Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Gm37607-201ENSMUST00000194925 2623 ntBASIC4.55□□□□□ -1.68
P20040 Gm26743-201ENSMUST00000180913 1726 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
P20040 Olfr1389-202ENSMUST00000216641 3707 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
P20040 Gm16513-201ENSMUST00000101023 2832 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
P20040 Mapk10-204ENSMUST00000112848 6761 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
P20040 1700061I17Rik-201ENSMUST00000029642 1962 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
P20040 Olfr181-201ENSMUST00000075361 1391 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
P20040 Cd33-203ENSMUST00000205503 5728 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
P20040 Gm26753-201ENSMUST00000181938 2731 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
P20040 Kcnh8-201ENSMUST00000039366 4287 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
P20040 Olfr726-205ENSMUST00000215278 1324 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
P20040 Gm5662-201ENSMUST00000101168 1840 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
P20040 Gm3696-201ENSMUST00000167923 1814 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
P20040 Trbv13-2-201ENSMUST00000103270 340 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
P20040 Gm22273-201ENSMUST00000104040 132 ntBASIC4.54□□□□□ -1.68
P20040 Casp8ap2-202ENSMUST00000108178 1189 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
P20040 Gm11866-201ENSMUST00000120209 335 ntBASIC4.54□□□□□ -1.68
P20040 Olfr637-ps1-201ENSMUST00000120386 471 ntBASIC4.54□□□□□ -1.68
P20040 Gm13488-201ENSMUST00000120419 179 ntBASIC4.54□□□□□ -1.68
P20040 Gm11804-201ENSMUST00000121663 468 ntBASIC4.54□□□□□ -1.68
P20040 Gm22106-201ENSMUST00000122544 127 ntBASIC4.54□□□□□ -1.68
P20040 Gm14003-201ENSMUST00000130919 313 ntTSL 3 BASIC4.54□□□□□ -1.68
P20040 Vmn2r-ps134-201ENSMUST00000176907 1046 ntBASIC4.54□□□□□ -1.68
P20040 AV026068-202ENSMUST00000185793 486 ntTSL 2 BASIC4.54□□□□□ -1.68
P20040 D530049I02Rik-201ENSMUST00000186582 562 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
P20040 Gm28683-201ENSMUST00000187134 615 ntBASIC4.54□□□□□ -1.68
P20040 Gm28840-205ENSMUST00000189320 615 ntBASIC4.54□□□□□ -1.68
P20040 Gm28835-203ENSMUST00000190062 615 ntBASIC4.54□□□□□ -1.68
P20040 Gm19057-201ENSMUST00000194329 1197 ntBASIC4.54□□□□□ -1.68
P20040 Gm42694-201ENSMUST00000196951 358 ntBASIC4.54□□□□□ -1.68
P20040 Mir409-201ENSMUST00000198153 79 ntBASIC4.54□□□□□ -1.68
P20040 Gm5284-201ENSMUST00000199053 903 ntBASIC4.54□□□□□ -1.68
P20040 Igkv12-66-201ENSMUST00000199305 348 ntBASIC4.54□□□□□ -1.68
P20040 Gm44795-201ENSMUST00000205496 319 ntBASIC4.54□□□□□ -1.68
P20040 Gm33601-201ENSMUST00000210001 961 ntBASIC4.54□□□□□ -1.68
P20040 Gm6906-201ENSMUST00000218014 569 ntBASIC4.54□□□□□ -1.68
P20040 Ctla2b-201ENSMUST00000021884 842 ntAPPRIS P4 TSL 1 (best) BASIC4.54□□□□□ -1.68
P20040 AC153800.1-201ENSMUST00000219212 365 ntBASIC4.54□□□□□ -1.68
P20040 AL807824.1-201ENSMUST00000223151 183 ntBASIC4.54□□□□□ -1.68
P20040 CT033778.1-201ENSMUST00000224767 767 ntBASIC4.54□□□□□ -1.68
P20040 AV026068-231ENSMUST00000225862 482 ntBASIC4.54□□□□□ -1.68
P20040 AC154436.2-201ENSMUST00000227408 208 ntBASIC4.54□□□□□ -1.68
P20040 AC154738.4-201ENSMUST00000228310 414 ntBASIC4.54□□□□□ -1.68
P20040 Olfr229-201ENSMUST00000076802 924 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
P20040 Klk1b9-201ENSMUST00000081399 870 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
P20040 Mir337-201ENSMUST00000083592 97 ntBASIC4.54□□□□□ -1.68
P20040 Mir449a-201ENSMUST00000083641 91 ntBASIC4.54□□□□□ -1.68
P20040 Olfr684-202ENSMUST00000215552 3174 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
P20040 Olfr684-204ENSMUST00000217136 3182 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
P20040 Il5ra-202ENSMUST00000204659 3575 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
P20040 Gcc2-208ENSMUST00000162860 6400 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
P20040 Olfr300-ps1-201ENSMUST00000174262 2395 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
P20040 Atp6v1g3-201ENSMUST00000027643 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
P20040 Cdh7-208ENSMUST00000146282 4776 ntTSL 3 BASIC4.53□□□□□ -1.68
P20040 Ms4a7-201ENSMUST00000025574 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
P20040 Fam83b-201ENSMUST00000098546 3136 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
P20040 D7Ertd443e-202ENSMUST00000106129 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
P20040 Gm33594-201ENSMUST00000209502 1333 ntTSL 5 BASIC4.53□□□□□ -1.68
P20040 Vmn1r71-204ENSMUST00000227702 5034 ntAPPRIS P2 BASIC4.53□□□□□ -1.68
P20040 Gm14769-201ENSMUST00000118590 432 ntBASIC4.53□□□□□ -1.68
P20040 Gm14957-201ENSMUST00000121069 817 ntBASIC4.53□□□□□ -1.68
P20040 Eif1-ps3-201ENSMUST00000121450 342 ntBASIC4.53□□□□□ -1.68
P20040 Gm15057-201ENSMUST00000121516 534 ntBASIC4.53□□□□□ -1.68
P20040 Olfr1147-ps1-201ENSMUST00000122179 913 ntBASIC4.53□□□□□ -1.68
P20040 1700061J23Rik-201ENSMUST00000141678 537 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
P20040 Gm11680-201ENSMUST00000146550 439 ntTSL 5 BASIC4.53□□□□□ -1.68
P20040 Gm22730-201ENSMUST00000158085 171 ntBASIC4.53□□□□□ -1.68
P20040 Scarna13-201ENSMUST00000158164 275 ntBASIC4.53□□□□□ -1.68
P20040 Gm25906-201ENSMUST00000158489 126 ntBASIC4.53□□□□□ -1.68
P20040 Gm15657-203ENSMUST00000163077 779 ntTSL 3 BASIC4.53□□□□□ -1.68
P20040 Kcne1-202ENSMUST00000166707 601 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
P20040 Gm3307-201ENSMUST00000176164 632 ntBASIC4.53□□□□□ -1.68
P20040 Arhgap39-209ENSMUST00000177026 371 ntTSL 5 BASIC4.53□□□□□ -1.68
P20040 Gm10784-201ENSMUST00000178715 238 ntBASIC4.53□□□□□ -1.68
P20040 Gm28017-201ENSMUST00000183434 126 ntBASIC4.53□□□□□ -1.68
P20040 Gm18529-201ENSMUST00000193025 1257 ntBASIC4.53□□□□□ -1.68
P20040 2900002M20Rik-201ENSMUST00000195754 330 ntBASIC4.53□□□□□ -1.68
P20040 Gm32051-201ENSMUST00000196818 709 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
P20040 Igkv3-8-201ENSMUST00000197635 339 ntBASIC4.53□□□□□ -1.68
P20040 Nts-201ENSMUST00000020040 1248 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
P20040 Gm43036-201ENSMUST00000200594 373 ntBASIC4.53□□□□□ -1.68
P20040 Lrrc72-201ENSMUST00000020853 660 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
P20040 AC164576.1-201ENSMUST00000218783 693 ntTSL 5 BASIC4.53□□□□□ -1.68
P20040 AC142227.2-201ENSMUST00000220675 400 ntTSL 5 BASIC4.53□□□□□ -1.68
P20040 AC160962.1-203ENSMUST00000225167 1105 ntAPPRIS P5 BASIC4.53□□□□□ -1.68
P20040 AC113031.3-201ENSMUST00000226552 190 ntBASIC4.53□□□□□ -1.68
P20040 Clec2j-201ENSMUST00000032517 515 ntBASIC4.53□□□□□ -1.68
P20040 Olfr957-201ENSMUST00000051653 936 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
P20040 Meig1-201ENSMUST00000064685 706 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
P20040 Gm23459-201ENSMUST00000083259 131 ntBASIC4.53□□□□□ -1.68
P20040 Mir129-1-201ENSMUST00000083535 73 ntBASIC4.53□□□□□ -1.68
P20040 Cyp4a31-202ENSMUST00000030486 2509 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
P20040 Gm37762-201ENSMUST00000194515 3561 ntBASIC4.53□□□□□ -1.68
P20040 Gm18163-201ENSMUST00000197877 1643 ntBASIC4.53□□□□□ -1.68
P20040 Gm44424-201ENSMUST00000203438 1826 ntBASIC4.53□□□□□ -1.68
P20040 Gm11674-201ENSMUST00000124855 3005 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
P20040 Vmn1r43-204ENSMUST00000226983 12805 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
P20040 Glmn-203ENSMUST00000100949 1759 ntTSL 1 (best) BASIC4.53□□□□□ -1.69
P20040 Abi3bp-203ENSMUST00000096013 4495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
P20040 Olfr473-202ENSMUST00000217618 2319 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 81 ms