Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Gm12641-201ENSMUST00000117874 985 ntBASIC6.3□□□□□ -1.4
Ddx55Q6ZPL9 Gm14739-201ENSMUST00000120424 802 ntBASIC6.3□□□□□ -1.4
Ddx55Q6ZPL9 Gm15120-201ENSMUST00000120602 301 ntBASIC6.3□□□□□ -1.4
Ddx55Q6ZPL9 Gm15892-203ENSMUST00000156149 1001 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Ddx55Q6ZPL9 Gm22311-201ENSMUST00000158006 110 ntBASIC6.3□□□□□ -1.4
Ddx55Q6ZPL9 Gm17121-201ENSMUST00000170414 847 ntBASIC6.3□□□□□ -1.4
Ddx55Q6ZPL9 Gm22392-201ENSMUST00000177971 107 ntBASIC6.3□□□□□ -1.4
Ddx55Q6ZPL9 Gm21882-201ENSMUST00000178332 1083 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Ddx55Q6ZPL9 Gm17222-201ENSMUST00000180135 847 ntBASIC6.3□□□□□ -1.4
Ddx55Q6ZPL9 A430093F15Rik-206ENSMUST00000189565 651 ntTSL 3 BASIC6.3□□□□□ -1.4
Ddx55Q6ZPL9 Gm28792-201ENSMUST00000191482 419 ntTSL 3 BASIC6.3□□□□□ -1.4
Ddx55Q6ZPL9 Gm38213-201ENSMUST00000193203 173 ntBASIC6.3□□□□□ -1.4
Ddx55Q6ZPL9 Gm9238-201ENSMUST00000196181 329 ntBASIC6.3□□□□□ -1.4
Ddx55Q6ZPL9 Gm43476-201ENSMUST00000197873 405 ntBASIC6.3□□□□□ -1.4
Ddx55Q6ZPL9 Gm43157-201ENSMUST00000198223 412 ntBASIC6.3□□□□□ -1.4
Ddx55Q6ZPL9 Gm19253-201ENSMUST00000204279 307 ntBASIC6.3□□□□□ -1.4
Ddx55Q6ZPL9 Snhg1-211ENSMUST00000206155 605 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Ddx55Q6ZPL9 Gm44972-201ENSMUST00000206419 406 ntBASIC6.3□□□□□ -1.4
Ddx55Q6ZPL9 Gm6362-201ENSMUST00000217686 836 ntBASIC6.3□□□□□ -1.4
Ddx55Q6ZPL9 Vmn2r-ps92-201ENSMUST00000220242 388 ntBASIC6.3□□□□□ -1.4
Ddx55Q6ZPL9 AC163646.1-201ENSMUST00000227704 397 ntBASIC6.3□□□□□ -1.4
Ddx55Q6ZPL9 Gm10112-201ENSMUST00000075226 354 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Ddx55Q6ZPL9 Vmn1r234-201ENSMUST00000079633 990 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Ddx55Q6ZPL9 Vmn1r52-201ENSMUST00000079832 930 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Ddx55Q6ZPL9 Gm23448-201ENSMUST00000083151 104 ntBASIC6.3□□□□□ -1.4
Ddx55Q6ZPL9 Gm22741-201ENSMUST00000083438 165 ntBASIC6.3□□□□□ -1.4
Ddx55Q6ZPL9 Olfr199-201ENSMUST00000099657 931 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Ddx55Q6ZPL9 Gm21122-201ENSMUST00000191548 3452 ntBASIC6.3□□□□□ -1.4
Ddx55Q6ZPL9 Olfr701-203ENSMUST00000217739 4100 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ddx55Q6ZPL9 Vmn1r201-203ENSMUST00000226965 4741 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Ddx55Q6ZPL9 Cyp2c70-201ENSMUST00000051846 1717 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ddx55Q6ZPL9 Ulbp1-202ENSMUST00000177585 3815 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ddx55Q6ZPL9 Cept1-201ENSMUST00000039153 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ddx55Q6ZPL9 Olfr1336-202ENSMUST00000214301 6882 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Ddx55Q6ZPL9 Gm37106-201ENSMUST00000193760 1532 ntBASIC6.3□□□□□ -1.4
Ddx55Q6ZPL9 AC165273.1-201ENSMUST00000222780 2452 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Ddx55Q6ZPL9 Baz2b-202ENSMUST00000112550 7895 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Ddx55Q6ZPL9 Asah2-201ENSMUST00000096119 4682 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Ddx55Q6ZPL9 Gm6866-202ENSMUST00000206653 3081 ntTSL 5 BASIC6.29□□□□□ -1.4
Ddx55Q6ZPL9 AC154552.6-201ENSMUST00000221365 1342 ntBASIC6.29□□□□□ -1.4
Ddx55Q6ZPL9 Akap4-202ENSMUST00000115750 3021 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Ddx55Q6ZPL9 Cdh17-201ENSMUST00000029871 3462 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ddx55Q6ZPL9 Lcp2-201ENSMUST00000052413 3644 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ddx55Q6ZPL9 Cyp2c65-201ENSMUST00000087236 1928 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ddx55Q6ZPL9 Olfr670-202ENSMUST00000214216 3729 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Ddx55Q6ZPL9 Brd8-203ENSMUST00000115765 3869 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Ddx55Q6ZPL9 Gm25293-201ENSMUST00000122792 285 ntBASIC6.29□□□□□ -1.4
Ddx55Q6ZPL9 Rrm2b-203ENSMUST00000137636 900 ntTSL 5 BASIC6.29□□□□□ -1.4
Ddx55Q6ZPL9 Xaf1-202ENSMUST00000140842 651 ntTSL 3 BASIC6.29□□□□□ -1.4
Ddx55Q6ZPL9 Gm25713-201ENSMUST00000158625 109 ntBASIC6.29□□□□□ -1.4
Ddx55Q6ZPL9 Gm23700-201ENSMUST00000158842 102 ntBASIC6.29□□□□□ -1.4
Ddx55Q6ZPL9 Spink14-202ENSMUST00000162265 542 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ddx55Q6ZPL9 C130026I21Rik-207ENSMUST00000162421 591 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ddx55Q6ZPL9 Gm17223-201ENSMUST00000171413 481 ntBASIC6.29□□□□□ -1.4
Ddx55Q6ZPL9 Gm5594-201ENSMUST00000172712 1429 ntBASIC6.29□□□□□ -1.4
Ddx55Q6ZPL9 Vmn1r-ps66-201ENSMUST00000173436 612 ntBASIC6.29□□□□□ -1.4
Ddx55Q6ZPL9 Gm20523-201ENSMUST00000174340 1124 ntBASIC6.29□□□□□ -1.4
Ddx55Q6ZPL9 Gm27234-201ENSMUST00000183362 581 ntTSL 5 BASIC6.29□□□□□ -1.4
Ddx55Q6ZPL9 Pou6f2-206ENSMUST00000184299 793 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ddx55Q6ZPL9 Gm28103-201ENSMUST00000188392 416 ntTSL 5 BASIC6.29□□□□□ -1.4
Ddx55Q6ZPL9 Gm19029-201ENSMUST00000189923 564 ntBASIC6.29□□□□□ -1.4
Ddx55Q6ZPL9 Gm28137-201ENSMUST00000191478 416 ntTSL 5 BASIC6.29□□□□□ -1.4
Ddx55Q6ZPL9 Mir1892-201ENSMUST00000197752 80 ntBASIC6.29□□□□□ -1.4
Ddx55Q6ZPL9 Gm18748-201ENSMUST00000198507 622 ntBASIC6.29□□□□□ -1.4
Ddx55Q6ZPL9 5033403H07Rik-203ENSMUST00000198580 467 ntTSL 2 BASIC6.29□□□□□ -1.4
Ddx55Q6ZPL9 Gm2622-201ENSMUST00000200018 471 ntBASIC6.29□□□□□ -1.4
Ddx55Q6ZPL9 Tas2r145-ps3-201ENSMUST00000204526 992 ntBASIC6.29□□□□□ -1.4
Ddx55Q6ZPL9 Gm44259-201ENSMUST00000204996 298 ntBASIC6.29□□□□□ -1.4
Ddx55Q6ZPL9 Gm6230-201ENSMUST00000208077 780 ntBASIC6.29□□□□□ -1.4
Ddx55Q6ZPL9 Gm7706-202ENSMUST00000211278 590 ntTSL 3 BASIC6.29□□□□□ -1.4
Ddx55Q6ZPL9 AC171206.1-201ENSMUST00000213612 213 ntBASIC6.29□□□□□ -1.4
Ddx55Q6ZPL9 Gm1715-201ENSMUST00000213681 1018 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Ddx55Q6ZPL9 Lilrb4a-205ENSMUST00000217705 1142 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Ddx55Q6ZPL9 AC153505.2-201ENSMUST00000217741 277 ntBASIC6.29□□□□□ -1.4
Ddx55Q6ZPL9 5330439M10Rik-201ENSMUST00000218667 348 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Ddx55Q6ZPL9 Gnrh1-203ENSMUST00000223951 411 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Ddx55Q6ZPL9 AC154657.1-201ENSMUST00000226394 775 ntBASIC6.29□□□□□ -1.4
Ddx55Q6ZPL9 Olfr1341-201ENSMUST00000061215 939 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Ddx55Q6ZPL9 Atp12a-201ENSMUST00000007340 3950 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ddx55Q6ZPL9 Olfr114-201ENSMUST00000076914 1000 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Ddx55Q6ZPL9 Gm24917-201ENSMUST00000083935 104 ntBASIC6.29□□□□□ -1.4
Ddx55Q6ZPL9 Mfap3-203ENSMUST00000108849 4827 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ddx55Q6ZPL9 Mug1-201ENSMUST00000032228 4657 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ddx55Q6ZPL9 Olfr312-202ENSMUST00000216407 3776 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Ddx55Q6ZPL9 Erap1-201ENSMUST00000169114 5644 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ddx55Q6ZPL9 Ube2u-202ENSMUST00000133493 1537 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ddx55Q6ZPL9 Naip5-201ENSMUST00000049789 5204 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ddx55Q6ZPL9 Psg-ps1-202ENSMUST00000206181 1943 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Ddx55Q6ZPL9 Gm42756-201ENSMUST00000196601 2614 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Ddx55Q6ZPL9 Gm42681-201ENSMUST00000197999 1611 ntBASIC6.28□□□□□ -1.4
Ddx55Q6ZPL9 Gm37342-201ENSMUST00000194588 4965 ntBASIC6.28□□□□□ -1.4
Ddx55Q6ZPL9 Prom1-216ENSMUST00000197750 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ddx55Q6ZPL9 Mndal-204ENSMUST00000188804 2026 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ddx55Q6ZPL9 Cbx5-201ENSMUST00000108813 3661 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ddx55Q6ZPL9 Sh3kbp1-202ENSMUST00000080394 2980 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Ddx55Q6ZPL9 Ercc6l-201ENSMUST00000056904 5302 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ddx55Q6ZPL9 Il18rap-201ENSMUST00000027237 4889 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ddx55Q6ZPL9 Vmn1r52-206ENSMUST00000228385 2769 ntBASIC6.28□□□□□ -1.4
Ddx55Q6ZPL9 Olfr1499-202ENSMUST00000216659 1834 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Ddx55Q6ZPL9 Gm35940-201ENSMUST00000213355 4797 ntTSL 5 BASIC6.28□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms