Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm23692-201ENSMUST00000101881 160 ntBASIC5.49□□□□□ -1.53
Chmp6P0C0A3 Ighv9-4-201ENSMUST00000103482 294 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Chmp6P0C0A3 Svs3a-202ENSMUST00000109370 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Chmp6P0C0A3 Spata17-202ENSMUST00000110945 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Chmp6P0C0A3 H3f3c-201ENSMUST00000119459 411 ntBASIC5.49□□□□□ -1.53
Chmp6P0C0A3 Gm15791-201ENSMUST00000120365 319 ntBASIC5.49□□□□□ -1.53
Chmp6P0C0A3 1700007M16Rik-201ENSMUST00000129075 435 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Chmp6P0C0A3 Gm16220-201ENSMUST00000131874 405 ntTSL 3 BASIC5.49□□□□□ -1.53
Chmp6P0C0A3 Gtsf1-205ENSMUST00000141364 700 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Chmp6P0C0A3 Gm11376-201ENSMUST00000144541 231 ntTSL 5 BASIC5.49□□□□□ -1.53
Chmp6P0C0A3 1700123O12Rik-204ENSMUST00000146783 577 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Chmp6P0C0A3 Nr6a1os-202ENSMUST00000151229 525 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Chmp6P0C0A3 Gm23993-201ENSMUST00000157478 144 ntBASIC5.49□□□□□ -1.53
Chmp6P0C0A3 Gm23537-201ENSMUST00000157536 330 ntBASIC5.49□□□□□ -1.53
Chmp6P0C0A3 Gm22725-201ENSMUST00000158092 110 ntBASIC5.49□□□□□ -1.53
Chmp6P0C0A3 Gm23069-201ENSMUST00000158240 311 ntBASIC5.49□□□□□ -1.53
Chmp6P0C0A3 Gm25865-201ENSMUST00000158247 104 ntBASIC5.49□□□□□ -1.53
Chmp6P0C0A3 B230216N24Rik-204ENSMUST00000161661 719 ntTSL 2 BASIC5.49□□□□□ -1.53
Chmp6P0C0A3 Gm26318-201ENSMUST00000176507 96 ntBASIC5.49□□□□□ -1.53
Chmp6P0C0A3 Gm29161-201ENSMUST00000188250 699 ntBASIC5.49□□□□□ -1.53
Chmp6P0C0A3 Gm28468-201ENSMUST00000188536 615 ntBASIC5.49□□□□□ -1.53
Chmp6P0C0A3 Gm37190-201ENSMUST00000193580 688 ntTSL 5 BASIC5.49□□□□□ -1.53
Chmp6P0C0A3 Gm20239-201ENSMUST00000196610 982 ntBASIC5.49□□□□□ -1.53
Chmp6P0C0A3 6330419E04Rik-201ENSMUST00000203087 1263 ntBASIC5.49□□□□□ -1.53
Chmp6P0C0A3 Gm44776-201ENSMUST00000207212 381 ntBASIC5.49□□□□□ -1.53
Chmp6P0C0A3 Gm44991-201ENSMUST00000208669 479 ntTSL 3 BASIC5.49□□□□□ -1.53
Chmp6P0C0A3 AC157515.1-201ENSMUST00000220953 450 ntBASIC5.49□□□□□ -1.53
Chmp6P0C0A3 AC153153.2-201ENSMUST00000223572 411 ntBASIC5.49□□□□□ -1.53
Chmp6P0C0A3 Olfr808-202ENSMUST00000203236 4523 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
Chmp6P0C0A3 AC170999.1-201ENSMUST00000226359 1585 ntBASIC5.49□□□□□ -1.53
Chmp6P0C0A3 Inpp4b-209ENSMUST00000172031 8067 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
Chmp6P0C0A3 Serpini1-201ENSMUST00000029423 4091 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Chmp6P0C0A3 Gm3127-202ENSMUST00000171866 1758 ntAPPRIS P5 TSL 5 BASIC5.49□□□□□ -1.53
Chmp6P0C0A3 Zfp182-202ENSMUST00000115333 3130 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Chmp6P0C0A3 Akr1c20-201ENSMUST00000078239 1317 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Chmp6P0C0A3 Il6-203ENSMUST00000199183 2343 ntTSL 2 BASIC5.48□□□□□ -1.53
Chmp6P0C0A3 Olfr13-202ENSMUST00000216179 3677 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Chmp6P0C0A3 Olfr402-202ENSMUST00000216722 3566 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Chmp6P0C0A3 AC140299.2-201ENSMUST00000219546 1969 ntBASIC5.48□□□□□ -1.53
Chmp6P0C0A3 Ugt2b5-201ENSMUST00000067790 1858 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Chmp6P0C0A3 Cfap97-201ENSMUST00000034048 4619 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Chmp6P0C0A3 Gm25418-201ENSMUST00000104214 129 ntBASIC5.48□□□□□ -1.53
Chmp6P0C0A3 Gm11486-201ENSMUST00000107322 478 ntBASIC5.48□□□□□ -1.53
Chmp6P0C0A3 Gp6-201ENSMUST00000108590 965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Chmp6P0C0A3 Gm12641-201ENSMUST00000117874 985 ntBASIC5.48□□□□□ -1.53
Chmp6P0C0A3 Gm7312-201ENSMUST00000118798 469 ntBASIC5.48□□□□□ -1.53
Chmp6P0C0A3 Gm14742-201ENSMUST00000148284 381 ntTSL 3 BASIC5.48□□□□□ -1.53
Chmp6P0C0A3 Gm25389-201ENSMUST00000157340 286 ntBASIC5.48□□□□□ -1.53
Chmp6P0C0A3 Gm23354-201ENSMUST00000158426 104 ntBASIC5.48□□□□□ -1.53
Chmp6P0C0A3 Gm22530-201ENSMUST00000158820 118 ntBASIC5.48□□□□□ -1.53
Chmp6P0C0A3 Gm26907-201ENSMUST00000181794 729 ntTSL 5 BASIC5.48□□□□□ -1.53
Chmp6P0C0A3 Mir7012-201ENSMUST00000183900 64 ntBASIC5.48□□□□□ -1.53
Chmp6P0C0A3 Pou6f2-206ENSMUST00000184299 793 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Chmp6P0C0A3 Gm27355-201ENSMUST00000185045 128 ntBASIC5.48□□□□□ -1.53
Chmp6P0C0A3 Mrgprb9-ps-201ENSMUST00000188739 892 ntBASIC5.48□□□□□ -1.53
Chmp6P0C0A3 Gm42952-201ENSMUST00000196393 731 ntTSL 2 BASIC5.48□□□□□ -1.53
Chmp6P0C0A3 Arl8b-202ENSMUST00000204483 695 ntTSL 3 BASIC5.48□□□□□ -1.53
Chmp6P0C0A3 Olfr151-202ENSMUST00000221099 929 ntBASIC5.48□□□□□ -1.53
Chmp6P0C0A3 Gm6049-201ENSMUST00000222369 458 ntBASIC5.48□□□□□ -1.53
Chmp6P0C0A3 Sprr3-201ENSMUST00000058142 1222 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
Chmp6P0C0A3 Ttc39d-201ENSMUST00000053168 2022 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Chmp6P0C0A3 AC112274.1-201ENSMUST00000218957 4274 ntBASIC5.48□□□□□ -1.53
Chmp6P0C0A3 A330087D11Rik-201ENSMUST00000187265 1334 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Chmp6P0C0A3 Olfr726-208ENSMUST00000217422 1302 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Chmp6P0C0A3 AC162467.3-201ENSMUST00000219716 2172 ntBASIC5.48□□□□□ -1.53
Chmp6P0C0A3 Gm19757-201ENSMUST00000205113 2946 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Chmp6P0C0A3 Pnpla8-204ENSMUST00000143771 2974 ntTSL 5 BASIC5.47□□□□□ -1.53
Chmp6P0C0A3 Cdh12-201ENSMUST00000075132 5636 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Chmp6P0C0A3 Ncr1-202ENSMUST00000126417 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Chmp6P0C0A3 4833421K07Rik-201ENSMUST00000206146 1391 ntBASIC5.47□□□□□ -1.53
Chmp6P0C0A3 Olfr889-202ENSMUST00000217286 5673 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Chmp6P0C0A3 Gm42492-201ENSMUST00000195780 2915 ntBASIC5.47□□□□□ -1.53
Chmp6P0C0A3 Ccnb3-201ENSMUST00000056725 4475 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Chmp6P0C0A3 Cenpj-201ENSMUST00000065302 4363 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Chmp6P0C0A3 Lipe-203ENSMUST00000105177 1251 ntBASIC5.47□□□□□ -1.53
Chmp6P0C0A3 Gm14716-201ENSMUST00000120138 718 ntBASIC5.47□□□□□ -1.53
Chmp6P0C0A3 Gm13787-201ENSMUST00000120422 168 ntBASIC5.47□□□□□ -1.53
Chmp6P0C0A3 Gm15388-201ENSMUST00000121578 726 ntBASIC5.47□□□□□ -1.53
Chmp6P0C0A3 Gm11894-201ENSMUST00000121579 328 ntBASIC5.47□□□□□ -1.53
Chmp6P0C0A3 Gm23837-201ENSMUST00000122656 286 ntBASIC5.47□□□□□ -1.53
Chmp6P0C0A3 Gm14102-201ENSMUST00000147678 464 ntTSL 2 BASIC5.47□□□□□ -1.53
Chmp6P0C0A3 Hsd11b1-203ENSMUST00000160929 1256 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Chmp6P0C0A3 Gm17981-201ENSMUST00000191109 739 ntBASIC5.47□□□□□ -1.53
Chmp6P0C0A3 Gm9134-201ENSMUST00000193186 551 ntBASIC5.47□□□□□ -1.53
Chmp6P0C0A3 Gm19708-201ENSMUST00000199386 543 ntTSL 2 BASIC5.47□□□□□ -1.53
Chmp6P0C0A3 Gm42663-201ENSMUST00000199883 351 ntBASIC5.47□□□□□ -1.53
Chmp6P0C0A3 Gm44646-201ENSMUST00000205847 421 ntTSL 2 BASIC5.47□□□□□ -1.53
Chmp6P0C0A3 Gm8911-201ENSMUST00000213986 652 ntBASIC5.47□□□□□ -1.53
Chmp6P0C0A3 Gm10112-201ENSMUST00000075226 354 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Chmp6P0C0A3 Olfr248-201ENSMUST00000075329 1010 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Chmp6P0C0A3 Mir199a-2-201ENSMUST00000093618 110 ntBASIC5.47□□□□□ -1.53
Chmp6P0C0A3 Olfr1135-201ENSMUST00000099853 933 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Chmp6P0C0A3 Olfr1420-203ENSMUST00000217281 2998 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Chmp6P0C0A3 Olfr1195-202ENSMUST00000213545 2585 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Chmp6P0C0A3 AC115970.1-201ENSMUST00000218910 1758 ntBASIC5.47□□□□□ -1.53
Chmp6P0C0A3 Ptprd-217ENSMUST00000174023 4530 ntTSL 5 BASIC5.46□□□□□ -1.53
Chmp6P0C0A3 Gm37767-201ENSMUST00000193239 1834 ntBASIC5.46□□□□□ -1.53
Chmp6P0C0A3 Gm28242-201ENSMUST00000187274 1492 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
Chmp6P0C0A3 Tfpi-201ENSMUST00000028487 1492 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.53
Chmp6P0C0A3 Dctn4-201ENSMUST00000025505 3738 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 117.7 ms