Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Gm16179-201ENSMUST00000120685 373 ntBASIC5.32□□□□□ -1.56
TnfP06804 Defa-ps14-201ENSMUST00000121373 418 ntBASIC5.32□□□□□ -1.56
TnfP06804 Gm15647-201ENSMUST00000160178 691 ntTSL 3 BASIC5.32□□□□□ -1.56
TnfP06804 4930509E16Rik-201ENSMUST00000181405 1191 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TnfP06804 Gm28840-203ENSMUST00000187128 975 ntTSL 5 BASIC5.32□□□□□ -1.56
TnfP06804 Gm28097-201ENSMUST00000187333 366 ntBASIC5.32□□□□□ -1.56
TnfP06804 Gm18117-201ENSMUST00000187720 742 ntBASIC5.32□□□□□ -1.56
TnfP06804 C4bp-ps1-201ENSMUST00000189393 706 ntBASIC5.32□□□□□ -1.56
TnfP06804 Gm37492-201ENSMUST00000191948 376 ntBASIC5.32□□□□□ -1.56
TnfP06804 Gm10292-202ENSMUST00000193165 585 ntBASIC5.32□□□□□ -1.56
TnfP06804 Gm37070-201ENSMUST00000193272 460 ntBASIC5.32□□□□□ -1.56
TnfP06804 Gm37220-201ENSMUST00000195179 415 ntTSL 5 BASIC5.32□□□□□ -1.56
TnfP06804 Gm37815-201ENSMUST00000195665 411 ntTSL 5 BASIC5.32□□□□□ -1.56
TnfP06804 Gm42814-201ENSMUST00000199370 460 ntBASIC5.32□□□□□ -1.56
TnfP06804 Gm44515-201ENSMUST00000209045 379 ntTSL 5 BASIC5.32□□□□□ -1.56
TnfP06804 Gm44761-201ENSMUST00000209080 440 ntTSL 2 BASIC5.32□□□□□ -1.56
TnfP06804 Gm8189-203ENSMUST00000211159 1225 ntBASIC5.32□□□□□ -1.56
TnfP06804 AC122305.3-201ENSMUST00000214762 361 ntTSL 3 BASIC5.32□□□□□ -1.56
TnfP06804 Gm29785-201ENSMUST00000217033 383 ntBASIC5.32□□□□□ -1.56
TnfP06804 AC118230.1-201ENSMUST00000220196 656 ntBASIC5.32□□□□□ -1.56
TnfP06804 Gm8672-201ENSMUST00000221200 332 ntBASIC5.32□□□□□ -1.56
TnfP06804 AC123061.2-201ENSMUST00000226234 802 ntBASIC5.32□□□□□ -1.56
TnfP06804 Fam24a-201ENSMUST00000084505 371 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
TnfP06804 Gm37205-201ENSMUST00000194820 2736 ntBASIC5.32□□□□□ -1.56
TnfP06804 Agbl2-204ENSMUST00000111481 3448 ntAPPRIS P2 TSL 5 BASIC5.32□□□□□ -1.56
TnfP06804 AI987944-201ENSMUST00000071804 2671 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
TnfP06804 CT030159.1-201ENSMUST00000221580 2261 ntBASIC5.32□□□□□ -1.56
TnfP06804 Adgrg2-203ENSMUST00000112401 4632 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
TnfP06804 Adgrg2-204ENSMUST00000112402 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
TnfP06804 Adgrg2-205ENSMUST00000112404 4601 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
TnfP06804 Adgrg2-206ENSMUST00000112405 4634 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
TnfP06804 AC158115.2-201ENSMUST00000221804 5563 ntTSL 5 BASIC5.32□□□□□ -1.56
TnfP06804 Olfr685-202ENSMUST00000209409 3179 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
TnfP06804 Olfr843-203ENSMUST00000214267 7071 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
TnfP06804 Olfr123-203ENSMUST00000216051 2716 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
TnfP06804 Olfr1427-202ENSMUST00000215374 3342 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
TnfP06804 Gm13582-201ENSMUST00000146034 2655 ntTSL 2 BASIC5.31□□□□□ -1.56
TnfP06804 Ceacam3-201ENSMUST00000108491 3261 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
TnfP06804 Olfr191-202ENSMUST00000215647 3857 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
TnfP06804 Olfr1383-202ENSMUST00000204706 4168 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
TnfP06804 Vmn2r-ps130-201ENSMUST00000175853 2568 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
TnfP06804 Vmn2r-ps129-201ENSMUST00000177509 2568 ntBASIC5.31□□□□□ -1.56
TnfP06804 Ryr3-211ENSMUST00000208290 15468 ntAPPRIS P3 TSL 5 BASIC5.31□□□□□ -1.56
TnfP06804 Tor1aip1-210ENSMUST00000169241 3716 ntAPPRIS ALT2 TSL 3 BASIC5.31□□□□□ -1.56
TnfP06804 Gm26791-201ENSMUST00000180942 1605 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TnfP06804 AC120153.1-201ENSMUST00000226502 1311 ntBASIC5.31□□□□□ -1.56
TnfP06804 9230109A22Rik-202ENSMUST00000228644 1853 ntBASIC5.31□□□□□ -1.56
TnfP06804 Zfp143-201ENSMUST00000084727 3003 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TnfP06804 Vmn2r1-201ENSMUST00000029406 2739 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TnfP06804 Gm22020-201ENSMUST00000104358 136 ntBASIC5.31□□□□□ -1.56
