Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Gm38062-201ENSMUST00000192541 1856 ntBASIC5.45□□□□□ -1.54
Ubfd1Q78JW9 Slc22a29-201ENSMUST00000113298 2271 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Ubfd1Q78JW9 Catsperg2-201ENSMUST00000061193 3957 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Ubfd1Q78JW9 Olfr721-ps1-203ENSMUST00000215479 3075 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Ubfd1Q78JW9 Prdm9-206ENSMUST00000167994 3460 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Ubfd1Q78JW9 Olfr1281-202ENSMUST00000208176 4905 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
Ubfd1Q78JW9 Gm3115-201ENSMUST00000166928 1797 ntAPPRIS P5 TSL 5 BASIC5.45□□□□□ -1.54
Ubfd1Q78JW9 Gm2888-201ENSMUST00000170521 1758 ntAPPRIS P5 TSL 5 BASIC5.45□□□□□ -1.54
Ubfd1Q78JW9 Gm7876-202ENSMUST00000171305 1758 ntAPPRIS P5 TSL 5 BASIC5.45□□□□□ -1.54
Ubfd1Q78JW9 Gm3127-202ENSMUST00000171866 1758 ntAPPRIS P5 TSL 5 BASIC5.45□□□□□ -1.54
Ubfd1Q78JW9 B530045E10Rik-204ENSMUST00000220146 3244 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Ubfd1Q78JW9 E330034G19Rik-203ENSMUST00000161740 1544 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
Ubfd1Q78JW9 B130006D01Rik-201ENSMUST00000100534 3124 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Ubfd1Q78JW9 Gabra3-201ENSMUST00000055966 3662 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
Ubfd1Q78JW9 Olfr1279-202ENSMUST00000213823 3299 ntAPPRIS ALT1 TSL 5 BASIC5.45□□□□□ -1.54
Ubfd1Q78JW9 Igkv4-92-201ENSMUST00000103332 351 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Ubfd1Q78JW9 Glrb-202ENSMUST00000107743 1101 ntTSL 5 BASIC5.45□□□□□ -1.54
Ubfd1Q78JW9 Fbxo48-202ENSMUST00000109635 1098 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Ubfd1Q78JW9 Gm14931-201ENSMUST00000111079 253 ntBASIC5.45□□□□□ -1.54
Ubfd1Q78JW9 Gm15531-201ENSMUST00000118062 252 ntBASIC5.45□□□□□ -1.54
Ubfd1Q78JW9 Gm11617-201ENSMUST00000119609 639 ntBASIC5.45□□□□□ -1.54
Ubfd1Q78JW9 Gm14267-201ENSMUST00000119751 496 ntBASIC5.45□□□□□ -1.54
Ubfd1Q78JW9 Gm25291-201ENSMUST00000122795 144 ntBASIC5.45□□□□□ -1.54
Ubfd1Q78JW9 4930515L19Rik-201ENSMUST00000152352 769 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Ubfd1Q78JW9 Gm22158-201ENSMUST00000158411 126 ntBASIC5.45□□□□□ -1.54
Ubfd1Q78JW9 Gm5087-203ENSMUST00000161835 814 ntTSL 2 BASIC5.45□□□□□ -1.54
Ubfd1Q78JW9 Gm3242-201ENSMUST00000171273 485 ntBASIC5.45□□□□□ -1.54
Ubfd1Q78JW9 Gypc-201ENSMUST00000172434 612 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
Ubfd1Q78JW9 Gm18397-201ENSMUST00000176704 587 ntBASIC5.45□□□□□ -1.54
Ubfd1Q78JW9 Gm3259-205ENSMUST00000185432 1077 ntTSL 3 BASIC5.45□□□□□ -1.54
Ubfd1Q78JW9 Gm29516-201ENSMUST00000190402 468 ntBASIC5.45□□□□□ -1.54
Ubfd1Q78JW9 Gm17952-201ENSMUST00000193914 747 ntBASIC5.45□□□□□ -1.54
Ubfd1Q78JW9 Gm6321-201ENSMUST00000194460 1090 ntBASIC5.45□□□□□ -1.54
Ubfd1Q78JW9 Gm30275-202ENSMUST00000198124 416 ntTSL 3 BASIC5.45□□□□□ -1.54
Ubfd1Q78JW9 Gm43554-201ENSMUST00000199987 186 ntBASIC5.45□□□□□ -1.54
Ubfd1Q78JW9 AC132384.13-201ENSMUST00000219556 1159 ntBASIC5.45□□□□□ -1.54
Ubfd1Q78JW9 CR974592.1-201ENSMUST00000220422 574 ntBASIC5.45□□□□□ -1.54
Ubfd1Q78JW9 CT009733.1-201ENSMUST00000225322 425 ntBASIC5.45□□□□□ -1.54
Ubfd1Q78JW9 AC154806.3-201ENSMUST00000227376 439 ntBASIC5.45□□□□□ -1.54
Ubfd1Q78JW9 Iapp-201ENSMUST00000041993 839 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Ubfd1Q78JW9 Sprr2d-201ENSMUST00000047477 681 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Ubfd1Q78JW9 Magea4-201ENSMUST00000048675 948 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Ubfd1Q78JW9 BC049715-201ENSMUST00000052702 1120 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Ubfd1Q78JW9 Olfr705-201ENSMUST00000060879 951 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Ubfd1Q78JW9 Olfr161-201ENSMUST00000061541 942 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Ubfd1Q78JW9 Olfr1463-201ENSMUST00000064102 933 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Ubfd1Q78JW9 Vmn1r46-201ENSMUST00000075797 930 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Ubfd1Q78JW9 Rpl38-201ENSMUST00000077915 364 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Ubfd1Q78JW9 Gm24144-201ENSMUST00000082632 111 ntBASIC5.45□□□□□ -1.54
Ubfd1Q78JW9 Defa23-201ENSMUST00000098899 411 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Ubfd1Q78JW9 BB365896-201ENSMUST00000173978 3000 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Ubfd1Q78JW9 Ranbp3l-201ENSMUST00000053308 3017 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Ubfd1Q78JW9 Slfn8-206ENSMUST00000215239 2930 ntTSL 5 BASIC5.45□□□□□ -1.54
Ubfd1Q78JW9 Cts8-201ENSMUST00000021891 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Ubfd1Q78JW9 AC153881.3-201ENSMUST00000218494 1561 ntBASIC5.45□□□□□ -1.54
Ubfd1Q78JW9 Zfp644-201ENSMUST00000045466 5569 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
Ubfd1Q78JW9 Cyp3a16-201ENSMUST00000031633 1730 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Ubfd1Q78JW9 Gm7869-201ENSMUST00000121457 1322 ntBASIC5.45□□□□□ -1.54
Ubfd1Q78JW9 Vmn2r-ps117-201ENSMUST00000176899 2188 ntBASIC5.45□□□□□ -1.54
Ubfd1Q78JW9 Vmn2r-ps94-201ENSMUST00000116665 1456 ntBASIC5.45□□□□□ -1.54
Ubfd1Q78JW9 Fbxw13-201ENSMUST00000061456 1485 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Ubfd1Q78JW9 Slco6d1-201ENSMUST00000027575 2328 ntAPPRIS P4 TSL 1 (best) BASIC5.45□□□□□ -1.54
Ubfd1Q78JW9 Rapgef6-204ENSMUST00000108894 3475 ntTSL 5 BASIC5.44□□□□□ -1.54
Ubfd1Q78JW9 Abcc2-202ENSMUST00000099413 1926 ntBASIC5.44□□□□□ -1.54
Ubfd1Q78JW9 Gm45493-201ENSMUST00000209494 3948 ntBASIC5.44□□□□□ -1.54
Ubfd1Q78JW9 Fmo9-201ENSMUST00000027843 3065 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Ubfd1Q78JW9 Atf2-207ENSMUST00000112017 2396 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Ubfd1Q78JW9 Gm26523-201ENSMUST00000180713 1658 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Ubfd1Q78JW9 Trav14d-3-dv8-201ENSMUST00000103608 456 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Ubfd1Q78JW9 Traj17-201ENSMUST00000103724 63 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Ubfd1Q78JW9 Tex38-201ENSMUST00000106521 802 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Ubfd1Q78JW9 Gm1330-202ENSMUST00000109942 555 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
Ubfd1Q78JW9 4933413L06Rik-201ENSMUST00000110292 809 ntTSL 2 BASIC5.44□□□□□ -1.54
Ubfd1Q78JW9 Il19-202ENSMUST00000112465 880 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Ubfd1Q78JW9 Gm11270-201ENSMUST00000117685 471 ntBASIC5.44□□□□□ -1.54
Ubfd1Q78JW9 Gm15403-201ENSMUST00000119343 1227 ntBASIC5.44□□□□□ -1.54
Ubfd1Q78JW9 Olfr360-201ENSMUST00000120704 954 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Ubfd1Q78JW9 Gm16208-201ENSMUST00000128476 471 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Ubfd1Q78JW9 Gm15130-201ENSMUST00000132464 663 ntAPPRIS P1 TSL 3 BASIC5.44□□□□□ -1.54
Ubfd1Q78JW9 Crem-224ENSMUST00000147138 436 ntTSL 5 BASIC5.44□□□□□ -1.54
Ubfd1Q78JW9 Gm11636-201ENSMUST00000152172 774 ntTSL 2 BASIC5.44□□□□□ -1.54
Ubfd1Q78JW9 Gm14330-201ENSMUST00000155455 455 ntTSL 5 BASIC5.44□□□□□ -1.54
Ubfd1Q78JW9 Gm26352-201ENSMUST00000158223 125 ntBASIC5.44□□□□□ -1.54
Ubfd1Q78JW9 Spink14-202ENSMUST00000162265 542 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Ubfd1Q78JW9 Il19-201ENSMUST00000016668 1021 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Ubfd1Q78JW9 Vmn2r-ps72-201ENSMUST00000172586 907 ntBASIC5.44□□□□□ -1.54
Ubfd1Q78JW9 Mir3110-201ENSMUST00000175053 80 ntBASIC5.44□□□□□ -1.54
Ubfd1Q78JW9 Vmn1r-ps11-201ENSMUST00000176097 853 ntBASIC5.44□□□□□ -1.54
Ubfd1Q78JW9 Gm20795-201ENSMUST00000178528 699 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Ubfd1Q78JW9 Gm27754-201ENSMUST00000183340 126 ntBASIC5.44□□□□□ -1.54
Ubfd1Q78JW9 V1rg10-201ENSMUST00000183378 937 ntBASIC5.44□□□□□ -1.54
Ubfd1Q78JW9 Gm27225-201ENSMUST00000183833 557 ntBASIC5.44□□□□□ -1.54
Ubfd1Q78JW9 Gm38040-201ENSMUST00000193505 225 ntBASIC5.44□□□□□ -1.54
Ubfd1Q78JW9 Gm17935-201ENSMUST00000196649 772 ntBASIC5.44□□□□□ -1.54
Ubfd1Q78JW9 6030400A10Rik-201ENSMUST00000199734 1212 ntBASIC5.44□□□□□ -1.54
Ubfd1Q78JW9 Gm16513-202ENSMUST00000201663 2485 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Ubfd1Q78JW9 1810017P11Rik-201ENSMUST00000202592 558 ntBASIC5.44□□□□□ -1.54
Ubfd1Q78JW9 Gm3257-201ENSMUST00000207217 675 ntBASIC5.44□□□□□ -1.54
Ubfd1Q78JW9 Gm46102-201ENSMUST00000217005 731 ntTSL 5 BASIC5.44□□□□□ -1.54
Ubfd1Q78JW9 Olfr417-203ENSMUST00000220394 6080 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms