TSL 5 BASIC5.12□□□□□ -1.59
Scn1aA2APX8 Gm19552-201ENSMUST00000194744 2833 ntBASIC5.12□□□□□ -1.59
Scn1aA2APX8 4932411K12Rik-201ENSMUST00000190493 3156 ntTSL 2 BASIC5.12□□□□□ -1.59
Scn1aA2APX8 Olfr329-ps-203ENSMUST00000219448 4052 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
Scn1aA2APX8 Gm4541-201ENSMUST00000208901 1848 ntBASIC5.12□□□□□ -1.59
Scn1aA2APX8 Ighv5-9-1-201ENSMUST00000103452 350 ntAPPRIS ALT2 BASIC5.11□□□□□ -1.59
Scn1aA2APX8 Rps19-ps7-201ENSMUST00000116122 438 ntBASIC5.11□□□□□ -1.59
Scn1aA2APX8 Gm23046-201ENSMUST00000158369 284 ntBASIC5.11□□□□□ -1.59
Scn1aA2APX8 Gm4557-201ENSMUST00000185826 907 ntBASIC5.11□□□□□ -1.59
Scn1aA2APX8 Gm4526-201ENSMUST00000186039 920 ntBASIC5.11□□□□□ -1.59
Scn1aA2APX8 Gm19206-201ENSMUST00000186401 827 ntBASIC5.11□□□□□ -1.59
Scn1aA2APX8 Gm8708-201ENSMUST00000188500 906 ntBASIC5.11□□□□□ -1.59
Scn1aA2APX8 4930540E01Rik-201ENSMUST00000192569 1146 ntBASIC5.11□□□□□ -1.59
Scn1aA2APX8 Gm2622-201ENSMUST00000200018 471 ntBASIC5.11□□□□□ -1.59
Scn1aA2APX8 Gm20586-201ENSMUST00000210122 547 ntBASIC5.11□□□□□ -1.59
Scn1aA2APX8 AC132384.6-201ENSMUST00000218976 1206 ntBASIC5.11□□□□□ -1.59
Scn1aA2APX8 Selenok-ps6-201ENSMUST00000221812 283 ntBASIC5.11□□□□□ -1.59
Scn1aA2APX8 1700057G04Rik-201ENSMUST00000098477 1052 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Scn1aA2APX8 Gm14399-201ENSMUST00000099029 192 ntTSL 5 BASIC5.11□□□□□ -1.59
Scn1aA2APX8 Olfr1275-201ENSMUST00000099620 1020 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Scn1aA2APX8 Vmn1r201-202ENSMUST00000226330 4770 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Scn1aA2APX8 Gm44518-201ENSMUST00000208080 4370 ntBASIC5.11□□□□□ -1.59
Scn1aA2APX8 Olfr1385-202ENSMUST00000214948 4412 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Scn1aA2APX8 Zfp287-201ENSMUST00000005399 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Scn1aA2APX8 Gm1966-201ENSMUST00000184540 7293 ntBASIC5.11□□□□□ -1.59
Scn1aA2APX8 Grik1-203ENSMUST00000114137 2894 ntTSL 5 BASIC5.11□□□□□ -1.59
Scn1aA2APX8 Il2ra-201ENSMUST00000028111 4412 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Scn1aA2APX8 Gm11867-201ENSMUST00000133363 1909 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Scn1aA2APX8 Ascc3-206ENSMUST00000219226 1357 ntTSL 5 BASIC5.11□□□□□ -1.59
Scn1aA2APX8 Rnf2-204ENSMUST00000187048 3201 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Scn1aA2APX8 4930444P10Rik-201ENSMUST00000115367 868 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
Scn1aA2APX8 Gm13033-201ENSMUST00000117591 1057 ntBASIC5.11□□□□□ -1.59
Scn1aA2APX8 Gm14706-201ENSMUST00000117744 255 ntBASIC5.11□□□□□ -1.59
Scn1aA2APX8 Gm12704-201ENSMUST00000119789 464 ntBASIC5.11□□□□□ -1.59
Scn1aA2APX8 Gm12583-201ENSMUST00000120677 853 ntBASIC5.11□□□□□ -1.59
Scn1aA2APX8 Gm15786-201ENSMUST00000121079 450 ntBASIC5.11□□□□□ -1.59
Scn1aA2APX8 Gm13147-201ENSMUST00000125785 585 ntTSL 2 BASIC5.11□□□□□ -1.59
Scn1aA2APX8 2310043L19Rik-201ENSMUST00000189507 698 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Scn1aA2APX8 Gm28078-201ENSMUST00000190381 874 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Scn1aA2APX8 Gm38046-201ENSMUST00000192733 550 ntBASIC5.11□□□□□ -1.59
Scn1aA2APX8 Gm42720-201ENSMUST00000196813 300 ntBASIC5.11□□□□□ -1.59
Scn1aA2APX8 Gm32536-201ENSMUST00000205209 445 ntBASIC5.11□□□□□ -1.59
Scn1aA2APX8 Gm45228-201ENSMUST00000206585 352 ntBASIC5.11□□□□□ -1.59
Scn1aA2APX8 Gm7822-201ENSMUST00000222433 581 ntBASIC5.11□□□□□ -1.59
Scn1aA2APX8 AC161252.2-201ENSMUST00000224978 374 ntBASIC5.11□□□□□ -1.59
Scn1aA2APX8 AC121137.1-201ENSMUST00000225272 602 ntBASIC5.11□□□□□ -1.59
Scn1aA2APX8 Olfr1200-201ENSMUST00000099811 1011 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Scn1aA2APX8 Ccr2-204ENSMUST00000171719 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Scn1aA2APX8 Olfr1302-202ENSMUST00000214708 2461 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
Scn1aA2APX8 Vmn2r89-201ENSMUST00000159611 2942 ntAPPRIS P4 TSL 1 (best) BASIC5.1□□□□□ -1.59
Scn1aA2APX8 Gm44751-201ENSMUST00000208302 4387 ntBASIC5.1□□□□□ -1.59
Scn1aA2APX8 Olfr427-202ENSMUST00000213832 3866 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Scn1aA2APX8 Cep57l1-201ENSMUST00000019951 2177 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
Scn1aA2APX8 Ifit2-201ENSMUST00000102826 3818 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Scn1aA2APX8 Cc2d2b-205ENSMUST00000224596 4762 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Scn1aA2APX8 Sirpb1a-201ENSMUST00000099201 1419 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
Scn1aA2APX8 Macc1-202ENSMUST00000221866 6937 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Scn1aA2APX8 Gm45222-201ENSMUST00000207029 4307 ntBASIC5.1□□□□□ -1.59
Scn1aA2APX8 Gm21955-201ENSMUST00000194137 4968 ntBASIC5.1□□□□□ -1.59
Scn1aA2APX8 Gm13195-201ENSMUST00000117229 261 ntBASIC5.1□□□□□ -1.59
Scn1aA2APX8 Gm15340-201ENSMUST00000144984 704 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Scn1aA2APX8 Smdt1-202ENSMUST00000159054 294 ntTSL 5 BASIC5.1□□□□□ -1.59
Scn1aA2APX8 Gm15796-201ENSMUST00000162135 204 ntBASIC5.1□□□□□ -1.59
Scn1aA2APX8 Obox4-ps14-201ENSMUST00000177198 1127 ntBASIC5.1□□□□□ -1.59
Scn1aA2APX8 1700031M16Rik-204ENSMUST00000189724 824 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
Scn1aA2APX8 1700031M16Rik-207ENSMUST00000191513 847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
Scn1aA2APX8 4833421G17Rik-201ENSMUST00000191704 844 ntBASIC5.1□□□□□ -1.59
Scn1aA2APX8 Olfr416-ps1-201ENSMUST00000192734 804 ntBASIC5.1□□□□□ -1.59
Scn1aA2APX8 Gm37908-201ENSMUST00000195828 470 ntBASIC5.1□□□□□ -1.59
Scn1aA2APX8 Rnu3a-202ENSMUST00000196710 213 ntBASIC5.1□□□□□ -1.59
Scn1aA2APX8 Olfr540-ps1-201ENSMUST00000210499 612 ntBASIC5.1□□□□□ -1.59
Scn1aA2APX8 Gm7045-201ENSMUST00000221466 605 ntBASIC5.1□□□□□ -1.59
Scn1aA2APX8 AC121804.2-201ENSMUST00000222531 316 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Scn1aA2APX8 AC102542.1-201ENSMUST00000225204 1138 ntBASIC5.1□□□□□ -1.59
Scn1aA2APX8 Rnu3a-201ENSMUST00000083936 214 ntBASIC5.1□□□□□ -1.59
Scn1aA2APX8 Entpd1-201ENSMUST00000112231 4221 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
Scn1aA2APX8 Hmmr-201ENSMUST00000020579 3892 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Scn1aA2APX8 Gm20826-202ENSMUST00000185348 4605 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Scn1aA2APX8 Gm15189-201ENSMUST00000121164 1966 ntBASIC5.1□□□□□ -1.59
Scn1aA2APX8 Kmt2d-202ENSMUST00000178486 19805 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
Scn1aA2APX8 Olfr1122-202ENSMUST00000215371 5036 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Scn1aA2APX8 Gm37226-201ENSMUST00000191644 3255 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms