Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm20667-201ENSMUST00000175674 1930 ntBASIC5.83□□□□□ -1.48
Smc1aQ9CU62 Olfr506-202ENSMUST00000209296 3228 ntAPPRIS P1 TSL 3 BASIC5.83□□□□□ -1.48
Smc1aQ9CU62 Vmn2r88-204ENSMUST00000228139 3227 ntAPPRIS ALT2 BASIC5.83□□□□□ -1.48
Smc1aQ9CU62 Cnga1-205ENSMUST00000201463 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Smc1aQ9CU62 Gm44000-201ENSMUST00000205038 1478 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Smc1aQ9CU62 Gm15638-201ENSMUST00000128159 2062 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Smc1aQ9CU62 Rbm46os-201ENSMUST00000131274 3261 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Smc1aQ9CU62 Pum2-201ENSMUST00000020915 3587 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Smc1aQ9CU62 Gm37760-201ENSMUST00000194726 3841 ntBASIC5.82□□□□□ -1.48
Smc1aQ9CU62 Vmn2r117-201ENSMUST00000171996 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Smc1aQ9CU62 Olfr1195-202ENSMUST00000213545 2585 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Smc1aQ9CU62 LOC102637012-201ENSMUST00000217248 2562 ntBASIC5.82□□□□□ -1.48
Smc1aQ9CU62 A330087D11Rik-201ENSMUST00000187265 1334 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Smc1aQ9CU62 Ccnb3-201ENSMUST00000056725 4475 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Smc1aQ9CU62 Gm10933-201ENSMUST00000221891 1861 ntBASIC5.82□□□□□ -1.48
Smc1aQ9CU62 Rgs2-202ENSMUST00000127206 3021 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Smc1aQ9CU62 Gm12245-201ENSMUST00000117266 357 ntBASIC5.82□□□□□ -1.48
Smc1aQ9CU62 Gm15493-201ENSMUST00000119461 528 ntBASIC5.82□□□□□ -1.48
Smc1aQ9CU62 Gm12287-201ENSMUST00000119770 707 ntBASIC5.82□□□□□ -1.48
Smc1aQ9CU62 Gm23211-201ENSMUST00000122717 308 ntBASIC5.82□□□□□ -1.48
Smc1aQ9CU62 G630016G05Rik-201ENSMUST00000152412 796 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Smc1aQ9CU62 1700116B05Rik-201ENSMUST00000173461 414 ntTSL 2 BASIC5.82□□□□□ -1.48
Smc1aQ9CU62 Gm28083-201ENSMUST00000186533 538 ntTSL 5 BASIC5.82□□□□□ -1.48
Smc1aQ9CU62 Gm18177-201ENSMUST00000188373 404 ntBASIC5.82□□□□□ -1.48
Smc1aQ9CU62 Gm37444-201ENSMUST00000193605 439 ntBASIC5.82□□□□□ -1.48
Smc1aQ9CU62 Gm19057-201ENSMUST00000194329 1197 ntBASIC5.82□□□□□ -1.48
Smc1aQ9CU62 Gm43044-201ENSMUST00000198091 379 ntBASIC5.82□□□□□ -1.48
Smc1aQ9CU62 Gm45700-201ENSMUST00000205866 347 ntBASIC5.82□□□□□ -1.48
Smc1aQ9CU62 Gm44580-201ENSMUST00000206333 877 ntBASIC5.82□□□□□ -1.48
Smc1aQ9CU62 Lrrc72-201ENSMUST00000020853 660 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Smc1aQ9CU62 Olfr1115-204ENSMUST00000217196 2109 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
Smc1aQ9CU62 AC163721.1-201ENSMUST00000222669 394 ntTSL 3 BASIC5.82□□□□□ -1.48
Smc1aQ9CU62 Mucl2-202ENSMUST00000226584 823 ntAPPRIS ALT2 BASIC5.82□□□□□ -1.48
Smc1aQ9CU62 Vmn1r177-201ENSMUST00000073967 930 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Smc1aQ9CU62 Olfr1145-201ENSMUST00000079711 945 ntAPPRIS ALT2 BASIC5.82□□□□□ -1.48
Smc1aQ9CU62 Gm23514-201ENSMUST00000082827 130 ntBASIC5.82□□□□□ -1.48
Smc1aQ9CU62 H2-M9-201ENSMUST00000087165 1125 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Smc1aQ9CU62 Olfr1145-202ENSMUST00000090707 978 ntAPPRIS P2 BASIC5.82□□□□□ -1.48
Smc1aQ9CU62 4932411K12Rik-201ENSMUST00000190493 3156 ntTSL 2 BASIC5.82□□□□□ -1.48
Smc1aQ9CU62 Mdn1-201ENSMUST00000071642 17970 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
Smc1aQ9CU62 Acer3-201ENSMUST00000033020 11340 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Smc1aQ9CU62 Fign-203ENSMUST00000131615 9734 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Smc1aQ9CU62 5430403G16Rik-201ENSMUST00000092720 3341 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Smc1aQ9CU62 Gm15189-201ENSMUST00000121164 1966 ntBASIC5.82□□□□□ -1.48
Smc1aQ9CU62 Abcg3-201ENSMUST00000031239 3035 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Smc1aQ9CU62 Ncoa7-203ENSMUST00000213836 2989 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Smc1aQ9CU62 Snhg14-214ENSMUST00000191191 3991 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Smc1aQ9CU62 Cep57l1-201ENSMUST00000019951 2177 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
Smc1aQ9CU62 Olfr1428-202ENSMUST00000208391 1368 ntTSL 3 BASIC5.81□□□□□ -1.48
Smc1aQ9CU62 Vmn2r39-201ENSMUST00000174388 3577 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Smc1aQ9CU62 Gm44624-201ENSMUST00000208700 2278 ntBASIC5.81□□□□□ -1.48
Smc1aQ9CU62 Slc10a2-201ENSMUST00000023835 4152 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Smc1aQ9CU62 Nlrp4g-201ENSMUST00000067621 2030 ntBASIC5.81□□□□□ -1.48
Smc1aQ9CU62 Hbb-bh2-201ENSMUST00000106866 558 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Smc1aQ9CU62 Cetn2-202ENSMUST00000114550 1124 ntTSL 3 BASIC5.81□□□□□ -1.48
Smc1aQ9CU62 Cypt1-202ENSMUST00000115422 661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Smc1aQ9CU62 Gm9427-201ENSMUST00000116187 651 ntBASIC5.81□□□□□ -1.48
Smc1aQ9CU62 Spin2-ps1-201ENSMUST00000116643 875 ntBASIC5.81□□□□□ -1.48
Smc1aQ9CU62 H3f3c-201ENSMUST00000119459 411 ntBASIC5.81□□□□□ -1.48
Smc1aQ9CU62 Gm11866-201ENSMUST00000120209 335 ntBASIC5.81□□□□□ -1.48
Smc1aQ9CU62 Gm3757-201ENSMUST00000125878 675 ntBASIC5.81□□□□□ -1.48
Smc1aQ9CU62 Gm12701-201ENSMUST00000134206 659 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Smc1aQ9CU62 Hnf1aos2-201ENSMUST00000138108 442 ntTSL 3 BASIC5.81□□□□□ -1.48
Smc1aQ9CU62 Ctla2b-202ENSMUST00000171347 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Smc1aQ9CU62 Olfr753-ps1-202ENSMUST00000174673 919 ntBASIC5.81□□□□□ -1.48
Smc1aQ9CU62 Spin2-ps6-201ENSMUST00000178459 525 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Smc1aQ9CU62 Gm28967-201ENSMUST00000187351 281 ntBASIC5.81□□□□□ -1.48
Smc1aQ9CU62 Gm21803-201ENSMUST00000188897 693 ntBASIC5.81□□□□□ -1.48
Smc1aQ9CU62 Gm28567-201ENSMUST00000190270 693 ntBASIC5.81□□□□□ -1.48
Smc1aQ9CU62 Gm18183-201ENSMUST00000191024 615 ntBASIC5.81□□□□□ -1.48
Smc1aQ9CU62 Gm37996-201ENSMUST00000191859 367 ntBASIC5.81□□□□□ -1.48
Smc1aQ9CU62 Gm37381-201ENSMUST00000192427 899 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Smc1aQ9CU62 Gm37044-201ENSMUST00000193531 693 ntBASIC5.81□□□□□ -1.48
Smc1aQ9CU62 Gm37215-201ENSMUST00000194927 1259 ntBASIC5.81□□□□□ -1.48
Smc1aQ9CU62 9430092D12Rik-201ENSMUST00000194937 1274 ntBASIC5.81□□□□□ -1.48
Smc1aQ9CU62 Gm38369-201ENSMUST00000195101 693 ntBASIC5.81□□□□□ -1.48
Smc1aQ9CU62 Gm2053-201ENSMUST00000195671 631 ntBASIC5.81□□□□□ -1.48
Smc1aQ9CU62 Gm8861-201ENSMUST00000196346 832 ntBASIC5.81□□□□□ -1.48
Smc1aQ9CU62 Gm42952-201ENSMUST00000196393 731 ntTSL 2 BASIC5.81□□□□□ -1.48
Smc1aQ9CU62 Olfr1092-ps1-201ENSMUST00000216544 398 ntBASIC5.81□□□□□ -1.48
Smc1aQ9CU62 Gm46102-201ENSMUST00000217005 731 ntTSL 5 BASIC5.81□□□□□ -1.48
Smc1aQ9CU62 Ctla2b-201ENSMUST00000021884 842 ntAPPRIS P4 TSL 1 (best) BASIC5.81□□□□□ -1.48
Smc1aQ9CU62 AC101709.1-201ENSMUST00000220276 909 ntTSL 5 BASIC5.81□□□□□ -1.48
Smc1aQ9CU62 CT030182.2-201ENSMUST00000223569 620 ntBASIC5.81□□□□□ -1.48
Smc1aQ9CU62 AC153153.2-201ENSMUST00000223572 411 ntBASIC5.81□□□□□ -1.48
Smc1aQ9CU62 Cetn2-201ENSMUST00000033713 1026 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Smc1aQ9CU62 Anapc13-201ENSMUST00000038673 411 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Smc1aQ9CU62 Olfr1302-201ENSMUST00000054004 948 ntAPPRIS P2 BASIC5.81□□□□□ -1.48
Smc1aQ9CU62 Gm25134-201ENSMUST00000082646 160 ntBASIC5.81□□□□□ -1.48
Smc1aQ9CU62 Mir129-1-201ENSMUST00000083535 73 ntBASIC5.81□□□□□ -1.48
Smc1aQ9CU62 Mrgprb3-201ENSMUST00000094383 1009 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Smc1aQ9CU62 Defb25-201ENSMUST00000099203 293 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Smc1aQ9CU62 Mga-201ENSMUST00000046717 11982 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Smc1aQ9CU62 Gm14139-202ENSMUST00000109929 1485 ntTSL 5 BASIC5.81□□□□□ -1.48
Smc1aQ9CU62 Olfr1120-202ENSMUST00000215163 4404 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
Smc1aQ9CU62 Cpb2-201ENSMUST00000022576 1477 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Smc1aQ9CU62 Gm37226-201ENSMUST00000191644 3255 ntBASIC5.81□□□□□ -1.48
Smc1aQ9CU62 Clca4c-ps-202ENSMUST00000200595 2779 ntBASIC5.81□□□□□ -1.48
Smc1aQ9CU62 Vmn1r6-205ENSMUST00000227631 7805 ntAPPRIS ALT2 BASIC5.81□□□□□ -1.48
Smc1aQ9CU62 Gm18493-201ENSMUST00000192084 1612 ntBASIC5.81□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms