Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Hmmr-201ENSMUST00000020579 3892 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Brf1Q8CFK2 Gm18163-201ENSMUST00000197877 1643 ntBASIC6.47□□□□□ -1.37
Brf1Q8CFK2 Far1-202ENSMUST00000067929 4935 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
Brf1Q8CFK2 Gm20707-201ENSMUST00000176201 2516 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
Brf1Q8CFK2 4833421K07Rik-201ENSMUST00000206146 1391 ntBASIC6.46□□□□□ -1.37
Brf1Q8CFK2 Smc5-206ENSMUST00000226111 3265 ntBASIC6.46□□□□□ -1.37
Brf1Q8CFK2 Olfr633-202ENSMUST00000216006 3915 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Brf1Q8CFK2 Lcor-202ENSMUST00000163929 4663 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Brf1Q8CFK2 Lrrc69-202ENSMUST00000108276 1210 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Brf1Q8CFK2 Gm6134-201ENSMUST00000117265 171 ntBASIC6.46□□□□□ -1.38
Brf1Q8CFK2 Gm12074-201ENSMUST00000120189 219 ntBASIC6.46□□□□□ -1.38
Brf1Q8CFK2 Gm12383-201ENSMUST00000120628 760 ntBASIC6.46□□□□□ -1.38
Brf1Q8CFK2 Gm16055-201ENSMUST00000161366 626 ntTSL 2 BASIC6.46□□□□□ -1.38
Brf1Q8CFK2 Ctla2b-202ENSMUST00000171347 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
Brf1Q8CFK2 Gm21860-201ENSMUST00000177893 309 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Brf1Q8CFK2 Gm24754-201ENSMUST00000177997 107 ntBASIC6.46□□□□□ -1.38
Brf1Q8CFK2 Gm21882-201ENSMUST00000178332 1083 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Brf1Q8CFK2 Gm21748-201ENSMUST00000179623 309 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Brf1Q8CFK2 Mir6412-201ENSMUST00000184477 97 ntBASIC6.46□□□□□ -1.38
Brf1Q8CFK2 Gm27781-201ENSMUST00000185185 92 ntBASIC6.46□□□□□ -1.38
Brf1Q8CFK2 Gm37056-201ENSMUST00000192141 1865 ntBASIC6.46□□□□□ -1.38
Brf1Q8CFK2 Gm9931-201ENSMUST00000193584 1185 ntBASIC6.46□□□□□ -1.38
Brf1Q8CFK2 Gm37987-201ENSMUST00000194999 825 ntBASIC6.46□□□□□ -1.38
Brf1Q8CFK2 Gm38334-201ENSMUST00000195060 313 ntBASIC6.46□□□□□ -1.38
Brf1Q8CFK2 Gm37220-201ENSMUST00000195179 415 ntTSL 5 BASIC6.46□□□□□ -1.38
Brf1Q8CFK2 Gm37134-201ENSMUST00000195810 628 ntTSL 3 BASIC6.46□□□□□ -1.38
Brf1Q8CFK2 Mir409-201ENSMUST00000198153 79 ntBASIC6.46□□□□□ -1.38
Brf1Q8CFK2 Gm44796-201ENSMUST00000205272 626 ntTSL 2 BASIC6.46□□□□□ -1.38
Brf1Q8CFK2 Gm34853-201ENSMUST00000211662 509 ntTSL 5 BASIC6.46□□□□□ -1.38
Brf1Q8CFK2 Olfr473-202ENSMUST00000217618 2319 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
Brf1Q8CFK2 AC158803.2-201ENSMUST00000219452 679 ntBASIC6.46□□□□□ -1.38
Brf1Q8CFK2 Prl2c2-203ENSMUST00000221612 596 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Brf1Q8CFK2 CT033778.1-201ENSMUST00000224767 767 ntBASIC6.46□□□□□ -1.38
Brf1Q8CFK2 AC133654.1-201ENSMUST00000228411 672 ntBASIC6.46□□□□□ -1.38
Brf1Q8CFK2 Cept1-201ENSMUST00000039153 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Brf1Q8CFK2 Lgals2-201ENSMUST00000044584 590 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Brf1Q8CFK2 Olfr1463-201ENSMUST00000064102 933 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Brf1Q8CFK2 Tas2r107-201ENSMUST00000065781 1032 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Brf1Q8CFK2 Olfr1261-201ENSMUST00000077785 921 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Brf1Q8CFK2 Snora30-201ENSMUST00000083325 130 ntBASIC6.46□□□□□ -1.38
Brf1Q8CFK2 Gm25682-201ENSMUST00000083942 164 ntBASIC6.46□□□□□ -1.38
Brf1Q8CFK2 Ube2u-201ENSMUST00000092730 1435 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Brf1Q8CFK2 Olfr78-201ENSMUST00000060187 3410 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Brf1Q8CFK2 Olfr145-201ENSMUST00000086062 6796 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Brf1Q8CFK2 AI987944-201ENSMUST00000071804 2671 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
Brf1Q8CFK2 Stk3-205ENSMUST00000226555 2730 ntAPPRIS ALT2 BASIC6.46□□□□□ -1.38
Brf1Q8CFK2 Olfr378-201ENSMUST00000069790 1508 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
Brf1Q8CFK2 Olfr906-202ENSMUST00000214344 3775 ntAPPRIS P1 TSL 3 BASIC6.45□□□□□ -1.38
Brf1Q8CFK2 Ezh1-201ENSMUST00000100417 3636 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Brf1Q8CFK2 Gm37717-201ENSMUST00000192647 3027 ntBASIC6.45□□□□□ -1.38
Brf1Q8CFK2 Olfr221-202ENSMUST00000214071 3044 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Brf1Q8CFK2 Gm2080-201ENSMUST00000211299 1573 ntBASIC6.45□□□□□ -1.38
Brf1Q8CFK2 Rbm46-202ENSMUST00000182637 2058 ntTSL 5 BASIC6.45□□□□□ -1.38
Brf1Q8CFK2 Iqca-207ENSMUST00000212394 2574 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
Brf1Q8CFK2 Ncoa7-202ENSMUST00000092610 2590 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Brf1Q8CFK2 Gm14912-201ENSMUST00000120166 1773 ntBASIC6.45□□□□□ -1.38
Brf1Q8CFK2 Ighv1-20-201ENSMUST00000103506 348 ntAPPRIS ALT2 BASIC6.45□□□□□ -1.38
Brf1Q8CFK2 Spaca1-203ENSMUST00000108148 833 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Brf1Q8CFK2 Olfr1296-ps1-201ENSMUST00000117697 939 ntBASIC6.45□□□□□ -1.38
Brf1Q8CFK2 Gm12281-201ENSMUST00000119536 298 ntBASIC6.45□□□□□ -1.38
Brf1Q8CFK2 Gm15428-201ENSMUST00000121352 333 ntBASIC6.45□□□□□ -1.38
Brf1Q8CFK2 Gm12413-201ENSMUST00000121508 312 ntBASIC6.45□□□□□ -1.38
Brf1Q8CFK2 Gm25176-201ENSMUST00000122640 125 ntBASIC6.45□□□□□ -1.38
Brf1Q8CFK2 Gm24216-201ENSMUST00000158259 117 ntBASIC6.45□□□□□ -1.38
Brf1Q8CFK2 AY512915-204ENSMUST00000162315 676 ntTSL 3 BASIC6.45□□□□□ -1.38
Brf1Q8CFK2 Gm8256-201ENSMUST00000169178 453 ntBASIC6.45□□□□□ -1.38
Brf1Q8CFK2 Gm17268-201ENSMUST00000171515 66 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Brf1Q8CFK2 Hspe1-ps3-201ENSMUST00000172726 277 ntBASIC6.45□□□□□ -1.38
Brf1Q8CFK2 Gm10717-207ENSMUST00000179264 672 ntTSL 5 BASIC6.45□□□□□ -1.38
Brf1Q8CFK2 Gm5849-201ENSMUST00000180151 351 ntAPPRIS P1 TSL 3 BASIC6.45□□□□□ -1.38
Brf1Q8CFK2 Gm27985-201ENSMUST00000185112 378 ntBASIC6.45□□□□□ -1.38
Brf1Q8CFK2 Il6-202ENSMUST00000195978 651 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Brf1Q8CFK2 Gm43215-201ENSMUST00000199108 252 ntBASIC6.45□□□□□ -1.38
Brf1Q8CFK2 4930478M09Rik-201ENSMUST00000201366 1113 ntBASIC6.45□□□□□ -1.38
Brf1Q8CFK2 Gm2762-204ENSMUST00000201815 537 ntTSL 3 BASIC6.45□□□□□ -1.38
Brf1Q8CFK2 Gm15754-202ENSMUST00000202846 758 ntTSL 3 BASIC6.45□□□□□ -1.38
Brf1Q8CFK2 Gm44134-201ENSMUST00000203064 661 ntTSL 2 BASIC6.45□□□□□ -1.38
Brf1Q8CFK2 Gm45382-201ENSMUST00000210607 151 ntBASIC6.45□□□□□ -1.38
Brf1Q8CFK2 AC171206.1-201ENSMUST00000213612 213 ntBASIC6.45□□□□□ -1.38
Brf1Q8CFK2 Olfr1089-201ENSMUST00000214317 1118 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Brf1Q8CFK2 Gm19987-201ENSMUST00000216339 499 ntBASIC6.45□□□□□ -1.38
Brf1Q8CFK2 Gm36367-201ENSMUST00000217623 1158 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Brf1Q8CFK2 AC155808.1-201ENSMUST00000219288 409 ntBASIC6.45□□□□□ -1.38
Brf1Q8CFK2 A930023M06Rik-201ENSMUST00000223270 1093 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Brf1Q8CFK2 AL671874.1-201ENSMUST00000223746 1123 ntBASIC6.45□□□□□ -1.38
Brf1Q8CFK2 Fcer1a-201ENSMUST00000049706 998 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Brf1Q8CFK2 Olfr738-201ENSMUST00000058972 936 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Brf1Q8CFK2 Klk1b9-201ENSMUST00000081399 870 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Brf1Q8CFK2 Olfr570-201ENSMUST00000098215 1045 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Brf1Q8CFK2 Gm10717-203ENSMUST00000099051 639 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
Brf1Q8CFK2 Gm5590-202ENSMUST00000186976 2315 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Brf1Q8CFK2 Gm37779-201ENSMUST00000194221 3380 ntBASIC6.45□□□□□ -1.38
Brf1Q8CFK2 Gm28687-201ENSMUST00000187203 1494 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Brf1Q8CFK2 Gm29373-201ENSMUST00000190660 1494 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Brf1Q8CFK2 Vmn1r218-203ENSMUST00000227050 10364 ntAPPRIS P2 BASIC6.45□□□□□ -1.38
Brf1Q8CFK2 4732416N19Rik-201ENSMUST00000203932 3479 ntBASIC6.45□□□□□ -1.38
Brf1Q8CFK2 2900079G21Rik-204ENSMUST00000163302 2764 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Brf1Q8CFK2 3110099E03Rik-202ENSMUST00000134580 2644 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Brf1Q8CFK2 Vmn1r39-204ENSMUST00000227555 2297 ntAPPRIS P2 BASIC6.45□□□□□ -1.38
Brf1Q8CFK2 Slc9a9-201ENSMUST00000033463 3468 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 96.9 ms