Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm26925-201ENSMUST00000182470 957 ntBASIC6.11□□□□□ -1.43
Traf1P39428 Ssxb8-202ENSMUST00000185125 559 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Traf1P39428 1700072G22Rik-201ENSMUST00000189460 548 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Traf1P39428 Gm37682-201ENSMUST00000191776 522 ntBASIC6.11□□□□□ -1.43
Traf1P39428 Gm8861-201ENSMUST00000196346 832 ntBASIC6.11□□□□□ -1.43
Traf1P39428 Mir6994-201ENSMUST00000198985 73 ntBASIC6.11□□□□□ -1.43
Traf1P39428 Gm43596-201ENSMUST00000202818 884 ntBASIC6.11□□□□□ -1.43
Traf1P39428 Gm43262-201ENSMUST00000202970 1219 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Traf1P39428 Gm19921-201ENSMUST00000210505 703 ntBASIC6.11□□□□□ -1.43
Traf1P39428 Dppa3-201ENSMUST00000049644 833 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Traf1P39428 Olfr697-201ENSMUST00000050541 1047 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Traf1P39428 Olfr218-201ENSMUST00000057548 942 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Traf1P39428 Zfp781-201ENSMUST00000076281 732 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Traf1P39428 Olfr878-201ENSMUST00000086061 1065 ntBASIC6.11□□□□□ -1.43
Traf1P39428 Trmt2b-201ENSMUST00000087540 822 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Traf1P39428 Gm38351-201ENSMUST00000195466 2518 ntBASIC6.11□□□□□ -1.43
Traf1P39428 Matr3-201ENSMUST00000166793 6262 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Traf1P39428 Olfr684-202ENSMUST00000215552 3174 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Traf1P39428 Olfr684-204ENSMUST00000217136 3182 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Traf1P39428 Gm44801-201ENSMUST00000207644 2060 ntBASIC6.11□□□□□ -1.43
Traf1P39428 Ktn1-214ENSMUST00000188553 3918 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Traf1P39428 Olfr945-202ENSMUST00000216698 1864 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Traf1P39428 Zfp433-201ENSMUST00000085664 1800 ntTSL 5 BASIC6.11□□□□□ -1.43
Traf1P39428 Gm37217-201ENSMUST00000194017 3521 ntBASIC6.11□□□□□ -1.43
Traf1P39428 Cd33-203ENSMUST00000205503 5728 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
Traf1P39428 Tlr13-201ENSMUST00000040065 4060 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Traf1P39428 Olfr1438-ps1-201ENSMUST00000208398 4761 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Traf1P39428 Gm37250-201ENSMUST00000194919 2388 ntBASIC6.1□□□□□ -1.43
Traf1P39428 D030025E07Rik-203ENSMUST00000197413 2346 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Traf1P39428 Agbl2-208ENSMUST00000170320 4507 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Traf1P39428 Gm28394-201ENSMUST00000186805 1495 ntTSL 5 BASIC6.1□□□□□ -1.43
Traf1P39428 Gm28570-201ENSMUST00000188300 1495 ntTSL 5 BASIC6.1□□□□□ -1.43
Traf1P39428 Olfr586-203ENSMUST00000213281 5001 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
Traf1P39428 Olfr1140-201ENSMUST00000214723 1421 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Traf1P39428 Olfr1416-202ENSMUST00000214928 4838 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
Traf1P39428 4930435E12Rik-201ENSMUST00000122078 1368 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Traf1P39428 Olfr1472-202ENSMUST00000096201 1377 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Traf1P39428 Ktn1-203ENSMUST00000185940 3869 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
Traf1P39428 Ktn1-208ENSMUST00000187039 3875 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
Traf1P39428 Tmsb15b1-201ENSMUST00000113071 439 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
Traf1P39428 Gm12131-201ENSMUST00000117479 359 ntBASIC6.1□□□□□ -1.43
Traf1P39428 Gm17014-201ENSMUST00000120765 168 ntBASIC6.1□□□□□ -1.43
Traf1P39428 Tex35-204ENSMUST00000121911 805 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
Traf1P39428 Prdx6-ps2-201ENSMUST00000121989 694 ntBASIC6.1□□□□□ -1.43
Traf1P39428 Gm14126-201ENSMUST00000122345 395 ntBASIC6.1□□□□□ -1.43
Traf1P39428 St8sia3os-201ENSMUST00000123473 652 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Traf1P39428 Rpl39-ps-201ENSMUST00000142604 355 ntBASIC6.1□□□□□ -1.43
Traf1P39428 Gm23965-201ENSMUST00000157969 142 ntBASIC6.1□□□□□ -1.43
Traf1P39428 I0C0044D17Rik-202ENSMUST00000168045 510 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Traf1P39428 Olfr762-ps1-201ENSMUST00000172948 927 ntBASIC6.1□□□□□ -1.43
Traf1P39428 Vmn1r-ps67-201ENSMUST00000173843 691 ntBASIC6.1□□□□□ -1.43
Traf1P39428 Gm22355-201ENSMUST00000175531 96 ntBASIC6.1□□□□□ -1.43
Traf1P39428 Mir3090-201ENSMUST00000175597 87 ntBASIC6.1□□□□□ -1.43
Traf1P39428 Ly6a-203ENSMUST00000187171 853 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Traf1P39428 Gm18445-201ENSMUST00000195502 774 ntBASIC6.1□□□□□ -1.43
Traf1P39428 Gm9317-201ENSMUST00000197055 862 ntBASIC6.1□□□□□ -1.43
Traf1P39428 Gm42948-201ENSMUST00000199085 578 ntTSL 5 BASIC6.1□□□□□ -1.43
Traf1P39428 Tprkb-208ENSMUST00000200680 814 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
Traf1P39428 Gm7825-201ENSMUST00000204046 416 ntBASIC6.1□□□□□ -1.43
Traf1P39428 Gm43922-201ENSMUST00000205071 328 ntBASIC6.1□□□□□ -1.43
Traf1P39428 Gm36864-201ENSMUST00000205530 684 ntAPPRIS ALT2 TSL 3 BASIC6.1□□□□□ -1.43
Traf1P39428 Olfr1452-ps1-201ENSMUST00000208396 925 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Traf1P39428 AC153548.2-201ENSMUST00000219770 885 ntBASIC6.1□□□□□ -1.43
Traf1P39428 Apcs-201ENSMUST00000027824 971 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Traf1P39428 Pik3c2g-201ENSMUST00000032353 1206 ntTSL 5 BASIC6.1□□□□□ -1.43
Traf1P39428 Olfr1505-201ENSMUST00000081520 1103 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Traf1P39428 Mir134-201ENSMUST00000083492 71 ntBASIC6.1□□□□□ -1.43
Traf1P39428 Trim30b-201ENSMUST00000106831 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Traf1P39428 Olfr1499-202ENSMUST00000216659 1834 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Traf1P39428 Zscan4b-201ENSMUST00000168158 1754 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Traf1P39428 Snhg14-214ENSMUST00000191191 3991 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Traf1P39428 Ccnb3-201ENSMUST00000056725 4475 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Traf1P39428 Gria2-201ENSMUST00000075316 10371 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
Traf1P39428 Gm39043-201ENSMUST00000207602 2081 ntTSL 5 BASIC6.1□□□□□ -1.43
Traf1P39428 Far1-202ENSMUST00000067929 4935 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Traf1P39428 AC192616.2-201ENSMUST00000221482 3841 ntBASIC6.09□□□□□ -1.43
Traf1P39428 Amy2a3-201ENSMUST00000179314 3717 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Traf1P39428 Amy2a4-201ENSMUST00000179568 3717 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Traf1P39428 Amy2a2-201ENSMUST00000098667 3717 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Traf1P39428 Wdr17-209ENSMUST00000150488 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Traf1P39428 Gm45322-201ENSMUST00000211642 1361 ntBASIC6.09□□□□□ -1.43
Traf1P39428 AA792892-201ENSMUST00000097477 1842 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Traf1P39428 Tmem45a2-201ENSMUST00000067173 3073 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
Traf1P39428 Stau2-213ENSMUST00000159558 3901 ntTSL 5 BASIC6.09□□□□□ -1.43
Traf1P39428 Igkv6-17-201ENSMUST00000103391 377 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Traf1P39428 Olfr1094-201ENSMUST00000105211 1147 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Traf1P39428 Gm14046-201ENSMUST00000119389 509 ntBASIC6.09□□□□□ -1.43
Traf1P39428 4933416I08Rik-201ENSMUST00000125315 703 ntBASIC6.09□□□□□ -1.43
Traf1P39428 Xaf1-202ENSMUST00000140842 651 ntTSL 3 BASIC6.09□□□□□ -1.43
Traf1P39428 A630023P12Rik-204ENSMUST00000142879 524 ntTSL 3 BASIC6.09□□□□□ -1.43
Traf1P39428 Crem-235ENSMUST00000154705 529 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Traf1P39428 Gm16125-201ENSMUST00000159003 339 ntBASIC6.09□□□□□ -1.43
Traf1P39428 Gm7271-201ENSMUST00000172369 519 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Traf1P39428 1700116B05Rik-201ENSMUST00000173461 414 ntTSL 2 BASIC6.09□□□□□ -1.43
Traf1P39428 Vmn1r-ps45-201ENSMUST00000174106 955 ntBASIC6.09□□□□□ -1.43
Traf1P39428 G530012D18Rik-201ENSMUST00000178024 420 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Traf1P39428 Gm37741-201ENSMUST00000191768 1256 ntBASIC6.09□□□□□ -1.43
Traf1P39428 Gm6366-201ENSMUST00000198766 826 ntBASIC6.09□□□□□ -1.43
Traf1P39428 4930505K13Rik-201ENSMUST00000208641 546 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Traf1P39428 RMST_1.1-205ENSMUST00000218060 997 ntTSL 5 BASIC6.09□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms