Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Svs3a-202ENSMUST00000109370 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Ccdc28bQ8CEG5 Gm15421-202ENSMUST00000118224 399 ntBASIC5.02□□□□□ -1.61
Ccdc28bQ8CEG5 Gm12007-201ENSMUST00000120978 597 ntBASIC5.02□□□□□ -1.61
Ccdc28bQ8CEG5 4930440I19Rik-201ENSMUST00000144728 992 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Ccdc28bQ8CEG5 Gm16134-201ENSMUST00000161714 336 ntBASIC5.02□□□□□ -1.61
Ccdc28bQ8CEG5 Gm17118-201ENSMUST00000164032 335 ntTSL 5 BASIC5.02□□□□□ -1.61
Ccdc28bQ8CEG5 Vmn1r-ps19-201ENSMUST00000177008 926 ntBASIC5.02□□□□□ -1.61
Ccdc28bQ8CEG5 Gm6472-201ENSMUST00000178147 651 ntBASIC5.02□□□□□ -1.61
Ccdc28bQ8CEG5 Gm2914-201ENSMUST00000186120 328 ntBASIC5.02□□□□□ -1.61
Ccdc28bQ8CEG5 Gm28353-201ENSMUST00000186482 570 ntBASIC5.02□□□□□ -1.61
Ccdc28bQ8CEG5 Gm28533-201ENSMUST00000186741 570 ntBASIC5.02□□□□□ -1.61
Ccdc28bQ8CEG5 1700023F02Rik-202ENSMUST00000188279 412 ntTSL 2 BASIC5.02□□□□□ -1.61
Ccdc28bQ8CEG5 2610509F24Rik-201ENSMUST00000193035 838 ntBASIC5.02□□□□□ -1.61
Ccdc28bQ8CEG5 Gm30667-201ENSMUST00000193120 870 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Ccdc28bQ8CEG5 AC099760.1-201ENSMUST00000196300 153 ntBASIC5.02□□□□□ -1.61
Ccdc28bQ8CEG5 1700015C17Rik-201ENSMUST00000197297 239 ntTSL 5 BASIC5.02□□□□□ -1.61
Ccdc28bQ8CEG5 Kap-202ENSMUST00000203168 464 ntAPPRIS ALT2 TSL 3 BASIC5.02□□□□□ -1.61
Ccdc28bQ8CEG5 Gm44523-201ENSMUST00000205616 417 ntBASIC5.02□□□□□ -1.61
Ccdc28bQ8CEG5 Gm44879-201ENSMUST00000207007 503 ntBASIC5.02□□□□□ -1.61
Ccdc28bQ8CEG5 Gm44849-201ENSMUST00000207595 484 ntBASIC5.02□□□□□ -1.61
Ccdc28bQ8CEG5 AC164087.1-201ENSMUST00000215174 733 ntTSL 3 BASIC5.02□□□□□ -1.61
Ccdc28bQ8CEG5 AC153537.1-201ENSMUST00000215530 858 ntTSL 5 BASIC5.02□□□□□ -1.61
Ccdc28bQ8CEG5 AC142113.2-201ENSMUST00000217425 748 ntBASIC5.02□□□□□ -1.61
Ccdc28bQ8CEG5 AC155808.1-201ENSMUST00000219288 409 ntBASIC5.02□□□□□ -1.61
Ccdc28bQ8CEG5 Aoah-202ENSMUST00000221982 919 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Ccdc28bQ8CEG5 Gm16497-202ENSMUST00000223480 557 ntTSL 3 BASIC5.02□□□□□ -1.61
Ccdc28bQ8CEG5 AC156802.1-201ENSMUST00000223623 579 ntBASIC5.02□□□□□ -1.61
Ccdc28bQ8CEG5 Olfr1367-201ENSMUST00000059216 1055 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Ccdc28bQ8CEG5 Zfp982-201ENSMUST00000063704 1244 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
Ccdc28bQ8CEG5 Ghrl-201ENSMUST00000064993 527 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
Ccdc28bQ8CEG5 Ang5-201ENSMUST00000066719 700 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Ccdc28bQ8CEG5 Olfr591-201ENSMUST00000074272 945 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Ccdc28bQ8CEG5 Olfr492-201ENSMUST00000079865 945 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Ccdc28bQ8CEG5 Mir99a-201ENSMUST00000083596 65 ntBASIC5.02□□□□□ -1.61
Ccdc28bQ8CEG5 Olfr806-201ENSMUST00000095245 942 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Ccdc28bQ8CEG5 Clca4c-ps-201ENSMUST00000098551 712 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Ccdc28bQ8CEG5 Ccdc66-202ENSMUST00000223689 4262 ntAPPRIS P2 BASIC5.02□□□□□ -1.61
Ccdc28bQ8CEG5 Evi2-202ENSMUST00000170422 3944 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Ccdc28bQ8CEG5 Gm43130-201ENSMUST00000197721 3907 ntBASIC5.02□□□□□ -1.61
Ccdc28bQ8CEG5 4932411K12Rik-203ENSMUST00000210384 1351 ntTSL 5 BASIC5.02□□□□□ -1.61
Ccdc28bQ8CEG5 Ccnb3-202ENSMUST00000115752 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Ccdc28bQ8CEG5 AC160931.3-201ENSMUST00000222111 2267 ntBASIC5.02□□□□□ -1.61
Ccdc28bQ8CEG5 Prrc2c-210ENSMUST00000182660 11502 ntAPPRIS P2 TSL 5 BASIC5.02□□□□□ -1.61
Ccdc28bQ8CEG5 Tnfrsf26-201ENSMUST00000055723 3107 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Ccdc28bQ8CEG5 Cabyr-204ENSMUST00000121018 1305 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
Ccdc28bQ8CEG5 Rif1-201ENSMUST00000112693 8509 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Ccdc28bQ8CEG5 Vmn2r83-201ENSMUST00000167976 2610 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Ccdc28bQ8CEG5 Olfr1166-202ENSMUST00000217575 2004 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Ccdc28bQ8CEG5 Gm25422-201ENSMUST00000104219 129 ntBASIC5.01□□□□□ -1.61
Ccdc28bQ8CEG5 Gm11486-201ENSMUST00000107322 478 ntBASIC5.01□□□□□ -1.61
Ccdc28bQ8CEG5 Gm12401-201ENSMUST00000118435 228 ntBASIC5.01□□□□□ -1.61
Ccdc28bQ8CEG5 1700003G18Rik-202ENSMUST00000150518 312 ntTSL 3 BASIC5.01□□□□□ -1.61
Ccdc28bQ8CEG5 2810403D21Rik-207ENSMUST00000152089 852 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Ccdc28bQ8CEG5 Gm26373-201ENSMUST00000157833 103 ntBASIC5.01□□□□□ -1.61
Ccdc28bQ8CEG5 Gm6632-201ENSMUST00000168425 954 ntBASIC5.01□□□□□ -1.61
Ccdc28bQ8CEG5 Gm22859-201ENSMUST00000174978 122 ntBASIC5.01□□□□□ -1.61
Ccdc28bQ8CEG5 Vmn1r-ps17-201ENSMUST00000175797 894 ntBASIC5.01□□□□□ -1.61
Ccdc28bQ8CEG5 Gm28011-201ENSMUST00000184097 175 ntBASIC5.01□□□□□ -1.61
Ccdc28bQ8CEG5 Gm29588-201ENSMUST00000185738 298 ntBASIC5.01□□□□□ -1.61
Ccdc28bQ8CEG5 Mrgprb13-201ENSMUST00000188191 985 ntBASIC5.01□□□□□ -1.61
Ccdc28bQ8CEG5 Gm28701-201ENSMUST00000189778 1010 ntTSL 5 BASIC5.01□□□□□ -1.61
Ccdc28bQ8CEG5 Gm32554-201ENSMUST00000196310 970 ntTSL 5 BASIC5.01□□□□□ -1.61
Ccdc28bQ8CEG5 Gm4321-201ENSMUST00000200520 442 ntBASIC5.01□□□□□ -1.61
Ccdc28bQ8CEG5 Gm43794-201ENSMUST00000200971 692 ntBASIC5.01□□□□□ -1.61
Ccdc28bQ8CEG5 Olfr8-202ENSMUST00000203851 1009 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
Ccdc28bQ8CEG5 Smarca2-231ENSMUST00000208091 1140 ntTSL 5 BASIC5.01□□□□□ -1.61
Ccdc28bQ8CEG5 Vmn1r85-202ENSMUST00000209822 1251 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
Ccdc28bQ8CEG5 Gm6980-201ENSMUST00000214327 1003 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Ccdc28bQ8CEG5 Olfr44-203ENSMUST00000216316 1078 ntAPPRIS ALT2 TSL 3 BASIC5.01□□□□□ -1.61
Ccdc28bQ8CEG5 CT030242.3-201ENSMUST00000221231 581 ntBASIC5.01□□□□□ -1.61
Ccdc28bQ8CEG5 AC122295.1-201ENSMUST00000223476 388 ntBASIC5.01□□□□□ -1.61
Ccdc28bQ8CEG5 AC160980.2-201ENSMUST00000225131 949 ntBASIC5.01□□□□□ -1.61
Ccdc28bQ8CEG5 Olfr44-201ENSMUST00000077757 1071 ntAPPRIS P2 TSL 3 BASIC5.01□□□□□ -1.61
Ccdc28bQ8CEG5 Akr1c19-201ENSMUST00000081326 1242 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Ccdc28bQ8CEG5 n-R5s3-201ENSMUST00000083879 112 ntBASIC5.01□□□□□ -1.61
Ccdc28bQ8CEG5 Scgb2b27-201ENSMUST00000085620 512 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
Ccdc28bQ8CEG5 Olfr1024-201ENSMUST00000099912 984 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Ccdc28bQ8CEG5 Gm7903-201ENSMUST00000113172 3677 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
Ccdc28bQ8CEG5 Gm5128-201ENSMUST00000113173 3677 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Ccdc28bQ8CEG5 4930579C12Rik-202ENSMUST00000187015 3676 ntTSL 2 BASIC5.01□□□□□ -1.61
Ccdc28bQ8CEG5 Polk-202ENSMUST00000091387 2382 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Ccdc28bQ8CEG5 Vmn2r86-201ENSMUST00000170257 3039 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Ccdc28bQ8CEG5 Elavl4-204ENSMUST00000106598 3997 ntAPPRIS ALT1 TSL 5 BASIC5.01□□□□□ -1.61
Ccdc28bQ8CEG5 AC153532.3-201ENSMUST00000218660 3848 ntBASIC5.01□□□□□ -1.61
Ccdc28bQ8CEG5 Gm38190-201ENSMUST00000192350 4755 ntBASIC5.01□□□□□ -1.61
Ccdc28bQ8CEG5 Rps6ka3-204ENSMUST00000112493 3671 ntTSL 5 BASIC5.01□□□□□ -1.61
Ccdc28bQ8CEG5 Vmn2r43-201ENSMUST00000066317 2849 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Ccdc28bQ8CEG5 March1-211ENSMUST00000178982 4012 ntAPPRIS ALT1 TSL 5 BASIC5□□□□□ -1.61
Ccdc28bQ8CEG5 Gm14014-201ENSMUST00000156718 2717 ntTSL 1 (best) BASIC5□□□□□ -1.61
Ccdc28bQ8CEG5 Olfr690-203ENSMUST00000216230 2085 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Ccdc28bQ8CEG5 2700016F22Rik-201ENSMUST00000181556 3605 ntTSL 1 (best) BASIC5□□□□□ -1.61
Ccdc28bQ8CEG5 Gm23193-201ENSMUST00000102427 82 ntBASIC5□□□□□ -1.61
Ccdc28bQ8CEG5 Tcrg-V7-201ENSMUST00000103553 368 ntAPPRIS P1 BASIC5□□□□□ -1.61
Ccdc28bQ8CEG5 Nr3c2-202ENSMUST00000109911 3804 ntTSL 5 BASIC5□□□□□ -1.61
Ccdc28bQ8CEG5 Fam107b-205ENSMUST00000115055 515 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
Ccdc28bQ8CEG5 Gm15779-201ENSMUST00000117470 412 ntBASIC5□□□□□ -1.61
Ccdc28bQ8CEG5 Gm5073-201ENSMUST00000118222 820 ntBASIC5□□□□□ -1.61
Ccdc28bQ8CEG5 Gm14930-201ENSMUST00000118864 652 ntBASIC5□□□□□ -1.61
Ccdc28bQ8CEG5 Gm7658-201ENSMUST00000119064 1124 ntBASIC5□□□□□ -1.61
Ccdc28bQ8CEG5 Gm7350-201ENSMUST00000120964 636 ntBASIC5□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms