Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm44048-201ENSMUST00000204531 361 ntBASIC5.03□□□□□ -1.6
Trafd1Q3UDK1 Gm17984-201ENSMUST00000205286 859 ntBASIC5.03□□□□□ -1.6
Trafd1Q3UDK1 4930405G09Rik-201ENSMUST00000207912 1060 ntBASIC5.03□□□□□ -1.6
Trafd1Q3UDK1 AC137127.3-201ENSMUST00000213340 349 ntBASIC5.03□□□□□ -1.6
Trafd1Q3UDK1 Gm18904-201ENSMUST00000218756 329 ntBASIC5.03□□□□□ -1.6
Trafd1Q3UDK1 AC153961.2-201ENSMUST00000218877 164 ntBASIC5.03□□□□□ -1.6
Trafd1Q3UDK1 Fam228b-208ENSMUST00000219898 288 ntAPPRIS ALT2 TSL 3 BASIC5.03□□□□□ -1.6
Trafd1Q3UDK1 CT030182.2-201ENSMUST00000223569 620 ntBASIC5.03□□□□□ -1.6
Trafd1Q3UDK1 2310061N02Rik-201ENSMUST00000050882 794 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Trafd1Q3UDK1 1110012L19Rik-201ENSMUST00000053981 1094 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Trafd1Q3UDK1 Olfr1257-201ENSMUST00000060795 1016 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Trafd1Q3UDK1 Olfr248-201ENSMUST00000075329 1010 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Trafd1Q3UDK1 Olfr586-201ENSMUST00000084811 954 ntAPPRIS P2 BASIC5.03□□□□□ -1.6
Trafd1Q3UDK1 Cep57l1-201ENSMUST00000019951 2177 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
Trafd1Q3UDK1 Gm3115-201ENSMUST00000166928 1797 ntAPPRIS P5 TSL 5 BASIC5.03□□□□□ -1.6
Trafd1Q3UDK1 Cdh10-202ENSMUST00000166873 3176 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Trafd1Q3UDK1 Fat1-206ENSMUST00000215588 13938 ntTSL 5 BASIC5.03□□□□□ -1.6
Trafd1Q3UDK1 Cpa6-201ENSMUST00000035577 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Trafd1Q3UDK1 Adam25-201ENSMUST00000096663 2621 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Trafd1Q3UDK1 Tmem67-201ENSMUST00000050686 3456 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Trafd1Q3UDK1 Gm13928-201ENSMUST00000120326 1732 ntBASIC5.03□□□□□ -1.6
Trafd1Q3UDK1 Gm26743-201ENSMUST00000180913 1726 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Trafd1Q3UDK1 AC154368.2-201ENSMUST00000222334 1724 ntBASIC5.03□□□□□ -1.6
Trafd1Q3UDK1 Prrg1-210ENSMUST00000177904 3851 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
Trafd1Q3UDK1 Akap4-202ENSMUST00000115750 3021 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
Trafd1Q3UDK1 Obox5-201ENSMUST00000098802 1831 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Trafd1Q3UDK1 Zfp120-201ENSMUST00000089207 4127 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Trafd1Q3UDK1 Gm16070-202ENSMUST00000149914 2146 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Trafd1Q3UDK1 Gm16794-201ENSMUST00000180727 2100 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Trafd1Q3UDK1 Vmn1r235-201ENSMUST00000060603 1781 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Trafd1Q3UDK1 Gm13023-202ENSMUST00000105770 833 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
Trafd1Q3UDK1 Olfr1159-ps1-201ENSMUST00000117651 913 ntBASIC5.02□□□□□ -1.61
Trafd1Q3UDK1 Defa-ps14-201ENSMUST00000121373 418 ntBASIC5.02□□□□□ -1.61
Trafd1Q3UDK1 Gtsf1-202ENSMUST00000123724 747 ntTSL 5 BASIC5.02□□□□□ -1.61
Trafd1Q3UDK1 Gtsf1-204ENSMUST00000136480 767 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
Trafd1Q3UDK1 C030037F17Rik-201ENSMUST00000155211 406 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Trafd1Q3UDK1 Skint1-204ENSMUST00000162158 1260 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Trafd1Q3UDK1 Bhlhe40-202ENSMUST00000163617 476 ntTSL 2 BASIC5.02□□□□□ -1.61
Trafd1Q3UDK1 Mir3062-201ENSMUST00000174986 105 ntBASIC5.02□□□□□ -1.61
Trafd1Q3UDK1 Gm28683-201ENSMUST00000187134 615 ntBASIC5.02□□□□□ -1.61
Trafd1Q3UDK1 1700111N16Rik-201ENSMUST00000188663 1133 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Trafd1Q3UDK1 Gm28840-205ENSMUST00000189320 615 ntBASIC5.02□□□□□ -1.61
Trafd1Q3UDK1 C4bp-ps1-201ENSMUST00000189393 706 ntBASIC5.02□□□□□ -1.61
Trafd1Q3UDK1 Gm28835-203ENSMUST00000190062 615 ntBASIC5.02□□□□□ -1.61
Trafd1Q3UDK1 Gm37614-201ENSMUST00000195645 210 ntBASIC5.02□□□□□ -1.61
Trafd1Q3UDK1 Gm42542-201ENSMUST00000197978 268 ntBASIC5.02□□□□□ -1.61
Trafd1Q3UDK1 Tmem243-203ENSMUST00000198935 849 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Trafd1Q3UDK1 Gm45215-201ENSMUST00000206407 395 ntBASIC5.02□□□□□ -1.61
Trafd1Q3UDK1 AC164567.4-201ENSMUST00000219708 483 ntBASIC5.02□□□□□ -1.61
Trafd1Q3UDK1 Gm40271-201ENSMUST00000221752 422 ntTSL 3 BASIC5.02□□□□□ -1.61
Trafd1Q3UDK1 3830408C21Rik-203ENSMUST00000224293 822 ntBASIC5.02□□□□□ -1.61
Trafd1Q3UDK1 AC154484.2-201ENSMUST00000228359 818 ntBASIC5.02□□□□□ -1.61
Trafd1Q3UDK1 C130073F10Rik-201ENSMUST00000051043 913 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Trafd1Q3UDK1 Mrgprb3-201ENSMUST00000094383 1009 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Trafd1Q3UDK1 Olfr1471-201ENSMUST00000096203 945 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Trafd1Q3UDK1 Olfr198-202ENSMUST00000208244 2200 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
Trafd1Q3UDK1 Mysm1-201ENSMUST00000075872 7420 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Trafd1Q3UDK1 AC122382.2-201ENSMUST00000225128 3602 ntBASIC5.02□□□□□ -1.61
Trafd1Q3UDK1 Postn-202ENSMUST00000081564 2670 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
Trafd1Q3UDK1 C130073E24Rik-202ENSMUST00000211313 14112 ntTSL 5 BASIC5.02□□□□□ -1.61
Trafd1Q3UDK1 Gm11743-201ENSMUST00000117385 1735 ntBASIC5.02□□□□□ -1.61
Trafd1Q3UDK1 Olfr228-202ENSMUST00000217292 1854 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Trafd1Q3UDK1 Olfr1279-203ENSMUST00000216697 3385 ntAPPRIS ALT1 TSL 5 BASIC5.02□□□□□ -1.61
Trafd1Q3UDK1 Zfp65-201ENSMUST00000073157 3957 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Trafd1Q3UDK1 Gm15189-201ENSMUST00000121164 1966 ntBASIC5.02□□□□□ -1.61
Trafd1Q3UDK1 Ankar-202ENSMUST00000211837 4543 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Trafd1Q3UDK1 Gcnt3-201ENSMUST00000034751 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Trafd1Q3UDK1 Gm26582-201ENSMUST00000181481 3135 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Trafd1Q3UDK1 Gm43266-201ENSMUST00000201049 1771 ntBASIC5.01□□□□□ -1.61
Trafd1Q3UDK1 Serpinb3b-202ENSMUST00000166100 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Trafd1Q3UDK1 Gm28394-201ENSMUST00000186805 1495 ntTSL 5 BASIC5.01□□□□□ -1.61
Trafd1Q3UDK1 Gm28570-201ENSMUST00000188300 1495 ntTSL 5 BASIC5.01□□□□□ -1.61
Trafd1Q3UDK1 Kcnt2-202ENSMUST00000120709 5790 ntTSL 5 BASIC5.01□□□□□ -1.61
Trafd1Q3UDK1 Vmn2r109-201ENSMUST00000167093 2577 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Trafd1Q3UDK1 Nlgn1-202ENSMUST00000108308 4272 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
Trafd1Q3UDK1 Cts3-201ENSMUST00000054702 1442 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Trafd1Q3UDK1 Prune2-201ENSMUST00000087689 12512 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Trafd1Q3UDK1 Olfr695-201ENSMUST00000216868 3953 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Trafd1Q3UDK1 Trbv12-1-201ENSMUST00000103267 389 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Trafd1Q3UDK1 Cnep1r1-202ENSMUST00000117775 728 ntTSL 3 BASIC5.01□□□□□ -1.61
Trafd1Q3UDK1 Olfr337-ps1-201ENSMUST00000120380 456 ntBASIC5.01□□□□□ -1.61
Trafd1Q3UDK1 Gm7879-201ENSMUST00000122204 774 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Trafd1Q3UDK1 St8sia3os-201ENSMUST00000123473 652 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Trafd1Q3UDK1 Gm12336-201ENSMUST00000125962 322 ntTSL 3 BASIC5.01□□□□□ -1.61
Trafd1Q3UDK1 Gm11466-201ENSMUST00000148017 291 ntTSL 3 BASIC5.01□□□□□ -1.61
Trafd1Q3UDK1 Gm15647-201ENSMUST00000160178 691 ntTSL 3 BASIC5.01□□□□□ -1.61
Trafd1Q3UDK1 Gm4831-201ENSMUST00000174626 594 ntBASIC5.01□□□□□ -1.61
Trafd1Q3UDK1 Gm27543-201ENSMUST00000183562 177 ntBASIC5.01□□□□□ -1.61
Trafd1Q3UDK1 4930598F16Rik-201ENSMUST00000187352 761 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Trafd1Q3UDK1 Gm36983-201ENSMUST00000192280 1102 ntBASIC5.01□□□□□ -1.61
Trafd1Q3UDK1 Ighv1-19-1-201ENSMUST00000192823 351 ntBASIC5.01□□□□□ -1.61
Trafd1Q3UDK1 Ighv1-35-201ENSMUST00000195265 351 ntBASIC5.01□□□□□ -1.61
Trafd1Q3UDK1 Gm42814-201ENSMUST00000199370 460 ntBASIC5.01□□□□□ -1.61
Trafd1Q3UDK1 Gm44281-201ENSMUST00000203090 166 ntBASIC5.01□□□□□ -1.61
Trafd1Q3UDK1 4930434O05Rik-201ENSMUST00000203259 387 ntBASIC5.01□□□□□ -1.61
Trafd1Q3UDK1 Gm31749-201ENSMUST00000206873 598 ntTSL 3 BASIC5.01□□□□□ -1.61
Trafd1Q3UDK1 Cd209a-204ENSMUST00000208960 844 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
Trafd1Q3UDK1 AC138284.2-201ENSMUST00000213982 567 ntBASIC5.01□□□□□ -1.61
Trafd1Q3UDK1 AC164624.1-201ENSMUST00000219148 1025 ntTSL 5 BASIC5.01□□□□□ -1.61
Trafd1Q3UDK1 Gm272-201ENSMUST00000222073 919 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms