Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Mbnl2-201ENSMUST00000088419 4552 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HttP42859 Ercc6-201ENSMUST00000066807 8423 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
HttP42859 Asph-211ENSMUST00000108339 6453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
HttP42859 Ap3s2-201ENSMUST00000075657 5813 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HttP42859 Fam168a-201ENSMUST00000049053 6609 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HttP42859 Med12-203ENSMUST00000117203 6816 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
HttP42859 Olfr1081-ps1-201ENSMUST00000120210 945 ntBASIC5.06□□□□□ -1.6
HttP42859 Gm12752-201ENSMUST00000121657 811 ntBASIC5.06□□□□□ -1.6
HttP42859 Gm10444-201ENSMUST00000126708 148 ntBASIC5.06□□□□□ -1.6
HttP42859 Gm3160-201ENSMUST00000128343 607 ntBASIC5.06□□□□□ -1.6
HttP42859 Gm37164-201ENSMUST00000192809 637 ntBASIC5.06□□□□□ -1.6
HttP42859 Zgrf1-202ENSMUST00000195955 3804 ntTSL 2 BASIC5.06□□□□□ -1.6
HttP42859 Pla2r1-201ENSMUST00000112525 7112 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HttP42859 Epg5-201ENSMUST00000044622 9672 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
HttP42859 Zfp644-201ENSMUST00000045466 5569 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
HttP42859 Akr1c14-202ENSMUST00000118717 3183 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
HttP42859 Gm45853-201ENSMUST00000212310 3171 ntBASIC5.06□□□□□ -1.6
HttP42859 Olfr1223-201ENSMUST00000217342 2333 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
HttP42859 Gm37855-201ENSMUST00000192571 3700 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HttP42859 Cept1-201ENSMUST00000039153 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HttP42859 Utrn-206ENSMUST00000219003 5751 ntTSL 5 BASIC5.06□□□□□ -1.6
HttP42859 D030045P18Rik-201ENSMUST00000213245 1892 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HttP42859 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
HttP42859 Nlrp4a-202ENSMUST00000119386 3215 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
HttP42859 Vmn1r12-203ENSMUST00000227581 6490 ntAPPRIS ALT2 BASIC5.06□□□□□ -1.6
HttP42859 Olfr1505-202ENSMUST00000216623 3567 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
HttP42859 Gm14916-201ENSMUST00000121904 204 ntBASIC5.06□□□□□ -1.6
HttP42859 Ighv1-77-201ENSMUST00000170551 294 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
HttP42859 Gm29459-201ENSMUST00000191359 518 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HttP42859 Gm43895-201ENSMUST00000203219 855 ntBASIC5.06□□□□□ -1.6
HttP42859 Gm7946-201ENSMUST00000203326 958 ntBASIC5.06□□□□□ -1.6
HttP42859 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HttP42859 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
HttP42859 Gm42736-201ENSMUST00000200723 1353 ntBASIC5.06□□□□□ -1.6
HttP42859 Fbxw26-201ENSMUST00000071917 1824 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HttP42859 AC158232.1-201ENSMUST00000217882 2071 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HttP42859 Myh15-201ENSMUST00000168680 6340 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
HttP42859 Vmn1r188-202ENSMUST00000226680 8374 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
HttP42859 Klhl13-204ENSMUST00000115317 3216 ntAPPRIS ALT1 TSL 5 BASIC5.06□□□□□ -1.6
HttP42859 B4galt4-203ENSMUST00000114710 837 ntTSL 3 BASIC5.06□□□□□ -1.6
HttP42859 Gm16463-201ENSMUST00000120527 721 ntBASIC5.06□□□□□ -1.6
HttP42859 Gm13484-201ENSMUST00000120738 412 ntBASIC5.06□□□□□ -1.6
HttP42859 Gm22536-201ENSMUST00000158171 134 ntBASIC5.06□□□□□ -1.6
HttP42859 Gm4248-201ENSMUST00000196905 316 ntBASIC5.06□□□□□ -1.6
HttP42859 Gm29793-201ENSMUST00000202874 460 ntBASIC5.06□□□□□ -1.6
HttP42859 Gm4574-201ENSMUST00000207804 542 ntBASIC5.06□□□□□ -1.6
HttP42859 Olfr670-201ENSMUST00000050482 939 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
HttP42859 Olfr432-203ENSMUST00000213381 4533 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
HttP42859 Ermap-206ENSMUST00000138395 4551 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HttP42859 Gm43771-201ENSMUST00000202931 1578 ntBASIC5.05□□□□□ -1.6
HttP42859 Cep162-201ENSMUST00000093802 7685 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HttP42859 AC122263.1-201ENSMUST00000228636 2805 ntBASIC5.05□□□□□ -1.6
HttP42859 Slamf7-203ENSMUST00000192195 3975 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
HttP42859 Impact-201ENSMUST00000025290 3432 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HttP42859 March1-204ENSMUST00000110253 2748 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HttP42859 Znrd1-201ENSMUST00000113669 742 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HttP42859 5033423K11Rik-201ENSMUST00000117311 787 ntBASIC5.05□□□□□ -1.6
HttP42859 Tmc4-ps-201ENSMUST00000117819 258 ntBASIC5.05□□□□□ -1.6
HttP42859 Gm11829-201ENSMUST00000121003 282 ntBASIC5.05□□□□□ -1.6
HttP42859 Olfr660-ps1-201ENSMUST00000121526 375 ntBASIC5.05□□□□□ -1.6
HttP42859 Gm24239-201ENSMUST00000157791 255 ntBASIC5.05□□□□□ -1.6
HttP42859 Mir7578-201ENSMUST00000183455 82 ntBASIC5.05□□□□□ -1.6
HttP42859 Ly6c1-203ENSMUST00000185200 540 ntTSL 2 BASIC5.05□□□□□ -1.6
HttP42859 Gm18403-201ENSMUST00000192907 529 ntBASIC5.05□□□□□ -1.6
HttP42859 Clec2f-202ENSMUST00000204981 657 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HttP42859 Olfr1353-203ENSMUST00000205193 1924 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
HttP42859 Vmn1r15-201ENSMUST00000228297 2021 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
HttP42859 Chil6-201ENSMUST00000029510 1668 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HttP42859 Btbd35f7-201ENSMUST00000105007 1960 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
HttP42859 Veph1-201ENSMUST00000029419 6431 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HttP42859 Dach2-204ENSMUST00000113380 2894 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HttP42859 Gm43313-201ENSMUST00000201398 2235 ntBASIC5.05□□□□□ -1.6
HttP42859 Gm43913-201ENSMUST00000203924 3029 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HttP42859 Gm11699-201ENSMUST00000119016 401 ntBASIC5.05□□□□□ -1.6
HttP42859 Gm15848-202ENSMUST00000125056 832 ntTSL 3 BASIC5.05□□□□□ -1.6
HttP42859 Platr16-202ENSMUST00000150529 545 ntTSL 3 BASIC5.05□□□□□ -1.6
HttP42859 Gm15414-201ENSMUST00000155217 440 ntTSL 3 BASIC5.05□□□□□ -1.6
HttP42859 Gm25907-201ENSMUST00000158486 125 ntBASIC5.05□□□□□ -1.6
HttP42859 Mir6537-201ENSMUST00000184150 110 ntBASIC5.05□□□□□ -1.6
HttP42859 Gm29240-201ENSMUST00000187248 286 ntBASIC5.05□□□□□ -1.6
HttP42859 Gm6828-201ENSMUST00000207902 1186 ntBASIC5.05□□□□□ -1.6
HttP42859 Olfr713-201ENSMUST00000098139 975 ntBASIC5.05□□□□□ -1.6
HttP42859 Olfr1500-205ENSMUST00000216287 2178 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
HttP42859 Vmn1r90-204ENSMUST00000226802 7185 ntAPPRIS P2 BASIC5.05□□□□□ -1.6
HttP42859 Muc5ac-201ENSMUST00000041924 8256 ntAPPRIS P2 TSL 5 BASIC5.05□□□□□ -1.6
HttP42859 Htt-201ENSMUST00000080036 13215 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HttP42859 1700011H14Rik-205ENSMUST00000228936 3444 ntAPPRIS P2 BASIC5.05□□□□□ -1.6
HttP42859 Gm43251-201ENSMUST00000198339 2712 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HttP42859 Ctnnd1-208ENSMUST00000111677 5789 ntTSL 5 BASIC5.05□□□□□ -1.6
HttP42859 Gm43611-201ENSMUST00000196656 4352 ntBASIC5.05□□□□□ -1.6
HttP42859 Xrn1-209ENSMUST00000190665 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
HttP42859 Vmn1r11-203ENSMUST00000228235 2376 ntAPPRIS ALT2 BASIC5.04□□□□□ -1.6
HttP42859 Hecw2-201ENSMUST00000087659 11171 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
HttP42859 Pramef25-201ENSMUST00000105766 1684 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
HttP42859 D630045J12Rik-201ENSMUST00000117556 10916 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
HttP42859 Nell1os-203ENSMUST00000152166 410 ntTSL 2 BASIC5.04□□□□□ -1.6
HttP42859 Skint1-205ENSMUST00000162885 603 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HttP42859 Gm9569-201ENSMUST00000187492 787 ntBASIC5.04□□□□□ -1.6
HttP42859 Ikzf2-209ENSMUST00000191262 1146 ntTSL 5 BASIC5.04□□□□□ -1.6
HttP42859 Gm44583-201ENSMUST00000207478 281 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 76.5 ms