Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Vmn1r46-201ENSMUST00000075797 930 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Ebf1Q07802 Vmn1r52-201ENSMUST00000079832 930 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Ebf1Q07802 Spint3-201ENSMUST00000099097 557 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ebf1Q07802 Sh3d19-201ENSMUST00000107664 6414 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ebf1Q07802 Osbpl9-213ENSMUST00000160271 2604 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Ebf1Q07802 Gm45520-201ENSMUST00000210109 2031 ntBASIC6.14□□□□□ -1.43
Ebf1Q07802 Olfr350-202ENSMUST00000214457 2022 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Ebf1Q07802 Jade3-202ENSMUST00000115384 4866 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ebf1Q07802 Foxp2-201ENSMUST00000031545 5647 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ebf1Q07802 Gm36888-201ENSMUST00000195819 2945 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Ebf1Q07802 Gm37876-201ENSMUST00000194490 1591 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Ebf1Q07802 Omd-201ENSMUST00000065494 1556 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ebf1Q07802 Arhgap32-203ENSMUST00000174641 13568 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Ebf1Q07802 Gm42544-201ENSMUST00000197868 3242 ntBASIC6.14□□□□□ -1.43
Ebf1Q07802 Gm46430-206ENSMUST00000222064 1647 ntTSL 3 BASIC6.14□□□□□ -1.43
Ebf1Q07802 Cdh17-202ENSMUST00000108303 3287 ntTSL 2 BASIC6.14□□□□□ -1.43
Ebf1Q07802 Gm45633-201ENSMUST00000210669 3253 ntBASIC6.14□□□□□ -1.43
Ebf1Q07802 Enpp2-202ENSMUST00000167541 2664 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ebf1Q07802 CT033783.1-201ENSMUST00000220881 2884 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Ebf1Q07802 Gm7969-201ENSMUST00000221347 2884 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Ebf1Q07802 CT033783.2-201ENSMUST00000222807 2884 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Ebf1Q07802 Trim30d-201ENSMUST00000033211 1904 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ebf1Q07802 Iqca-201ENSMUST00000113094 3210 ntAPPRIS P2 TSL 5 BASIC6.13□□□□□ -1.43
Ebf1Q07802 Gm38284-201ENSMUST00000194803 4539 ntBASIC6.13□□□□□ -1.43
Ebf1Q07802 Kif2a-204ENSMUST00000122233 3533 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Ebf1Q07802 Gm38299-201ENSMUST00000193214 3789 ntBASIC6.13□□□□□ -1.43
Ebf1Q07802 Btf3l4-202ENSMUST00000102740 624 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Ebf1Q07802 Igkv11-125-201ENSMUST00000103311 350 ntAPPRIS ALT2 BASIC6.13□□□□□ -1.43
Ebf1Q07802 Gm25919-201ENSMUST00000104271 132 ntBASIC6.13□□□□□ -1.43
Ebf1Q07802 Gm23910-201ENSMUST00000104597 132 ntBASIC6.13□□□□□ -1.43
Ebf1Q07802 Defb42-202ENSMUST00000111203 567 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
Ebf1Q07802 Gm15766-201ENSMUST00000118025 813 ntBASIC6.13□□□□□ -1.43
Ebf1Q07802 Gm12189-201ENSMUST00000119779 912 ntBASIC6.13□□□□□ -1.43
Ebf1Q07802 Gm15786-201ENSMUST00000121079 450 ntBASIC6.13□□□□□ -1.43
Ebf1Q07802 Gm12399-201ENSMUST00000121475 446 ntBASIC6.13□□□□□ -1.43
Ebf1Q07802 Gm12396-201ENSMUST00000121600 306 ntBASIC6.13□□□□□ -1.43
Ebf1Q07802 Klra13-ps-201ENSMUST00000125813 802 ntBASIC6.13□□□□□ -1.43
Ebf1Q07802 Amy2a1-201ENSMUST00000132353 890 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
Ebf1Q07802 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC6.13□□□□□ -1.43
Ebf1Q07802 B230118H07Rik-208ENSMUST00000160037 1139 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ebf1Q07802 Gm8374-201ENSMUST00000163826 672 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Ebf1Q07802 Vmn1r-ps64-201ENSMUST00000173746 655 ntBASIC6.13□□□□□ -1.43
Ebf1Q07802 Mir5125-201ENSMUST00000175240 79 ntBASIC6.13□□□□□ -1.43
Ebf1Q07802 Gm1972-201ENSMUST00000181606 964 ntBASIC6.13□□□□□ -1.43
Ebf1Q07802 Gm26992-201ENSMUST00000182089 468 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
Ebf1Q07802 Gm27167-201ENSMUST00000183752 511 ntTSL 3 BASIC6.13□□□□□ -1.43
Ebf1Q07802 Gm27208-201ENSMUST00000184323 604 ntTSL 3 BASIC6.13□□□□□ -1.43
Ebf1Q07802 4930519F24Rik-201ENSMUST00000185764 579 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Ebf1Q07802 Tmem167-ps1-201ENSMUST00000191236 214 ntBASIC6.13□□□□□ -1.43
Ebf1Q07802 Gm38329-201ENSMUST00000193473 427 ntBASIC6.13□□□□□ -1.43
Ebf1Q07802 Gm42850-201ENSMUST00000202094 201 ntBASIC6.13□□□□□ -1.43
Ebf1Q07802 Gm7890-201ENSMUST00000204877 601 ntBASIC6.13□□□□□ -1.43
Ebf1Q07802 1700110I07Rik-201ENSMUST00000205487 726 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Ebf1Q07802 Gm5027-201ENSMUST00000206700 375 ntBASIC6.13□□□□□ -1.43
Ebf1Q07802 AC138284.2-201ENSMUST00000213982 567 ntBASIC6.13□□□□□ -1.43
Ebf1Q07802 AC121264.1-201ENSMUST00000214412 269 ntTSL 5 BASIC6.13□□□□□ -1.43
Ebf1Q07802 Gm46192-201ENSMUST00000217894 326 ntBASIC6.13□□□□□ -1.43
Ebf1Q07802 AC079644.1-201ENSMUST00000220586 405 ntBASIC6.13□□□□□ -1.43
Ebf1Q07802 Gm4052-201ENSMUST00000220890 451 ntBASIC6.13□□□□□ -1.43
Ebf1Q07802 Prl2c2-203ENSMUST00000221612 596 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Ebf1Q07802 AC165260.1-201ENSMUST00000224127 683 ntBASIC6.13□□□□□ -1.43
Ebf1Q07802 AC163295.1-201ENSMUST00000227840 314 ntBASIC6.13□□□□□ -1.43
Ebf1Q07802 Gm5830-201ENSMUST00000049117 443 ntBASIC6.13□□□□□ -1.43
Ebf1Q07802 Klra6-201ENSMUST00000074056 1116 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ebf1Q07802 Gm28392-201ENSMUST00000077630 393 ntBASIC6.13□□□□□ -1.43
Ebf1Q07802 Ankrd17-205ENSMUST00000197021 8067 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Ebf1Q07802 Eps15-207ENSMUST00000175776 2802 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Ebf1Q07802 Gm11885-201ENSMUST00000118473 1428 ntBASIC6.13□□□□□ -1.43
Ebf1Q07802 Olfr495-201ENSMUST00000210990 1440 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Ebf1Q07802 Gm11346-204ENSMUST00000149751 2893 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Ebf1Q07802 Gm10603-202ENSMUST00000184420 4520 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Ebf1Q07802 Gm18880-201ENSMUST00000223333 1541 ntBASIC6.13□□□□□ -1.43
Ebf1Q07802 Filip1l-201ENSMUST00000099667 1576 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Ebf1Q07802 Ppip5k2-205ENSMUST00000171129 3425 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ebf1Q07802 Zscan4b-201ENSMUST00000168158 1754 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Ebf1Q07802 Vmn2r44-201ENSMUST00000166499 3660 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Ebf1Q07802 Vmn1r196-205ENSMUST00000228557 5790 ntAPPRIS P2 BASIC6.13□□□□□ -1.43
Ebf1Q07802 Olfr530-202ENSMUST00000216727 1958 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Ebf1Q07802 Atp12a-201ENSMUST00000007340 3950 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ebf1Q07802 Nedd4-207ENSMUST00000184333 4034 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Ebf1Q07802 Shoc2-202ENSMUST00000169861 4065 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ebf1Q07802 Gm43788-201ENSMUST00000201539 2417 ntBASIC6.13□□□□□ -1.43
Ebf1Q07802 Nexn-201ENSMUST00000046045 2564 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Ebf1Q07802 Gm34481-201ENSMUST00000214968 3374 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Ebf1Q07802 Tmem74-201ENSMUST00000067469 3528 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Ebf1Q07802 Slc9a4-201ENSMUST00000027233 3962 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Ebf1Q07802 Olfr237-ps1-203ENSMUST00000216411 4115 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Ebf1Q07802 Lrrc37a-201ENSMUST00000153273 9647 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Ebf1Q07802 Olfr351-201ENSMUST00000100150 933 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Ebf1Q07802 Tmprss11a-201ENSMUST00000101073 2657 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Ebf1Q07802 Vrk2-202ENSMUST00000109504 1642 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Ebf1Q07802 Nxf7-202ENSMUST00000113163 2233 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Ebf1Q07802 Rpl38-ps1-201ENSMUST00000117723 215 ntBASIC6.12□□□□□ -1.43
Ebf1Q07802 Gm14887-201ENSMUST00000119522 663 ntBASIC6.12□□□□□ -1.43
Ebf1Q07802 Gm13574-201ENSMUST00000120482 394 ntBASIC6.12□□□□□ -1.43
Ebf1Q07802 Olfr1027-ps1-201ENSMUST00000122338 875 ntBASIC6.12□□□□□ -1.43
Ebf1Q07802 Gm15367-201ENSMUST00000122398 1016 ntBASIC6.12□□□□□ -1.43
Ebf1Q07802 Noct-202ENSMUST00000144826 9797 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Ebf1Q07802 Il2ra-202ENSMUST00000150890 1013 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Ebf1Q07802 A230108P19Rik-201ENSMUST00000151782 2500 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 97.6 ms