Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Gm8874-201ENSMUST00000196826 286 ntBASIC5.12□□□□□ -1.59
Ccdc28aQ8CEI3 Igkv12-40-201ENSMUST00000199208 347 ntBASIC5.12□□□□□ -1.59
Ccdc28aQ8CEI3 Gm7721-201ENSMUST00000200446 546 ntBASIC5.12□□□□□ -1.59
Ccdc28aQ8CEI3 1700065J11Rik-201ENSMUST00000201560 424 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Ccdc28aQ8CEI3 Gm32453-201ENSMUST00000204183 456 ntBASIC5.12□□□□□ -1.59
Ccdc28aQ8CEI3 Gm31897-201ENSMUST00000205924 340 ntTSL 5 BASIC5.12□□□□□ -1.59
Ccdc28aQ8CEI3 Gm19196-201ENSMUST00000209258 357 ntBASIC5.12□□□□□ -1.59
Ccdc28aQ8CEI3 Gm44992-209ENSMUST00000209680 1083 ntTSL 5 BASIC5.12□□□□□ -1.59
Ccdc28aQ8CEI3 AC112956.1-201ENSMUST00000213563 492 ntBASIC5.12□□□□□ -1.59
Ccdc28aQ8CEI3 4930405J17Rik-201ENSMUST00000214323 620 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Ccdc28aQ8CEI3 4930543I11Rik-201ENSMUST00000219006 959 ntBASIC5.12□□□□□ -1.59
Ccdc28aQ8CEI3 Gm6171-201ENSMUST00000220760 645 ntBASIC5.12□□□□□ -1.59
Ccdc28aQ8CEI3 AC127242.4-201ENSMUST00000221242 470 ntBASIC5.12□□□□□ -1.59
Ccdc28aQ8CEI3 AC123534.1-201ENSMUST00000224060 656 ntBASIC5.12□□□□□ -1.59
Ccdc28aQ8CEI3 AC154484.2-201ENSMUST00000228359 818 ntBASIC5.12□□□□□ -1.59
Ccdc28aQ8CEI3 Gm14393-201ENSMUST00000072895 625 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
Ccdc28aQ8CEI3 Olfr968-201ENSMUST00000075928 1027 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Ccdc28aQ8CEI3 n-R5-8s1-201ENSMUST00000083988 148 ntBASIC5.12□□□□□ -1.59
Ccdc28aQ8CEI3 Fam24a-201ENSMUST00000084505 371 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Ccdc28aQ8CEI3 Clca4c-ps-201ENSMUST00000098551 712 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Ccdc28aQ8CEI3 Adam7-201ENSMUST00000022640 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Ccdc28aQ8CEI3 Fam122b-202ENSMUST00000114838 3536 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
Ccdc28aQ8CEI3 Gm37180-201ENSMUST00000195335 2819 ntBASIC5.12□□□□□ -1.59
Ccdc28aQ8CEI3 Gm37733-201ENSMUST00000195478 2962 ntBASIC5.12□□□□□ -1.59
Ccdc28aQ8CEI3 Fbxw18-201ENSMUST00000098359 1519 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Ccdc28aQ8CEI3 Zfp62-202ENSMUST00000109197 4029 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Ccdc28aQ8CEI3 Gm37356-201ENSMUST00000193362 1613 ntBASIC5.12□□□□□ -1.59
Ccdc28aQ8CEI3 Ogt-201ENSMUST00000044475 5384 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
Ccdc28aQ8CEI3 Olfr1016-203ENSMUST00000217410 2738 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
Ccdc28aQ8CEI3 Klhl28-203ENSMUST00000222508 6459 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Ccdc28aQ8CEI3 C130079G13Rik-201ENSMUST00000049476 2789 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Ccdc28aQ8CEI3 Olfr586-202ENSMUST00000211075 4562 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
Ccdc28aQ8CEI3 Gm23692-201ENSMUST00000101881 160 ntBASIC5.11□□□□□ -1.59
Ccdc28aQ8CEI3 Txndc8-201ENSMUST00000102897 620 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Ccdc28aQ8CEI3 Ighv1-20-201ENSMUST00000103506 348 ntAPPRIS ALT2 BASIC5.11□□□□□ -1.59
Ccdc28aQ8CEI3 Gm14909-201ENSMUST00000117853 351 ntBASIC5.11□□□□□ -1.59
Ccdc28aQ8CEI3 Gm11790-201ENSMUST00000119569 455 ntBASIC5.11□□□□□ -1.59
Ccdc28aQ8CEI3 Gm11861-201ENSMUST00000141571 382 ntTSL 3 BASIC5.11□□□□□ -1.59
Ccdc28aQ8CEI3 Gm24065-201ENSMUST00000157487 264 ntBASIC5.11□□□□□ -1.59
Ccdc28aQ8CEI3 Gm16566-201ENSMUST00000160387 910 ntBASIC5.11□□□□□ -1.59
Ccdc28aQ8CEI3 Skint1-205ENSMUST00000162885 603 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Ccdc28aQ8CEI3 Gm3727-201ENSMUST00000168458 995 ntAPPRIS P5 TSL 5 BASIC5.11□□□□□ -1.59
Ccdc28aQ8CEI3 Snhg14-201ENSMUST00000185272 726 ntTSL 5 BASIC5.11□□□□□ -1.59
Ccdc28aQ8CEI3 Gm37243-201ENSMUST00000193407 595 ntBASIC5.11□□□□□ -1.59
Ccdc28aQ8CEI3 Gm37190-201ENSMUST00000193580 688 ntTSL 5 BASIC5.11□□□□□ -1.59
Ccdc28aQ8CEI3 A730094K22Rik-201ENSMUST00000193867 740 ntBASIC5.11□□□□□ -1.59
Ccdc28aQ8CEI3 Gm8953-201ENSMUST00000198497 904 ntTSL 5 BASIC5.11□□□□□ -1.59
Ccdc28aQ8CEI3 Arl8b-202ENSMUST00000204483 695 ntTSL 3 BASIC5.11□□□□□ -1.59
Ccdc28aQ8CEI3 Gm44091-201ENSMUST00000205212 649 ntBASIC5.11□□□□□ -1.59
Ccdc28aQ8CEI3 Gm18468-201ENSMUST00000207321 369 ntBASIC5.11□□□□□ -1.59
Ccdc28aQ8CEI3 Gm18470-201ENSMUST00000207467 420 ntBASIC5.11□□□□□ -1.59
Ccdc28aQ8CEI3 Gm18465-201ENSMUST00000207468 369 ntBASIC5.11□□□□□ -1.59
Ccdc28aQ8CEI3 Gm18464-201ENSMUST00000207803 420 ntBASIC5.11□□□□□ -1.59
Ccdc28aQ8CEI3 Gm18458-201ENSMUST00000207908 369 ntBASIC5.11□□□□□ -1.59
Ccdc28aQ8CEI3 Gm18461-201ENSMUST00000208421 420 ntBASIC5.11□□□□□ -1.59
Ccdc28aQ8CEI3 AC123832.2-201ENSMUST00000215151 129 ntBASIC5.11□□□□□ -1.59
Ccdc28aQ8CEI3 AC159252.1-201ENSMUST00000224450 553 ntBASIC5.11□□□□□ -1.59
Ccdc28aQ8CEI3 AC121912.1-201ENSMUST00000227525 1201 ntBASIC5.11□□□□□ -1.59
Ccdc28aQ8CEI3 AC123665.6-201ENSMUST00000228568 538 ntBASIC5.11□□□□□ -1.59
Ccdc28aQ8CEI3 Defb42-201ENSMUST00000067990 618 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Ccdc28aQ8CEI3 Gm23972-201ENSMUST00000083322 165 ntBASIC5.11□□□□□ -1.59
Ccdc28aQ8CEI3 Mir331-201ENSMUST00000083673 96 ntBASIC5.11□□□□□ -1.59
Ccdc28aQ8CEI3 Olfr1449-203ENSMUST00000214079 1304 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Ccdc28aQ8CEI3 Prame-201ENSMUST00000033786 1395 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Ccdc28aQ8CEI3 Igsf10-202ENSMUST00000193455 8484 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Ccdc28aQ8CEI3 Tfpi-201ENSMUST00000028487 1492 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Ccdc28aQ8CEI3 Skint5-204ENSMUST00000171627 1611 ntTSL 5 BASIC5.11□□□□□ -1.59
Ccdc28aQ8CEI3 A430027C01Rik-201ENSMUST00000194599 1644 ntBASIC5.11□□□□□ -1.59
Ccdc28aQ8CEI3 4930519E07Rik-201ENSMUST00000200907 1665 ntBASIC5.11□□□□□ -1.59
Ccdc28aQ8CEI3 4930579C12Rik-202ENSMUST00000187015 3676 ntTSL 2 BASIC5.11□□□□□ -1.59
Ccdc28aQ8CEI3 Cnot2-213ENSMUST00000169921 2120 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Ccdc28aQ8CEI3 Zfp715-202ENSMUST00000048015 4333 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Ccdc28aQ8CEI3 Olfr560-201ENSMUST00000210453 2168 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Ccdc28aQ8CEI3 Gm25419-201ENSMUST00000104215 191 ntBASIC5.1□□□□□ -1.59
Ccdc28aQ8CEI3 Gm13023-202ENSMUST00000105770 833 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
Ccdc28aQ8CEI3 Spata17-202ENSMUST00000110945 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
Ccdc28aQ8CEI3 Gm14220-201ENSMUST00000118114 449 ntBASIC5.1□□□□□ -1.59
Ccdc28aQ8CEI3 Gm14516-201ENSMUST00000120012 252 ntBASIC5.1□□□□□ -1.59
Ccdc28aQ8CEI3 Gm13121-201ENSMUST00000120637 632 ntBASIC5.1□□□□□ -1.59
Ccdc28aQ8CEI3 Gm13132-201ENSMUST00000121194 472 ntBASIC5.1□□□□□ -1.59
Ccdc28aQ8CEI3 Gm9428-201ENSMUST00000127214 769 ntBASIC5.1□□□□□ -1.59
Ccdc28aQ8CEI3 Gm16321-201ENSMUST00000155184 574 ntTSL 3 BASIC5.1□□□□□ -1.59
Ccdc28aQ8CEI3 Gm22601-201ENSMUST00000157595 250 ntBASIC5.1□□□□□ -1.59
Ccdc28aQ8CEI3 Gm16161-201ENSMUST00000162239 290 ntTSL 2 BASIC5.1□□□□□ -1.59
Ccdc28aQ8CEI3 Gm5777-201ENSMUST00000177265 448 ntBASIC5.1□□□□□ -1.59
Ccdc28aQ8CEI3 Gm28957-201ENSMUST00000190174 373 ntBASIC5.1□□□□□ -1.59
Ccdc28aQ8CEI3 Ighv6-2-201ENSMUST00000192430 295 ntBASIC5.1□□□□□ -1.59
Ccdc28aQ8CEI3 Gm40263-201ENSMUST00000197468 580 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Ccdc28aQ8CEI3 Gm42504-201ENSMUST00000198312 525 ntTSL 3 BASIC5.1□□□□□ -1.59
Ccdc28aQ8CEI3 Gm42910-201ENSMUST00000198917 2921 ntBASIC5.1□□□□□ -1.59
Ccdc28aQ8CEI3 Gm18330-201ENSMUST00000199246 547 ntBASIC5.1□□□□□ -1.59
Ccdc28aQ8CEI3 Gm43831-201ENSMUST00000200461 2598 ntBASIC5.1□□□□□ -1.59
Ccdc28aQ8CEI3 Gm44523-201ENSMUST00000205616 417 ntBASIC5.1□□□□□ -1.59
Ccdc28aQ8CEI3 Gm44779-201ENSMUST00000206937 708 ntBASIC5.1□□□□□ -1.59
Ccdc28aQ8CEI3 Olfr563-ps1-201ENSMUST00000210909 873 ntBASIC5.1□□□□□ -1.59
Ccdc28aQ8CEI3 Gm19170-201ENSMUST00000212440 1084 ntBASIC5.1□□□□□ -1.59
Ccdc28aQ8CEI3 Gm39384-201ENSMUST00000213703 743 ntTSL 5 BASIC5.1□□□□□ -1.59
Ccdc28aQ8CEI3 AC151971.3-201ENSMUST00000214694 404 ntBASIC5.1□□□□□ -1.59
Ccdc28aQ8CEI3 AC164164.2-201ENSMUST00000221809 785 ntBASIC5.1□□□□□ -1.59
Ccdc28aQ8CEI3 AC133076.2-201ENSMUST00000227678 3532 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms