Protein–RNA interactions for Protein: P70362

Ufd1, Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1P70362 Gm45721-201ENSMUST00000212267 607 ntTSL 3 BASIC4.33□□□□□ -1.72
Ufd1P70362 AC153821.1-201ENSMUST00000217893 581 ntTSL 2 BASIC4.33□□□□□ -1.72
Ufd1P70362 AC153516.1-201ENSMUST00000217955 779 ntBASIC4.33□□□□□ -1.72
Ufd1P70362 Gm6171-201ENSMUST00000220760 645 ntBASIC4.33□□□□□ -1.72
Ufd1P70362 4930549C15Rik-201ENSMUST00000221235 1260 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Ufd1P70362 Gm40662-201ENSMUST00000222208 453 ntTSL 5 BASIC4.33□□□□□ -1.72
Ufd1P70362 Gm40662-202ENSMUST00000222263 487 ntTSL 5 BASIC4.33□□□□□ -1.72
Ufd1P70362 AC126253.2-201ENSMUST00000226518 205 ntBASIC4.33□□□□□ -1.72
Ufd1P70362 Mmp12-202ENSMUST00000065079 1185 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Ufd1P70362 AC127371.2-201ENSMUST00000228108 1933 ntBASIC4.33□□□□□ -1.72
Ufd1P70362 BC051142-201ENSMUST00000078615 1899 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
Ufd1P70362 Hnrnpr-207ENSMUST00000148843 21452 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Ufd1P70362 Nostrin-201ENSMUST00000041865 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Ufd1P70362 Ckap5-204ENSMUST00000111338 6665 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Ufd1P70362 AC135119.1-201ENSMUST00000227935 3717 ntBASIC4.32□□□□□ -1.72
Ufd1P70362 Neat1-201ENSMUST00000173672 20771 ntBASIC4.32□□□□□ -1.72
Ufd1P70362 Gm12794-201ENSMUST00000052027 1452 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Ufd1P70362 Gm8005-201ENSMUST00000167326 1401 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Ufd1P70362 Gm37735-201ENSMUST00000193995 1406 ntBASIC4.32□□□□□ -1.72
Ufd1P70362 Tgif1-202ENSMUST00000118283 1388 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Ufd1P70362 Olfr599-202ENSMUST00000214329 2183 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Ufd1P70362 Ear-ps2-201ENSMUST00000100689 466 ntBASIC4.32□□□□□ -1.72
Ufd1P70362 Mir700-201ENSMUST00000102169 79 ntBASIC4.32□□□□□ -1.72
Ufd1P70362 n-R5s178-201ENSMUST00000104249 114 ntBASIC4.32□□□□□ -1.72
Ufd1P70362 Gm11105-201ENSMUST00000112781 478 ntBASIC4.32□□□□□ -1.72
Ufd1P70362 S100a9-202ENSMUST00000117167 519 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Ufd1P70362 Gm14885-201ENSMUST00000117969 496 ntBASIC4.32□□□□□ -1.72
Ufd1P70362 Gm13755-201ENSMUST00000118509 305 ntBASIC4.32□□□□□ -1.72
Ufd1P70362 Gm15828-201ENSMUST00000119911 522 ntBASIC4.32□□□□□ -1.72
Ufd1P70362 Gm13367-201ENSMUST00000119955 796 ntBASIC4.32□□□□□ -1.72
Ufd1P70362 2610024D14Rik-201ENSMUST00000121233 294 ntBASIC4.32□□□□□ -1.72
Ufd1P70362 Scarna13-201ENSMUST00000158164 275 ntBASIC4.32□□□□□ -1.72
Ufd1P70362 Gm23762-201ENSMUST00000158348 106 ntBASIC4.32□□□□□ -1.72
Ufd1P70362 5430401F13Rik-202ENSMUST00000161385 608 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Ufd1P70362 Gm21772-201ENSMUST00000169213 478 ntBASIC4.32□□□□□ -1.72
Ufd1P70362 Rps27-201ENSMUST00000170122 345 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Ufd1P70362 Gm17126-201ENSMUST00000172276 523 ntBASIC4.32□□□□□ -1.72
Ufd1P70362 Rps8-ps1-201ENSMUST00000172445 624 ntBASIC4.32□□□□□ -1.72
Ufd1P70362 Gm22932-201ENSMUST00000175510 72 ntBASIC4.32□□□□□ -1.72
Ufd1P70362 Rps12-ps24-201ENSMUST00000182321 381 ntBASIC4.32□□□□□ -1.72
Ufd1P70362 Gm27818-201ENSMUST00000184536 159 ntBASIC4.32□□□□□ -1.72
Ufd1P70362 Mir6418-201ENSMUST00000185075 115 ntBASIC4.32□□□□□ -1.72
Ufd1P70362 Eif4a2-224ENSMUST00000187168 1238 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Ufd1P70362 Gm28967-201ENSMUST00000187351 281 ntBASIC4.32□□□□□ -1.72
Ufd1P70362 Gm37614-201ENSMUST00000195645 210 ntBASIC4.32□□□□□ -1.72
Ufd1P70362 Mir409-201ENSMUST00000198153 79 ntBASIC4.32□□□□□ -1.72
Ufd1P70362 Gm2602-201ENSMUST00000202112 571 ntBASIC4.32□□□□□ -1.72
Ufd1P70362 Vmn1r-ps7-201ENSMUST00000202355 928 ntBASIC4.32□□□□□ -1.72
Ufd1P70362 Gm44169-201ENSMUST00000205133 359 ntTSL 2 BASIC4.32□□□□□ -1.72
Ufd1P70362 Gm45200-201ENSMUST00000207434 919 ntBASIC4.32□□□□□ -1.72
Ufd1P70362 Gm45502-201ENSMUST00000209561 252 ntTSL 3 BASIC4.32□□□□□ -1.72
Ufd1P70362 Gm45646-201ENSMUST00000210983 441 ntTSL 5 BASIC4.32□□□□□ -1.72
Ufd1P70362 AC164087.1-201ENSMUST00000215174 733 ntTSL 3 BASIC4.32□□□□□ -1.72
Ufd1P70362 AC123944.2-201ENSMUST00000215290 382 ntBASIC4.32□□□□□ -1.72
Ufd1P70362 Olfr697-202ENSMUST00000217734 1190 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Ufd1P70362 AC152062.1-201ENSMUST00000218129 386 ntBASIC4.32□□□□□ -1.72
Ufd1P70362 AC160105.1-201ENSMUST00000221931 682 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Ufd1P70362 AC154840.1-201ENSMUST00000225216 408 ntBASIC4.32□□□□□ -1.72
Ufd1P70362 AC122393.2-201ENSMUST00000226404 1093 ntBASIC4.32□□□□□ -1.72
Ufd1P70362 AC174678.3-201ENSMUST00000227568 362 ntBASIC4.32□□□□□ -1.72
Ufd1P70362 AC151902.1-201ENSMUST00000227800 375 ntBASIC4.32□□□□□ -1.72
Ufd1P70362 S100a9-201ENSMUST00000069960 512 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Ufd1P70362 Olfr1537-201ENSMUST00000073248 945 ntAPPRIS P2 BASIC4.32□□□□□ -1.72
Ufd1P70362 Gm23508-201ENSMUST00000083079 72 ntBASIC4.32□□□□□ -1.72
Ufd1P70362 Mir20a-201ENSMUST00000083508 107 ntBASIC4.32□□□□□ -1.72
Ufd1P70362 Ccl8-201ENSMUST00000009329 511 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Ufd1P70362 Mrgprb5-201ENSMUST00000094389 1037 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Ufd1P70362 Olfr1054-201ENSMUST00000099895 939 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Ufd1P70362 Olfr994-201ENSMUST00000099925 945 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Ufd1P70362 Nlrp4f-204ENSMUST00000221659 3551 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Ufd1P70362 Senp7-202ENSMUST00000089360 4802 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
Ufd1P70362 Erbin-204ENSMUST00000169083 5435 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
Ufd1P70362 Vmn1r5-203ENSMUST00000228276 3188 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Ufd1P70362 Jpx-201ENSMUST00000181020 3802 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Ufd1P70362 Pramel3-202ENSMUST00000118821 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
Ufd1P70362 Gm4954-201ENSMUST00000135069 1601 ntBASIC4.32□□□□□ -1.72
Ufd1P70362 Vmn1r72-202ENSMUST00000209638 6501 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
Ufd1P70362 Vmn1r58-201ENSMUST00000108569 10140 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Ufd1P70362 9130208D14Rik-201ENSMUST00000146911 7293 ntBASIC4.31□□□□□ -1.72
Ufd1P70362 4930539J05Rik-201ENSMUST00000181619 1406 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Ufd1P70362 Pramel-201ENSMUST00000118979 1383 ntBASIC4.31□□□□□ -1.72
Ufd1P70362 Fpgt-201ENSMUST00000066568 3518 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Ufd1P70362 Cdr1-201ENSMUST00000166381 2313 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Ufd1P70362 Igkv4-91-201ENSMUST00000103333 358 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Ufd1P70362 Igkv4-74-201ENSMUST00000103344 394 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Ufd1P70362 Gm12760-201ENSMUST00000117861 482 ntBASIC4.31□□□□□ -1.72
Ufd1P70362 Gm12465-201ENSMUST00000118591 300 ntBASIC4.31□□□□□ -1.72
Ufd1P70362 Gm14106-201ENSMUST00000119382 438 ntBASIC4.31□□□□□ -1.72
Ufd1P70362 Gm11533-201ENSMUST00000120287 477 ntBASIC4.31□□□□□ -1.72
Ufd1P70362 Gm22514-201ENSMUST00000122547 308 ntBASIC4.31□□□□□ -1.72
Ufd1P70362 Tnfaip8-203ENSMUST00000126666 906 ntTSL 2 BASIC4.31□□□□□ -1.72
Ufd1P70362 AI847159-203ENSMUST00000141786 915 ntTSL 2 BASIC4.31□□□□□ -1.72
Ufd1P70362 4930547E08Rik-201ENSMUST00000143559 541 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Ufd1P70362 1700047A11Rik-201ENSMUST00000144750 427 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Ufd1P70362 Trim30e-ps1-202ENSMUST00000151294 731 ntBASIC4.31□□□□□ -1.72
Ufd1P70362 Gm22000-201ENSMUST00000153087 730 ntTSL 5 BASIC4.31□□□□□ -1.72
Ufd1P70362 Gm25432-201ENSMUST00000158284 66 ntBASIC4.31□□□□□ -1.72
Ufd1P70362 Gm25714-201ENSMUST00000158626 296 ntBASIC4.31□□□□□ -1.72
Ufd1P70362 Gm16133-202ENSMUST00000160278 565 ntTSL 3 BASIC4.31□□□□□ -1.72
Ufd1P70362 Csn3-201ENSMUST00000001667 991 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms