Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Gm23777-201ENSMUST00000158994 259 ntBASIC5.31□□□□□ -1.56
Msh4Q99MT2 Gm3173-202ENSMUST00000164603 519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Msh4Q99MT2 Gm3264-201ENSMUST00000166410 519 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Msh4Q99MT2 Gm8108-201ENSMUST00000167397 519 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
Msh4Q99MT2 Vmn1r-ps11-201ENSMUST00000176097 853 ntBASIC5.31□□□□□ -1.56
Msh4Q99MT2 Gm3005-201ENSMUST00000178060 444 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Msh4Q99MT2 Gm3488-201ENSMUST00000178220 519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Msh4Q99MT2 Trav12n-3-201ENSMUST00000179583 353 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Msh4Q99MT2 Gm3317-201ENSMUST00000179659 519 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Msh4Q99MT2 Gm3696-202ENSMUST00000179898 612 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Msh4Q99MT2 Gm5798-202ENSMUST00000179987 582 ntTSL 3 BASIC5.31□□□□□ -1.56
Msh4Q99MT2 Gm4258-201ENSMUST00000182127 506 ntTSL 2 BASIC5.31□□□□□ -1.56
Msh4Q99MT2 Rps12-ps24-201ENSMUST00000182321 381 ntBASIC5.31□□□□□ -1.56
Msh4Q99MT2 Mir7235-201ENSMUST00000183796 56 ntBASIC5.31□□□□□ -1.56
Msh4Q99MT2 Gm28943-201ENSMUST00000186187 615 ntBASIC5.31□□□□□ -1.56
Msh4Q99MT2 Gm28736-201ENSMUST00000186257 615 ntBASIC5.31□□□□□ -1.56
Msh4Q99MT2 Gm29401-201ENSMUST00000186690 615 ntBASIC5.31□□□□□ -1.56
Msh4Q99MT2 Gm29178-204ENSMUST00000186784 615 ntBASIC5.31□□□□□ -1.56
Msh4Q99MT2 Gm28589-201ENSMUST00000186991 615 ntBASIC5.31□□□□□ -1.56
Msh4Q99MT2 Gm28936-201ENSMUST00000187153 615 ntBASIC5.31□□□□□ -1.56
Msh4Q99MT2 Gm28917-201ENSMUST00000187294 237 ntBASIC5.31□□□□□ -1.56
Msh4Q99MT2 Gm29121-201ENSMUST00000187611 615 ntBASIC5.31□□□□□ -1.56
Msh4Q99MT2 Gm28243-201ENSMUST00000187801 615 ntBASIC5.31□□□□□ -1.56
Msh4Q99MT2 Gm28844-202ENSMUST00000187977 615 ntBASIC5.31□□□□□ -1.56
Msh4Q99MT2 Gm29058-201ENSMUST00000189510 615 ntBASIC5.31□□□□□ -1.56
Msh4Q99MT2 Gm5734-201ENSMUST00000189787 913 ntBASIC5.31□□□□□ -1.56
Msh4Q99MT2 Gm29624-201ENSMUST00000190018 615 ntBASIC5.31□□□□□ -1.56
Msh4Q99MT2 Gm28780-201ENSMUST00000190223 615 ntBASIC5.31□□□□□ -1.56
Msh4Q99MT2 Gm28969-211ENSMUST00000190992 615 ntBASIC5.31□□□□□ -1.56
Msh4Q99MT2 Gm28766-201ENSMUST00000191086 234 ntBASIC5.31□□□□□ -1.56
Msh4Q99MT2 Gm28990-207ENSMUST00000191219 615 ntBASIC5.31□□□□□ -1.56
Msh4Q99MT2 Gm36468-201ENSMUST00000192119 615 ntBASIC5.31□□□□□ -1.56
Msh4Q99MT2 Ighv1-3-201ENSMUST00000192764 302 ntBASIC5.31□□□□□ -1.56
Msh4Q99MT2 Gm31572-201ENSMUST00000193341 615 ntBASIC5.31□□□□□ -1.56
Msh4Q99MT2 Gm30175-201ENSMUST00000194173 615 ntBASIC5.31□□□□□ -1.56
Msh4Q99MT2 Gm30858-201ENSMUST00000195516 615 ntBASIC5.31□□□□□ -1.56
Msh4Q99MT2 Gm32051-201ENSMUST00000196818 709 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Msh4Q99MT2 Rrh-208ENSMUST00000200079 1106 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Msh4Q99MT2 Snhg1-211ENSMUST00000206155 605 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Msh4Q99MT2 Gm19880-201ENSMUST00000207731 318 ntBASIC5.31□□□□□ -1.56
Msh4Q99MT2 Gm34096-201ENSMUST00000211296 530 ntTSL 3 BASIC5.31□□□□□ -1.56
Msh4Q99MT2 Gm45820-201ENSMUST00000212068 362 ntTSL 3 BASIC5.31□□□□□ -1.56
Msh4Q99MT2 Gm45722-201ENSMUST00000213075 466 ntBASIC5.31□□□□□ -1.56
Msh4Q99MT2 AC091522.1-201ENSMUST00000213934 850 ntTSL 5 BASIC5.31□□□□□ -1.56
Msh4Q99MT2 AC122332.1-201ENSMUST00000214384 285 ntBASIC5.31□□□□□ -1.56
Msh4Q99MT2 Gm18585-201ENSMUST00000215197 556 ntBASIC5.31□□□□□ -1.56
Msh4Q99MT2 Gm18705-201ENSMUST00000215985 913 ntBASIC5.31□□□□□ -1.56
Msh4Q99MT2 Gm19174-201ENSMUST00000216944 956 ntBASIC5.31□□□□□ -1.56
Msh4Q99MT2 Gm31698-203ENSMUST00000217115 690 ntTSL 5 BASIC5.31□□□□□ -1.56
Msh4Q99MT2 CT571256.1-201ENSMUST00000226045 585 ntBASIC5.31□□□□□ -1.56
Msh4Q99MT2 Olfr867-201ENSMUST00000060780 996 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Msh4Q99MT2 Olfr352-201ENSMUST00000065416 948 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Msh4Q99MT2 Vmn1r80-201ENSMUST00000075053 927 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Msh4Q99MT2 Gm26163-201ENSMUST00000083792 178 ntBASIC5.31□□□□□ -1.56