TnfP06804 Gm12423-201ENSMUST00000118334 135 ntBASIC5.31□□□□□ -1.56
TnfP06804 Gm13172-201ENSMUST00000118685 256 ntBASIC5.31□□□□□ -1.56
TnfP06804 Tmem132cos-202ENSMUST00000154361 699 ntTSL 3 BASIC5.31□□□□□ -1.56
TnfP06804 Gm16321-201ENSMUST00000155184 574 ntTSL 3 BASIC5.31□□□□□ -1.56
TnfP06804 Gm15892-203ENSMUST00000156149 1001 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TnfP06804 Gm24477-201ENSMUST00000157438 103 ntBASIC5.31□□□□□ -1.56
TnfP06804 Gm24188-201ENSMUST00000157980 108 ntBASIC5.31□□□□□ -1.56
TnfP06804 Gm16125-201ENSMUST00000159003 339 ntBASIC5.31□□□□□ -1.56
TnfP06804 Gm17046-201ENSMUST00000168078 850 ntBASIC5.31□□□□□ -1.56
TnfP06804 Obox4-ps14-201ENSMUST00000177198 1127 ntBASIC5.31□□□□□ -1.56
TnfP06804 Gm26954-201ENSMUST00000182106 622 ntTSL 3 BASIC5.31□□□□□ -1.56
TnfP06804 Gm28426-201ENSMUST00000187385 620 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TnfP06804 2310043L19Rik-201ENSMUST00000189507 698 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TnfP06804 4930540E01Rik-201ENSMUST00000192569 1146 ntBASIC5.31□□□□□ -1.56
TnfP06804 Gm33206-201ENSMUST00000193544 454 ntTSL 2 BASIC5.31□□□□□ -1.56
TnfP06804 Gm43018-201ENSMUST00000198075 1275 ntBASIC5.31□□□□□ -1.56
TnfP06804 Gm42761-201ENSMUST00000201899 738 ntTSL 3 BASIC5.31□□□□□ -1.56
TnfP06804 Gm43968-201ENSMUST00000203388 389 ntBASIC5.31□□□□□ -1.56
TnfP06804 Gm44604-201ENSMUST00000205475 496 ntBASIC5.31□□□□□ -1.56
TnfP06804 Fam228b-208ENSMUST00000219898 288 ntAPPRIS ALT2 TSL 3 BASIC5.31□□□□□ -1.56
TnfP06804 9530050K03Rik-201ENSMUST00000221663 1299 ntBASIC5.31□□□□□ -1.56
TnfP06804 Tmem209-211ENSMUST00000222934 1212 ntTSL 5 BASIC5.31□□□□□ -1.56
TnfP06804 AC125484.1-201ENSMUST00000223218 234 ntBASIC5.31□□□□□ -1.56
TnfP06804 AC096628.1-201ENSMUST00000226060 641 ntBASIC5.31□□□□□ -1.56
TnfP06804 CT009600.2-201ENSMUST00000226638 481 ntBASIC5.31□□□□□ -1.56
TnfP06804 Gm42496-201ENSMUST00000197976 3241 ntBASIC5.31□□□□□ -1.56
TnfP06804 Gm19136-201ENSMUST00000190706 2067 ntBASIC5.31□□□□□ -1.56
TnfP06804 Lrrc4c-203ENSMUST00000162807 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TnfP06804 Zfp455-201ENSMUST00000117110 2556 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TnfP06804 Gm5925-201ENSMUST00000105016 1497 ntBASIC5.31□□□□□ -1.56
TnfP06804 Vmn1r196-204ENSMUST00000228382 6525 ntAPPRIS P2 BASIC5.31□□□□□ -1.56
TnfP06804 Kcnh7-201ENSMUST00000075052 13321 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TnfP06804 Egfros-201ENSMUST00000150329 4063 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TnfP06804 Serpinb9b-201ENSMUST00000006392 3253 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TnfP06804 Lipm-201ENSMUST00000025685 2701 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TnfP06804 Clk4-202ENSMUST00000109111 1427 ntTSL 2 BASIC5.31□□□□□ -1.56
TnfP06804 Chrnb3-203ENSMUST00000211104 3241 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TnfP06804 Vmn1r171-210ENSMUST00000228484 2421 ntAPPRIS ALT2 BASIC5.31□□□□□ -1.56
TnfP06804 Olfr1341-202ENSMUST00000214131 4300 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
TnfP06804 Ugt1a7c-202ENSMUST00000113135 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
TnfP06804 Gm17275-201ENSMUST00000181811 2550 ntTSL 5 BASIC5.3□□□□□ -1.56
TnfP06804 Map3k19-201ENSMUST00000061512 3936 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
TnfP06804 Olfr1192-ps1-201ENSMUST00000120518 2738 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
TnfP06804 Gm19084-201ENSMUST00000222939 1762 ntBASIC5.3□□□□□ -1.56
TnfP06804 Txndc8-201ENSMUST00000102897 620 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
TnfP06804 Igkv1-35-201ENSMUST00000103374 359 ntAPPRIS ALT2 BASIC5.3□□□□□ -1.56
TnfP06804 Gm26376-201ENSMUST00000104784 110 ntBASIC5.3□□□□□ -1.56
TnfP06804 Macrod2-203ENSMUST00000110061 887 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
TnfP06804 Klra7-204ENSMUST00000112013 1104 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
TnfP06804 Gm12285-201ENSMUST00000117347 233 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms