Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Gm43426-201ENSMUST00000197287 2597 ntBASIC5.3□□□□□ -1.56
Sf3a3Q9D554 Olfr403-202ENSMUST00000206114 3444 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
Sf3a3Q9D554 AC122357.1-201ENSMUST00000221652 1515 ntBASIC5.3□□□□□ -1.56
Sf3a3Q9D554 Ccdc7a-201ENSMUST00000095158 1547 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
Sf3a3Q9D554 Mir683-2-201ENSMUST00000102099 109 ntBASIC5.3□□□□□ -1.56
Sf3a3Q9D554 Gm12077-201ENSMUST00000117049 364 ntBASIC5.3□□□□□ -1.56
Sf3a3Q9D554 Gm2003-201ENSMUST00000118537 636 ntBASIC5.3□□□□□ -1.56
Sf3a3Q9D554 Gm11708-201ENSMUST00000119530 832 ntBASIC5.3□□□□□ -1.56
Sf3a3Q9D554 Gm15828-201ENSMUST00000119911 522 ntBASIC5.3□□□□□ -1.56
Sf3a3Q9D554 Gm13367-201ENSMUST00000119955 796 ntBASIC5.3□□□□□ -1.56
Sf3a3Q9D554 Gm7931-201ENSMUST00000121537 271 ntBASIC5.3□□□□□ -1.56
Sf3a3Q9D554 Klra17-202ENSMUST00000122219 1167 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Sf3a3Q9D554 4930419G24Rik-201ENSMUST00000125494 1058 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Sf3a3Q9D554 Gm1989-201ENSMUST00000126244 636 ntBASIC5.3□□□□□ -1.56
Sf3a3Q9D554 Gm14582-201ENSMUST00000141697 1189 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Sf3a3Q9D554 Gm22817-201ENSMUST00000157448 356 ntBASIC5.3□□□□□ -1.56
Sf3a3Q9D554 Gm22804-201ENSMUST00000158052 101 ntBASIC5.3□□□□□ -1.56
Sf3a3Q9D554 Serpina3e-ps-201ENSMUST00000165968 1228 ntBASIC5.3□□□□□ -1.56
Sf3a3Q9D554 Mup7-203ENSMUST00000166098 1033 ntAPPRIS P3 TSL 5 BASIC5.3□□□□□ -1.56
Sf3a3Q9D554 Obox2-202ENSMUST00000172478 818 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Sf3a3Q9D554 Gm20519-201ENSMUST00000173684 359 ntBASIC5.3□□□□□ -1.56
Sf3a3Q9D554 Obox3-ps1-201ENSMUST00000176885 995 ntBASIC5.3□□□□□ -1.56
Sf3a3Q9D554 Mir683-1-201ENSMUST00000179371 109 ntBASIC5.3□□□□□ -1.56
Sf3a3Q9D554 Gm26910-201ENSMUST00000180450 698 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Sf3a3Q9D554 Gm3428-201ENSMUST00000183450 521 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Sf3a3Q9D554 Gm29093-201ENSMUST00000187366 409 ntTSL 5 BASIC5.3□□□□□ -1.56
Sf3a3Q9D554 Gm29467-202ENSMUST00000189669 935 ntTSL 5 BASIC5.3□□□□□ -1.56
Sf3a3Q9D554 1700031M16Rik-205ENSMUST00000189907 969 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Sf3a3Q9D554 Scgb2b5-ps-201ENSMUST00000190227 270 ntBASIC5.3□□□□□ -1.56
Sf3a3Q9D554 Gm38011-201ENSMUST00000193312 279 ntBASIC5.3□□□□□ -1.56
Sf3a3Q9D554 Gm37659-201ENSMUST00000194574 111 ntBASIC5.3□□□□□ -1.56
Sf3a3Q9D554 4930520M14Rik-201ENSMUST00000196947 701 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Sf3a3Q9D554 Gm33758-201ENSMUST00000199230 407 ntTSL 3 BASIC5.3□□□□□ -1.56
Sf3a3Q9D554 Gm44110-201ENSMUST00000203871 475 ntTSL 2 BASIC5.3□□□□□ -1.56
Sf3a3Q9D554 Gm44538-201ENSMUST00000205615 348 ntBASIC5.3□□□□□ -1.56
Sf3a3Q9D554 Gm6145-203ENSMUST00000210557 835 ntTSL 5 BASIC5.3□□□□□ -1.56
Sf3a3Q9D554 Gm7351-201ENSMUST00000210745 580 ntBASIC5.3□□□□□ -1.56
Sf3a3Q9D554 Gm32975-201ENSMUST00000211651 584 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Sf3a3Q9D554 AC112680.2-201ENSMUST00000213119 595 ntBASIC5.3□□□□□ -1.56
Sf3a3Q9D554 AL929265.1-201ENSMUST00000213427 125 ntBASIC5.3□□□□□ -1.56
Sf3a3Q9D554 AL929285.1-201ENSMUST00000215522 229 ntBASIC5.3□□□□□ -1.56
Sf3a3Q9D554 AC151843.1-201ENSMUST00000215960 691 ntBASIC5.3□□□□□ -1.56
Sf3a3Q9D554 AC163621.1-201ENSMUST00000220695 379 ntBASIC5.3□□□□□ -1.56
Sf3a3Q9D554 Gm36262-201ENSMUST00000223274 499 ntBASIC5.3□□□□□ -1.56
Sf3a3Q9D554 AC154627.3-201ENSMUST00000228441 334 ntBASIC5.3□□□□□ -1.56
Sf3a3Q9D554 Klre1-201ENSMUST00000053708 1294 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Sf3a3Q9D554 Vmn1r215-201ENSMUST00000072972 1048 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Sf3a3Q9D554 Zfp353-ps-201ENSMUST00000107130 1650 ntBASIC5.3□□□□□ -1.56
Sf3a3Q9D554 Gm14295-202ENSMUST00000132883 2505 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Sf3a3Q9D554 AC149294.7-201ENSMUST00000227475 1432 ntBASIC5.3□□□□□ -1.56
Sf3a3Q9D554 Gm39043-201ENSMUST00000207602 2081 ntTSL 5 BASIC5.3□□□□□ -1.56
Sf3a3Q9D554 Gm10635-201ENSMUST00000217201 3721 ntTSL 2 BASIC5.3□□□□□ -1.56
Sf3a3Q9D554 Stau2-213ENSMUST00000159558 3901 ntTSL 5 BASIC5.29□□□□□ -1.56
Sf3a3Q9D554 Vmn1r173-202ENSMUST00000226233 9416 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Sf3a3Q9D554 Rgsl1-201ENSMUST00000124558 3642 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Sf3a3Q9D554 Wnk3-206ENSMUST00000184730 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Sf3a3Q9D554 Gm37250-201ENSMUST00000194919 2388 ntBASIC5.29□□□□□ -1.56
Sf3a3Q9D554 Gm44248-201ENSMUST00000203079 1549 ntBASIC5.29□□□□□ -1.56
Sf3a3Q9D554 Olfr491-202ENSMUST00000209545 1944 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Sf3a3Q9D554 Vmn1r32-202ENSMUST00000227014 2661 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Sf3a3Q9D554 Gm25595-201ENSMUST00000102273 97 ntBASIC5.29□□□□□ -1.56
Sf3a3Q9D554 Igkv12-44-201ENSMUST00000103367 401 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Sf3a3Q9D554 n-R5s178-201ENSMUST00000104249 114 ntBASIC5.29□□□□□ -1.56
Sf3a3Q9D554 Mir879-201ENSMUST00000104703 76 ntBASIC5.29□□□□□ -1.56
Sf3a3Q9D554 Gm16053-201ENSMUST00000120511 188 ntBASIC5.29□□□□□ -1.56
Sf3a3Q9D554 Tex35-204ENSMUST00000121911 805 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
Sf3a3Q9D554 Gm14800-201ENSMUST00000122084 1272 ntBASIC5.29□□□□□ -1.56
Sf3a3Q9D554 Crem-207ENSMUST00000126578 915 ntTSL 5 BASIC5.29□□□□□ -1.56
Sf3a3Q9D554 2010013B24Rik-201ENSMUST00000126922 747 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Sf3a3Q9D554 1700095A21Rik-201ENSMUST00000145269 1069 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Sf3a3Q9D554 Gm22818-201ENSMUST00000157446 104 ntBASIC5.29□□□□□ -1.56
Sf3a3Q9D554 Gm25227-201ENSMUST00000158204 112 ntBASIC5.29□□□□□ -1.56
Sf3a3Q9D554 Gm24767-201ENSMUST00000158509 95 ntBASIC5.29□□□□□ -1.56
Sf3a3Q9D554 Gm23205-201ENSMUST00000158671 103 ntBASIC5.29□□□□□ -1.56
Sf3a3Q9D554 Gm15647-201ENSMUST00000160178 691 ntTSL 3 BASIC5.29□□□□□ -1.56
Sf3a3Q9D554 Gm9006-201ENSMUST00000165520 841 ntBASIC5.29□□□□□ -1.56
Sf3a3Q9D554 Gm17023-201ENSMUST00000165885 448 ntTSL 2 BASIC5.29□□□□□ -1.56
Sf3a3Q9D554 Gm42421-201ENSMUST00000172367 719 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
Sf3a3Q9D554 Pafah1b1-ps1-201ENSMUST00000181263 1046 ntBASIC5.29□□□□□ -1.56
Sf3a3Q9D554 Gm7745-201ENSMUST00000182235 973 ntBASIC5.29□□□□□ -1.56
Sf3a3Q9D554 Sbp-203ENSMUST00000182519 368 ntTSL 2 BASIC5.29□□□□□ -1.56
Sf3a3Q9D554 Gm29286-202ENSMUST00000187736 537 ntTSL 5 BASIC5.29□□□□□ -1.56
Sf3a3Q9D554 Gm28987-201ENSMUST00000191071 537 ntTSL 5 BASIC5.29□□□□□ -1.56
Sf3a3Q9D554 Gm6631-201ENSMUST00000193699 559 ntBASIC5.29□□□□□ -1.56
Sf3a3Q9D554 Gm38172-201ENSMUST00000195321 567 ntTSL 5 BASIC5.29□□□□□ -1.56
Sf3a3Q9D554 Gm43233-201ENSMUST00000200491 616 ntBASIC5.29□□□□□ -1.56
Sf3a3Q9D554 Gm44074-201ENSMUST00000204562 337 ntBASIC5.29□□□□□ -1.56
Sf3a3Q9D554 Bsph1-202ENSMUST00000204715 707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Sf3a3Q9D554 1600020E01Rik-208ENSMUST00000205028 329 ntTSL 5 BASIC5.29□□□□□ -1.56
Sf3a3Q9D554 Gm19033-201ENSMUST00000208516 964 ntBASIC5.29□□□□□ -1.56
Sf3a3Q9D554 E230029C05Rik-206ENSMUST00000208547 814 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Sf3a3Q9D554 Gm45524-201ENSMUST00000211374 1250 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Sf3a3Q9D554 Gm17999-201ENSMUST00000211568 542 ntBASIC5.29□□□□□ -1.56
Sf3a3Q9D554 Spata19-204ENSMUST00000214287 642 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Sf3a3Q9D554 Rpl17-ps2-201ENSMUST00000218101 532 ntBASIC5.29□□□□□ -1.56
Sf3a3Q9D554 Gm40418-201ENSMUST00000218806 1013 ntTSL 5 BASIC5.29□□□□□ -1.56
Sf3a3Q9D554 Gm4012-201ENSMUST00000221504 581 ntBASIC5.29□□□□□ -1.56
Sf3a3Q9D554 AC174082.2-201ENSMUST00000222094 543 ntBASIC5.29□□□□□ -1.56
Sf3a3Q9D554 AC153794.2-201ENSMUST00000222650 550 ntBASIC5.29□□□□□ -1.56
Sf3a3Q9D554 AC153646.1-201ENSMUST00000223229 1279 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 79.3 ms