Msh4Q99MT2 Olfr477-201ENSMUST00000091605 933 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Msh4Q99MT2 Spink13-201ENSMUST00000097557 796 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Msh4Q99MT2 Nxf2-201ENSMUST00000010085 2393 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Msh4Q99MT2 Gm38451-201ENSMUST00000208329 2646 ntBASIC5.31□□□□□ -1.56
Msh4Q99MT2 Pigb-201ENSMUST00000093819 2866 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Msh4Q99MT2 A830019P07Rik-201ENSMUST00000178904 1777 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Msh4Q99MT2 Olfr668-202ENSMUST00000215359 3613 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Msh4Q99MT2 AC159193.1-201ENSMUST00000222872 2517 ntBASIC5.31□□□□□ -1.56
Msh4Q99MT2 4921529L05Rik-201ENSMUST00000203047 1997 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Msh4Q99MT2 Fam26d-201ENSMUST00000048052 3711 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Msh4Q99MT2 Olfr266-202ENSMUST00000213616 2195 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Msh4Q99MT2 Lrrc4c-202ENSMUST00000135431 3646 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Msh4Q99MT2 Gm42923-201ENSMUST00000198438 2896 ntBASIC5.3□□□□□ -1.56
Msh4Q99MT2 Gm45263-201ENSMUST00000210377 1375 ntBASIC5.3□□□□□ -1.56
Msh4Q99MT2 Gm43857-201ENSMUST00000200343 3079 ntBASIC5.3□□□□□ -1.56
Msh4Q99MT2 Olfr461-202ENSMUST00000215009 4292 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Msh4Q99MT2 Olfr1308-202ENSMUST00000207560 2093 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
Msh4Q99MT2 Olfr1500-201ENSMUST00000067670 2092 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Msh4Q99MT2 Aftph-205ENSMUST00000146722 3763 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
Msh4Q99MT2 Gm37221-201ENSMUST00000194472 3007 ntBASIC5.3□□□□□ -1.56
Msh4Q99MT2 Olfr753-ps1-203ENSMUST00000208970 2764 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Msh4Q99MT2 Cdk14-201ENSMUST00000030763 4851 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
Msh4Q99MT2 Cbx5-202ENSMUST00000118152 8803 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Msh4Q99MT2 Olfr685-202ENSMUST00000209409 3179 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
Msh4Q99MT2 Gm44248-201ENSMUST00000203079 1549 ntBASIC5.3□□□□□ -1.56
Msh4Q99MT2 Gm24265-201ENSMUST00000101833 141 ntBASIC5.3□□□□□ -1.56
Msh4Q99MT2 Trav14d-3-dv8-201ENSMUST00000103608 456 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Msh4Q99MT2 Gm26067-201ENSMUST00000103789 110 ntBASIC5.3□□□□□ -1.56
Msh4Q99MT2 Gm26474-201ENSMUST00000116762 122 ntBASIC5.3□□□□□ -1.56
Msh4Q99MT2 Gm3943-201ENSMUST00000118606 718 ntBASIC5.3□□□□□ -1.56
Msh4Q99MT2 Gm12303-201ENSMUST00000119506 673 ntBASIC5.3□□□□□ -1.56
Msh4Q99MT2 Klra14-ps-201ENSMUST00000119532 802 ntBASIC5.3□□□□□ -1.56
Msh4Q99MT2 Mup-ps21-201ENSMUST00000119998 448 ntBASIC5.3□□□□□ -1.56
Msh4Q99MT2 Mup-ps19-201ENSMUST00000120390 519 ntBASIC5.3□□□□□ -1.56
Msh4Q99MT2 Atf1-ps-201ENSMUST00000120608 810 ntBASIC5.3□□□□□ -1.56
Msh4Q99MT2 Gm11575-201ENSMUST00000122243 228 ntBASIC5.3□□□□□ -1.56
Msh4Q99MT2 Gm11844-201ENSMUST00000129207 459 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Msh4Q99MT2 Gm13189-201ENSMUST00000138462 252 ntTSL 3 BASIC5.3□□□□□ -1.56
Msh4Q99MT2 Gm12147-201ENSMUST00000144024 182 ntTSL 3 BASIC5.3□□□□□ -1.56
Msh4Q99MT2 Mir1970-201ENSMUST00000157839 104 ntBASIC5.3□□□□□ -1.56
Msh4Q99MT2 Gm16146-201ENSMUST00000160306 439 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Msh4Q99MT2 Gm22122-201ENSMUST00000175147 200 ntBASIC5.3□□□□□ -1.56
Msh4Q99MT2 Gm24407-201ENSMUST00000177864 141 ntBASIC5.3□□□□□ -1.56
Msh4Q99MT2 Gm21718-202ENSMUST00000186974 817 ntTSL 5 BASIC5.3□□□□□ -1.56
Msh4Q99MT2 Gm8581-201ENSMUST00000188636 890 ntBASIC5.3□□□□□ -1.56
Msh4Q99MT2 Gm37768-201ENSMUST00000192748 887 ntTSL 3 BASIC5.3□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 93.4 ms