Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Gm25726-201ENSMUST00000104529 129 ntBASIC5.17□□□□□ -1.58
Col4a6B1AVK5 Gm15779-201ENSMUST00000117470 412 ntBASIC5.17□□□□□ -1.58
Col4a6B1AVK5 Gm14560-201ENSMUST00000118672 375 ntBASIC5.17□□□□□ -1.58
Col4a6B1AVK5 Gm6884-201ENSMUST00000119318 615 ntBASIC5.17□□□□□ -1.58
Col4a6B1AVK5 Gm15338-201ENSMUST00000151884 552 ntTSL 3 BASIC5.17□□□□□ -1.58
Col4a6B1AVK5 Gm23465-201ENSMUST00000157134 262 ntBASIC5.17□□□□□ -1.58
Col4a6B1AVK5 Gm26871-204ENSMUST00000181310 523 ntTSL 3 BASIC5.17□□□□□ -1.58
Col4a6B1AVK5 Gm37359-201ENSMUST00000195243 526 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Col4a6B1AVK5 Gm19131-201ENSMUST00000203408 789 ntBASIC5.17□□□□□ -1.58
Col4a6B1AVK5 Gm18537-201ENSMUST00000205709 989 ntBASIC5.17□□□□□ -1.58
Col4a6B1AVK5 Abca15-204ENSMUST00000207220 567 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Col4a6B1AVK5 6430710M23Rik-201ENSMUST00000210843 1191 ntBASIC5.17□□□□□ -1.58
Col4a6B1AVK5 AC153729.2-201ENSMUST00000215166 560 ntTSL 3 BASIC5.17□□□□□ -1.58
Col4a6B1AVK5 AC129597.1-201ENSMUST00000223046 1234 ntBASIC5.17□□□□□ -1.58
Col4a6B1AVK5 Resp18-201ENSMUST00000039534 748 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Col4a6B1AVK5 Mir193a-201ENSMUST00000083461 66 ntBASIC5.17□□□□□ -1.58
Col4a6B1AVK5 Pde1c-206ENSMUST00000166890 4728 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Col4a6B1AVK5 B3gnt5-201ENSMUST00000079780 4258 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Col4a6B1AVK5 Ktn1-221ENSMUST00000190535 4112 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
Col4a6B1AVK5 Kat6b-ps2-201ENSMUST00000188339 1600 ntBASIC5.17□□□□□ -1.58
Col4a6B1AVK5 Gm9700-201ENSMUST00000193786 1617 ntBASIC5.17□□□□□ -1.58
Col4a6B1AVK5 AC120347.1-201ENSMUST00000223326 1639 ntBASIC5.17□□□□□ -1.58
Col4a6B1AVK5 AC168056.3-201ENSMUST00000225395 2540 ntBASIC5.17□□□□□ -1.58
Col4a6B1AVK5 Olfr1494-202ENSMUST00000207836 2100 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
Col4a6B1AVK5 Csnk1g1-201ENSMUST00000034949 7208 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Col4a6B1AVK5 AC131743.1-201ENSMUST00000222138 4024 ntBASIC5.16□□□□□ -1.58
Col4a6B1AVK5 Olfr32-204ENSMUST00000215153 3117 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
Col4a6B1AVK5 Olfr191-202ENSMUST00000215647 3857 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
Col4a6B1AVK5 Zfp353-ps-201ENSMUST00000107130 1650 ntBASIC5.16□□□□□ -1.58
Col4a6B1AVK5 Kcnh7-201ENSMUST00000075052 13321 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Col4a6B1AVK5 Olfr1183-202ENSMUST00000213115 8258 ntTSL 5 BASIC5.16□□□□□ -1.58
Col4a6B1AVK5 Gm44250-201ENSMUST00000203092 4229 ntBASIC5.16□□□□□ -1.58
Col4a6B1AVK5 Gm9408-201ENSMUST00000197375 1505 ntBASIC5.16□□□□□ -1.58
Col4a6B1AVK5 Igkv1-135-201ENSMUST00000103303 394 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Col4a6B1AVK5 Gm13250-201ENSMUST00000117209 753 ntBASIC5.16□□□□□ -1.58
Col4a6B1AVK5 Gm7312-201ENSMUST00000118798 469 ntBASIC5.16□□□□□ -1.58
Col4a6B1AVK5 Gm11510-201ENSMUST00000120278 347 ntBASIC5.16□□□□□ -1.58
Col4a6B1AVK5 Gm12755-201ENSMUST00000122297 282 ntBASIC5.16□□□□□ -1.58
Col4a6B1AVK5 4930547E08Rik-201ENSMUST00000143559 541 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Col4a6B1AVK5 Gm23046-201ENSMUST00000158369 284 ntBASIC5.16□□□□□ -1.58
Col4a6B1AVK5 H2al2c-201ENSMUST00000163651 336 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Col4a6B1AVK5 H2al2b-201ENSMUST00000168551 336 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Col4a6B1AVK5 Prl8a2-201ENSMUST00000018403 939 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
Col4a6B1AVK5 Gm7967-201ENSMUST00000190991 399 ntTSL 3 BASIC5.16□□□□□ -1.58
Col4a6B1AVK5 Gm18752-202ENSMUST00000193627 587 ntTSL 3 BASIC5.16□□□□□ -1.58
Col4a6B1AVK5 Gm44852-201ENSMUST00000207950 369 ntBASIC5.16□□□□□ -1.58
Col4a6B1AVK5 AC098742.1-201ENSMUST00000227945 373 ntBASIC5.16□□□□□ -1.58
Col4a6B1AVK5 H2al3-201ENSMUST00000057113 553 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Col4a6B1AVK5 Gm13057-201ENSMUST00000105776 2093 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Col4a6B1AVK5 Ank3-240ENSMUST00000183169 6870 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
Col4a6B1AVK5 Ect2-202ENSMUST00000108298 4024 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Col4a6B1AVK5 Vmn1r39-201ENSMUST00000226217 2258 ntAPPRIS P2 BASIC5.16□□□□□ -1.58
Col4a6B1AVK5 Vmn1r39-204ENSMUST00000227555 2297 ntAPPRIS P2 BASIC5.16□□□□□ -1.58
Col4a6B1AVK5 Vmn1r39-205ENSMUST00000228008 2283 ntAPPRIS ALT2 BASIC5.16□□□□□ -1.58
Col4a6B1AVK5 Zfp101-201ENSMUST00000167107 2735 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Col4a6B1AVK5 Tcf7l2-202ENSMUST00000061496 4053 ntAPPRIS P3 TSL 5 BASIC5.16□□□□□ -1.58
Col4a6B1AVK5 Bcap29-202ENSMUST00000177962 6155 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Col4a6B1AVK5 Gm38257-201ENSMUST00000195881 2761 ntBASIC5.16□□□□□ -1.58
Col4a6B1AVK5 Olfr1353-201ENSMUST00000039718 1992 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.58
Col4a6B1AVK5 Cyp3a57-201ENSMUST00000079268 1986 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
Col4a6B1AVK5 Zfp760-201ENSMUST00000073312 4209 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Col4a6B1AVK5 Slc39a12-202ENSMUST00000114731 2648 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
Col4a6B1AVK5 Traj50-201ENSMUST00000103693 63 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
Col4a6B1AVK5 Gm24403-201ENSMUST00000104616 130 ntBASIC5.15□□□□□ -1.58
Col4a6B1AVK5 B4galt4-203ENSMUST00000114710 837 ntTSL 3 BASIC5.15□□□□□ -1.58
Col4a6B1AVK5 Olfr1149-ps1-201ENSMUST00000118232 691 ntBASIC5.15□□□□□ -1.58
Col4a6B1AVK5 Gm13815-201ENSMUST00000119963 412 ntBASIC5.15□□□□□ -1.58
Col4a6B1AVK5 Gm12752-201ENSMUST00000121657 811 ntBASIC5.15□□□□□ -1.58
Col4a6B1AVK5 Gm24730-201ENSMUST00000158228 117 ntBASIC5.15□□□□□ -1.58
Col4a6B1AVK5 Gm16107-201ENSMUST00000162523 862 ntBASIC5.15□□□□□ -1.58
Col4a6B1AVK5 Vmn1r57-201ENSMUST00000170780 933 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
Col4a6B1AVK5 Gm22177-201ENSMUST00000175002 158 ntBASIC5.15□□□□□ -1.58
Col4a6B1AVK5 Gm27818-201ENSMUST00000184536 159 ntBASIC5.15□□□□□ -1.58
Col4a6B1AVK5 Gm28859-201ENSMUST00000186650 616 ntBASIC5.15□□□□□ -1.58
Col4a6B1AVK5 Gm29000-207ENSMUST00000190152 1160 ntTSL 5 BASIC5.15□□□□□ -1.58
Col4a6B1AVK5 Gm9057-201ENSMUST00000198791 296 ntBASIC5.15□□□□□ -1.58
Col4a6B1AVK5 6030400A10Rik-201ENSMUST00000199734 1212 ntBASIC5.15□□□□□ -1.58
Col4a6B1AVK5 Gm40323-201ENSMUST00000200649 645 ntTSL 2 BASIC5.15□□□□□ -1.58
Col4a6B1AVK5 9330118I20Rik-201ENSMUST00000203390 1066 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
Col4a6B1AVK5 Olfr114-202ENSMUST00000214871 1256 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
Col4a6B1AVK5 Gm32171-201ENSMUST00000217419 1043 ntTSL 5 BASIC5.15□□□□□ -1.58
Col4a6B1AVK5 AC121804.1-201ENSMUST00000221016 394 ntBASIC5.15□□□□□ -1.58
Col4a6B1AVK5 Prl2c2-203ENSMUST00000221612 596 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
Col4a6B1AVK5 AC132112.1-201ENSMUST00000226354 505 ntBASIC5.15□□□□□ -1.58
Col4a6B1AVK5 Gm23928-201ENSMUST00000082469 145 ntBASIC5.15□□□□□ -1.58
Col4a6B1AVK5 Gm10705-201ENSMUST00000098980 461 ntBASIC5.15□□□□□ -1.58
Col4a6B1AVK5 Kcnrg-202ENSMUST00000225582 1821 ntAPPRIS ALT2 BASIC5.15□□□□□ -1.58
Col4a6B1AVK5 Gm21704-201ENSMUST00000169382 1573 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
Col4a6B1AVK5 Rbmy-202ENSMUST00000171534 1573 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Col4a6B1AVK5 Gm21708-202ENSMUST00000188091 1573 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Col4a6B1AVK5 Gm10256-203ENSMUST00000189964 1573 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Col4a6B1AVK5 Ttc33-202ENSMUST00000081640 1583 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
Col4a6B1AVK5 AC156569.1-201ENSMUST00000222020 3841 ntBASIC5.15□□□□□ -1.58
Col4a6B1AVK5 Rlf-203ENSMUST00000168615 6585 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
Col4a6B1AVK5 Lipm-201ENSMUST00000025685 2701 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Col4a6B1AVK5 Clmn-201ENSMUST00000109936 11866 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
Col4a6B1AVK5 Hivep3-202ENSMUST00000106307 11838 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Col4a6B1AVK5 Cdk5rap2-206ENSMUST00000144099 11847 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Col4a6B1AVK5 9830107B12Rik-201ENSMUST00000063481 3639 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Col4a6B1AVK5 Olfr390-204ENSMUST00000215161 3740 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 73.4 ms