Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Zfyve9-203ENSMUST00000106658 5987 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
Ccdc40Q8BI79 4930435E12Rik-201ENSMUST00000122078 1368 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Ccdc40Q8BI79 5330411O13Rik-201ENSMUST00000205759 1544 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Ccdc40Q8BI79 Gm38590-202ENSMUST00000210654 1803 ntTSL 5 BASIC5.44□□□□□ -1.54
Ccdc40Q8BI79 Gm13089-201ENSMUST00000073532 1807 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Ccdc40Q8BI79 Olfr147-202ENSMUST00000214648 5356 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
Ccdc40Q8BI79 Homer1-208ENSMUST00000109495 813 ntTSL 5 BASIC5.44□□□□□ -1.54
Ccdc40Q8BI79 Gm12768-201ENSMUST00000120055 759 ntBASIC5.44□□□□□ -1.54
Ccdc40Q8BI79 Gm11659-201ENSMUST00000137561 466 ntTSL 3 BASIC5.44□□□□□ -1.54
Ccdc40Q8BI79 Gm13189-201ENSMUST00000138462 252 ntTSL 3 BASIC5.44□□□□□ -1.54
Ccdc40Q8BI79 Gm16725-201ENSMUST00000138744 1253 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Ccdc40Q8BI79 8030443G20Rik-201ENSMUST00000140919 903 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Ccdc40Q8BI79 Gm12111-201ENSMUST00000150073 349 ntTSL 3 BASIC5.44□□□□□ -1.54
Ccdc40Q8BI79 5330429C05Rik-201ENSMUST00000154615 487 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Ccdc40Q8BI79 Gm8988-201ENSMUST00000155015 1240 ntBASIC5.44□□□□□ -1.54
Ccdc40Q8BI79 Gm23539-201ENSMUST00000157537 224 ntBASIC5.44□□□□□ -1.54
Ccdc40Q8BI79 Gm26489-201ENSMUST00000157880 264 ntBASIC5.44□□□□□ -1.54
Ccdc40Q8BI79 Gm26086-201ENSMUST00000157902 263 ntBASIC5.44□□□□□ -1.54
Ccdc40Q8BI79 Scgb1b20-201ENSMUST00000166714 421 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
Ccdc40Q8BI79 Gm9443-201ENSMUST00000188406 816 ntBASIC5.44□□□□□ -1.54
Ccdc40Q8BI79 Il20-202ENSMUST00000188581 465 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Ccdc40Q8BI79 Gm28763-201ENSMUST00000188870 166 ntTSL 5 BASIC5.44□□□□□ -1.54
Ccdc40Q8BI79 Gm29579-201ENSMUST00000190820 166 ntTSL 5 BASIC5.44□□□□□ -1.54
Ccdc40Q8BI79 Gm37187-201ENSMUST00000193425 341 ntBASIC5.44□□□□□ -1.54
Ccdc40Q8BI79 Gm37710-201ENSMUST00000193501 1274 ntBASIC5.44□□□□□ -1.54
Ccdc40Q8BI79 4930405L22Rik-201ENSMUST00000198088 585 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Ccdc40Q8BI79 Mir6906-201ENSMUST00000198998 58 ntBASIC5.44□□□□□ -1.54
Ccdc40Q8BI79 Gm44412-201ENSMUST00000203018 294 ntBASIC5.44□□□□□ -1.54
Ccdc40Q8BI79 Gm8719-201ENSMUST00000203602 534 ntBASIC5.44□□□□□ -1.54
Ccdc40Q8BI79 Tas2r145-ps3-201ENSMUST00000204526 992 ntBASIC5.44□□□□□ -1.54
Ccdc40Q8BI79 Gm45171-201ENSMUST00000206360 736 ntBASIC5.44□□□□□ -1.54
Ccdc40Q8BI79 Gm44969-201ENSMUST00000207829 549 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Ccdc40Q8BI79 Gm44724-203ENSMUST00000208430 998 ntTSL 5 BASIC5.44□□□□□ -1.54
Ccdc40Q8BI79 Gm42397-205ENSMUST00000208692 1449 ntTSL 5 BASIC5.44□□□□□ -1.54
Ccdc40Q8BI79 AC123832.2-201ENSMUST00000215151 129 ntBASIC5.44□□□□□ -1.54
Ccdc40Q8BI79 Olfr915-201ENSMUST00000215191 933 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Ccdc40Q8BI79 Gm3213-201ENSMUST00000219296 441 ntBASIC5.44□□□□□ -1.54
Ccdc40Q8BI79 4930452L12Rik-201ENSMUST00000220158 785 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Ccdc40Q8BI79 AC165260.4-201ENSMUST00000225924 724 ntBASIC5.44□□□□□ -1.54
Ccdc40Q8BI79 AC114572.1-201ENSMUST00000227262 300 ntBASIC5.44□□□□□ -1.54
Ccdc40Q8BI79 Vmn1r87-203ENSMUST00000227443 5319 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Ccdc40Q8BI79 AC122034.1-201ENSMUST00000227641 595 ntBASIC5.44□□□□□ -1.54
Ccdc40Q8BI79 AC164295.2-201ENSMUST00000228539 757 ntBASIC5.44□□□□□ -1.54
Ccdc40Q8BI79 AC154239.1-201ENSMUST00000228565 406 ntBASIC5.44□□□□□ -1.54
Ccdc40Q8BI79 Olfr218-201ENSMUST00000057548 942 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Ccdc40Q8BI79 Olfr510-201ENSMUST00000076289 945 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Ccdc40Q8BI79 Vmn1r52-201ENSMUST00000079832 930 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Ccdc40Q8BI79 Rpl36a-ps1-201ENSMUST00000081987 449 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Ccdc40Q8BI79 Olfr1110-201ENSMUST00000099861 939 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Ccdc40Q8BI79 Zfp967-202ENSMUST00000178443 1458 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
Ccdc40Q8BI79 Zfp969-203ENSMUST00000179061 1458 ntAPPRIS P1 TSL 3 BASIC5.44□□□□□ -1.54
Ccdc40Q8BI79 Ncoa7-202ENSMUST00000092610 2590 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Ccdc40Q8BI79 Gm42436-201ENSMUST00000198804 3656 ntBASIC5.44□□□□□ -1.54
Ccdc40Q8BI79 Pramel5-201ENSMUST00000035757 2147 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Ccdc40Q8BI79 Olfr980-202ENSMUST00000216463 3050 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Ccdc40Q8BI79 Fnbp1l-203ENSMUST00000162947 1830 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Ccdc40Q8BI79 Sdr16c6-201ENSMUST00000095151 1834 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Ccdc40Q8BI79 Zfand6-201ENSMUST00000069537 1658 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Ccdc40Q8BI79 Vmn2r4-201ENSMUST00000170280 2484 ntAPPRIS P2 TSL 5 BASIC5.43□□□□□ -1.54
Ccdc40Q8BI79 Slc10a2-201ENSMUST00000023835 4152 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Ccdc40Q8BI79 1700017N19Rik-210ENSMUST00000218464 1597 ntTSL 5 BASIC5.43□□□□□ -1.54
Ccdc40Q8BI79 Ms4a7-201ENSMUST00000025574 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
Ccdc40Q8BI79 Gm33680-202ENSMUST00000219411 3401 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Ccdc40Q8BI79 Klhl28-203ENSMUST00000222508 6459 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Ccdc40Q8BI79 Vmn2r83-201ENSMUST00000167976 2610 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Ccdc40Q8BI79 4932438A13Rik-217ENSMUST00000152564 15541 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Ccdc40Q8BI79 Gm11032-201ENSMUST00000109941 102 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Ccdc40Q8BI79 Agxt2-203ENSMUST00000110541 1222 ntTSL 2 BASIC5.43□□□□□ -1.54
Ccdc40Q8BI79 Oosp3-202ENSMUST00000119053 621 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Ccdc40Q8BI79 Gm15780-201ENSMUST00000121283 935 ntBASIC5.43□□□□□ -1.54
Ccdc40Q8BI79 n-R5s98-201ENSMUST00000122549 119 ntBASIC5.43□□□□□ -1.54
Ccdc40Q8BI79 4933430M04Rik-201ENSMUST00000152726 744 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Ccdc40Q8BI79 Gm12472-201ENSMUST00000153232 1140 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Ccdc40Q8BI79 Gm22084-201ENSMUST00000157585 105 ntBASIC5.43□□□□□ -1.54
Ccdc40Q8BI79 Gm22730-201ENSMUST00000158085 171 ntBASIC5.43□□□□□ -1.54
Ccdc40Q8BI79 Gm26172-201ENSMUST00000158421 134 ntBASIC5.43□□□□□ -1.54
Ccdc40Q8BI79 AC122858.3-202ENSMUST00000161721 433 ntTSL 5 BASIC5.43□□□□□ -1.54
Ccdc40Q8BI79 AY512915-204ENSMUST00000162315 676 ntTSL 3 BASIC5.43□□□□□ -1.54
Ccdc40Q8BI79 Vmn1r-ps66-201ENSMUST00000173436 612 ntBASIC5.43□□□□□ -1.54
Ccdc40Q8BI79 Gm27602-201ENSMUST00000183861 111 ntBASIC5.43□□□□□ -1.54
Ccdc40Q8BI79 Gm38384-201ENSMUST00000195413 1122 ntBASIC5.43□□□□□ -1.54
Ccdc40Q8BI79 Gm6543-201ENSMUST00000197353 808 ntBASIC5.43□□□□□ -1.54
Ccdc40Q8BI79 Gm43608-201ENSMUST00000197703 687 ntTSL 3 BASIC5.43□□□□□ -1.54
Ccdc40Q8BI79 Gm42504-201ENSMUST00000198312 525 ntTSL 3 BASIC5.43□□□□□ -1.54
Ccdc40Q8BI79 5033403H07Rik-203ENSMUST00000198580 467 ntTSL 2 BASIC5.43□□□□□ -1.54
Ccdc40Q8BI79 Gm18587-201ENSMUST00000213736 841 ntBASIC5.43□□□□□ -1.54
Ccdc40Q8BI79 RMST_1.1-212ENSMUST00000220192 413 ntTSL 3 BASIC5.43□□□□□ -1.54
Ccdc40Q8BI79 Gm9202-201ENSMUST00000223036 437 ntBASIC5.43□□□□□ -1.54
Ccdc40Q8BI79 AC122858.1-201ENSMUST00000226212 433 ntBASIC5.43□□□□□ -1.54
Ccdc40Q8BI79 AC122858.3-201ENSMUST00000226341 740 ntBASIC5.43□□□□□ -1.54
Ccdc40Q8BI79 AC122858.1-202ENSMUST00000228290 986 ntBASIC5.43□□□□□ -1.54
Ccdc40Q8BI79 Olfr734-201ENSMUST00000050928 1033 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Ccdc40Q8BI79 Olfr803-201ENSMUST00000056736 927 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Ccdc40Q8BI79 Olfr1406-201ENSMUST00000072395 1063 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Ccdc40Q8BI79 Olfr477-201ENSMUST00000091605 933 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Ccdc40Q8BI79 Gm8989-201ENSMUST00000184782 7275 ntBASIC5.43□□□□□ -1.54
Ccdc40Q8BI79 Ireb2-201ENSMUST00000034843 5770 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Ccdc40Q8BI79 Ank2-207ENSMUST00000182064 12413 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
Ccdc40Q8BI79 Pgap1-201ENSMUST00000097739 10583 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Ccdc40Q8BI79 Gm14014-201ENSMUST00000156718 2717 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms