Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 1700061J23Rik-201ENSMUST00000141678 537 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Trim3Q9R1R2 Atxn3-204ENSMUST00000160251 998 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Trim3Q9R1R2 Gm5849-201ENSMUST00000180151 351 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
Trim3Q9R1R2 Tceanc-203ENSMUST00000180322 1080 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Trim3Q9R1R2 D530049I02Rik-201ENSMUST00000186582 562 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Trim3Q9R1R2 Gm37682-201ENSMUST00000191776 522 ntBASIC4.89□□□□□ -1.63
Trim3Q9R1R2 Igkv4-56-201ENSMUST00000198436 349 ntBASIC4.89□□□□□ -1.63
Trim3Q9R1R2 Gm33758-201ENSMUST00000199230 407 ntTSL 3 BASIC4.89□□□□□ -1.63
Trim3Q9R1R2 Olfr1311-201ENSMUST00000208536 943 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Trim3Q9R1R2 Gm45422-201ENSMUST00000211476 246 ntBASIC4.89□□□□□ -1.63
Trim3Q9R1R2 Gm4263-201ENSMUST00000220693 1101 ntBASIC4.89□□□□□ -1.63
Trim3Q9R1R2 AL807824.1-201ENSMUST00000223151 183 ntBASIC4.89□□□□□ -1.63
Trim3Q9R1R2 AC164315.1-201ENSMUST00000226452 708 ntBASIC4.89□□□□□ -1.63
Trim3Q9R1R2 Mir337-201ENSMUST00000083592 97 ntBASIC4.89□□□□□ -1.63
Trim3Q9R1R2 Wdr64-201ENSMUST00000094288 3817 ntAPPRIS P2 TSL 5 BASIC4.89□□□□□ -1.63
Trim3Q9R1R2 Olfr1314-201ENSMUST00000099598 939 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Trim3Q9R1R2 Olfr1383-202ENSMUST00000204706 4168 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
Trim3Q9R1R2 Gm11674-201ENSMUST00000124855 3005 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Trim3Q9R1R2 CT025556.1-201ENSMUST00000222965 1884 ntBASIC4.89□□□□□ -1.63
Trim3Q9R1R2 BB019430-202ENSMUST00000218015 1320 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Trim3Q9R1R2 Glcci1-206ENSMUST00000162567 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
Trim3Q9R1R2 Gm19301-201ENSMUST00000174283 2210 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Trim3Q9R1R2 Olfr473-202ENSMUST00000217618 2319 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
Trim3Q9R1R2 Gm31258-201ENSMUST00000194532 3297 ntBASIC4.89□□□□□ -1.63
Trim3Q9R1R2 Ptprd-217ENSMUST00000174023 4530 ntTSL 5 BASIC4.89□□□□□ -1.63
Trim3Q9R1R2 Angpt1-201ENSMUST00000022921 4260 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Trim3Q9R1R2 Vmn2r1-201ENSMUST00000029406 2739 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Trim3Q9R1R2 Cntnap5b-201ENSMUST00000086738 4027 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
Trim3Q9R1R2 Epha7-201ENSMUST00000029964 6746 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
Trim3Q9R1R2 Gm26582-201ENSMUST00000181481 3135 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Trim3Q9R1R2 Cnga1-205ENSMUST00000201463 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Trim3Q9R1R2 Cyp4a31-202ENSMUST00000030486 2509 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Trim3Q9R1R2 Ttc29-203ENSMUST00000117845 650 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Trim3Q9R1R2 Gm11975-201ENSMUST00000118772 481 ntBASIC4.88□□□□□ -1.63
Trim3Q9R1R2 Hbb-bh3-201ENSMUST00000118954 266 ntBASIC4.88□□□□□ -1.63
Trim3Q9R1R2 Gm15803-201ENSMUST00000120118 394 ntBASIC4.88□□□□□ -1.63
Trim3Q9R1R2 Gm13488-201ENSMUST00000120419 179 ntBASIC4.88□□□□□ -1.63
Trim3Q9R1R2 Olfr1118-201ENSMUST00000121296 996 ntAPPRIS P2 BASIC4.88□□□□□ -1.63
Trim3Q9R1R2 Prdx6-ps2-201ENSMUST00000121989 694 ntBASIC4.88□□□□□ -1.63
Trim3Q9R1R2 Gm15868-201ENSMUST00000144291 520 ntTSL 5 BASIC4.88□□□□□ -1.63
Trim3Q9R1R2 Gm11197-201ENSMUST00000145158 839 ntBASIC4.88□□□□□ -1.63
Trim3Q9R1R2 Scarna13-201ENSMUST00000158164 275 ntBASIC4.88□□□□□ -1.63
Trim3Q9R1R2 Hsd11b1-203ENSMUST00000160929 1256 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
Trim3Q9R1R2 Gm20647-201ENSMUST00000176396 857 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Trim3Q9R1R2 Gm21909-201ENSMUST00000178260 439 ntBASIC4.88□□□□□ -1.63
Trim3Q9R1R2 Mir7222-201ENSMUST00000183740 75 ntBASIC4.88□□□□□ -1.63
Trim3Q9R1R2 1700015G11Rik-202ENSMUST00000185758 366 ntAPPRIS ALT2 TSL 3 BASIC4.88□□□□□ -1.63
Trim3Q9R1R2 Gm28863-201ENSMUST00000186888 431 ntTSL 3 BASIC4.88□□□□□ -1.63
Trim3Q9R1R2 2310043L19Rik-201ENSMUST00000189507 698 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Trim3Q9R1R2 Gm37640-201ENSMUST00000195407 300 ntTSL 3 BASIC4.88□□□□□ -1.63
Trim3Q9R1R2 2900002M20Rik-201ENSMUST00000195754 330 ntBASIC4.88□□□□□ -1.63
Trim3Q9R1R2 Gm42663-201ENSMUST00000199883 351 ntBASIC4.88□□□□□ -1.63
Trim3Q9R1R2 Gm45686-202ENSMUST00000211580 1138 ntTSL 5 BASIC4.88□□□□□ -1.63
Trim3Q9R1R2 AC153800.1-201ENSMUST00000219212 365 ntBASIC4.88□□□□□ -1.63
Trim3Q9R1R2 AC155808.1-201ENSMUST00000219288 409 ntBASIC4.88□□□□□ -1.63
Trim3Q9R1R2 AC164629.3-201ENSMUST00000219325 611 ntTSL 5 BASIC4.88□□□□□ -1.63
Trim3Q9R1R2 AC132433.1-201ENSMUST00000221553 1101 ntBASIC4.88□□□□□ -1.63
Trim3Q9R1R2 Gm6474-201ENSMUST00000223250 699 ntBASIC4.88□□□□□ -1.63
Trim3Q9R1R2 CT025552.1-201ENSMUST00000224561 521 ntBASIC4.88□□□□□ -1.63
Trim3Q9R1R2 AC154806.4-201ENSMUST00000227406 439 ntBASIC4.88□□□□□ -1.63
Trim3Q9R1R2 Ms4a2-201ENSMUST00000025583 1211 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Trim3Q9R1R2 Prl3b1-201ENSMUST00000035273 879 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Trim3Q9R1R2 Rpl21-ps13-201ENSMUST00000072532 483 ntBASIC4.88□□□□□ -1.63
Trim3Q9R1R2 Olfr229-201ENSMUST00000076802 924 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Trim3Q9R1R2 Gm23508-201ENSMUST00000083079 72 ntBASIC4.88□□□□□ -1.63
Trim3Q9R1R2 Olfr1054-201ENSMUST00000099895 939 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Trim3Q9R1R2 Vmn2r-ps120-201ENSMUST00000176341 2409 ntBASIC4.88□□□□□ -1.63
Trim3Q9R1R2 Brip1-201ENSMUST00000044423 6931 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Trim3Q9R1R2 Ctsq-201ENSMUST00000021888 1378 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Trim3Q9R1R2 AC115970.1-201ENSMUST00000218910 1758 ntBASIC4.88□□□□□ -1.63
Trim3Q9R1R2 Pnpla8-204ENSMUST00000143771 2974 ntTSL 5 BASIC4.88□□□□□ -1.63
Trim3Q9R1R2 Olfr198-202ENSMUST00000208244 2200 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
Trim3Q9R1R2 Gm38253-201ENSMUST00000194058 4678 ntBASIC4.88□□□□□ -1.63
Trim3Q9R1R2 Btf3l4-204ENSMUST00000102742 3141 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Trim3Q9R1R2 Kynu-201ENSMUST00000028223 2733 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Trim3Q9R1R2 Abcg2-201ENSMUST00000031822 5717 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Trim3Q9R1R2 Gm15581-201ENSMUST00000131334 5640 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Trim3Q9R1R2 AC168056.3-201ENSMUST00000225395 2540 ntBASIC4.87□□□□□ -1.63
Trim3Q9R1R2 Olfr690-203ENSMUST00000216230 2085 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Trim3Q9R1R2 Zfp950-207ENSMUST00000180544 2568 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
Trim3Q9R1R2 Olfr716-206ENSMUST00000215284 3515 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Trim3Q9R1R2 Slamf7-201ENSMUST00000111276 1082 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
Trim3Q9R1R2 Gm13755-201ENSMUST00000118509 305 ntBASIC4.87□□□□□ -1.63
Trim3Q9R1R2 Ogt-202ENSMUST00000119299 3840 ntAPPRIS ALT1 TSL 5 BASIC4.87□□□□□ -1.63
Trim3Q9R1R2 Gm13367-201ENSMUST00000119955 796 ntBASIC4.87□□□□□ -1.63
Trim3Q9R1R2 Gm6305-201ENSMUST00000121027 1012 ntBASIC4.87□□□□□ -1.63
Trim3Q9R1R2 Gm25843-201ENSMUST00000122582 314 ntBASIC4.87□□□□□ -1.63
Trim3Q9R1R2 Gm12256-201ENSMUST00000132394 446 ntTSL 3 BASIC4.87□□□□□ -1.63
Trim3Q9R1R2 Gm14223-201ENSMUST00000146060 517 ntTSL 3 BASIC4.87□□□□□ -1.63
Trim3Q9R1R2 Gm11680-201ENSMUST00000146550 439 ntTSL 5 BASIC4.87□□□□□ -1.63
Trim3Q9R1R2 Gm25824-201ENSMUST00000157092 121 ntBASIC4.87□□□□□ -1.63
Trim3Q9R1R2 Gm26350-201ENSMUST00000157531 288 ntBASIC4.87□□□□□ -1.63
Trim3Q9R1R2 Gm23121-201ENSMUST00000157653 173 ntBASIC4.87□□□□□ -1.63
Trim3Q9R1R2 Gm7609-204ENSMUST00000161424 461 ntBASIC4.87□□□□□ -1.63
Trim3Q9R1R2 Skint1-204ENSMUST00000162158 1260 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Trim3Q9R1R2 Vmn1r10-201ENSMUST00000176073 936 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Trim3Q9R1R2 Gm4791-201ENSMUST00000178065 1021 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Trim3Q9R1R2 Gm27541-201ENSMUST00000184078 122 ntBASIC4.87□□□□□ -1.63
Trim3Q9R1R2 Gm28683-201ENSMUST00000187134 615 ntBASIC4.87□□□□□ -1.63
Trim3Q9R1R2 Gm28840-205ENSMUST00000189320 615 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms